mRNA_H-canaliculatus_F_contig13210.2645.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig13210.2645.1 vs. uniprot
Match: A0A6H5JI36_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JI36_9PHAE) HSP 1 Score: 280 bits (717), Expect = 3.400e-90 Identity = 122/150 (81.33%), Postives = 132/150 (88.00%), Query Frame = 1
Query: 1 GHLEFFLCNAEDLSDPEGVVTQGCFNMHPLDRAEDDGDASPIDPDHRGRYYVDPTCRAEETDQTKLPGAVYGDVVTARYKLPDGVTCDHCIVQMVYYTGNSCKHPGYDDFNPPSWPSECAPTKADWVQTSLGMCGMDGRYPEEFWNCADI 450
GHLEFF+CNAED+SDP+GVVTQGCFNMHPLDRA+DDGDASPIDPDH GRYY+DP CRA ETDQ LPGA GDV TARYKLP G+TC CI+QMVYYTGN+CKHPGYD+F+P S P CAPTK DWVQT LGMCG DGRYPEEFWNCADI
Sbjct: 214 GHLEFFICNAEDMSDPDGVVTQGCFNMHPLDRADDDGDASPIDPDHIGRYYLDPPCRAGETDQDTLPGAYPGDVATARYKLPSGLTCSRCILQMVYYTGNACKHPGYDEFDPVSVPDGCAPTKEDWVQTQLGMCGEDGRYPEEFWNCADI 363
BLAST of mRNA_H-canaliculatus_F_contig13210.2645.1 vs. uniprot
Match: D7FP25_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP25_ECTSI) HSP 1 Score: 232 bits (592), Expect = 8.350e-73 Identity = 104/153 (67.97%), Postives = 121/153 (79.08%), Query Frame = 1
Query: 1 GHLEFFLCNAEDLSD-PEGVVTQGCFNMHPLDRAEDDGDASPIDPDHRGRYYVDPTCRAEETDQTKLPGAVYGDVVTARYKLPDGVTCDHCIVQMVYYTGNSCKHPGYDDFNPPSWPSECAPTKADWVQTSLGM-CGMDGRYPEEFWNCADIS 453
GH+E FLC+A+DL D P+ VVTQ CFN +PLDRAEDD SPIDP +RGR+ +DP CRA ETDQ LPGA GDV TAR++LP GVTC+ C+VQMVYYTGNSCKH GY +FNPPSWPS CAP+KADW+ +G CG YPEEFWNCAD+S
Sbjct: 97 GHVEMFLCDADDLPDGPDSVVTQSCFNEYPLDRAEDDEFNSPIDPLNRGRFILDPPCRASETDQELLPGAFAGDVATARFQLPQGVTCERCVVQMVYYTGNSCKHQGYAEFNPPSWPSSCAPSKADWINEIVGQHCGDGDAYPEEFWNCADVS 249
BLAST of mRNA_H-canaliculatus_F_contig13210.2645.1 vs. uniprot
Match: D8LD67_ECTSI (EsV-1-166 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD67_ECTSI) HSP 1 Score: 235 bits (599), Expect = 1.140e-72 Identity = 102/152 (67.11%), Postives = 120/152 (78.95%), Query Frame = 1
Query: 1 GHLEFFLCNAEDLSD-PEGVVTQGCFNMHPLDRAEDDGDASPIDPDHRGRYYVDPTCRAEETDQTKLPGAVYGDVVTARYKLPDGVTCDHCIVQMVYYTGNSCKHPGYDDFNPPSWPSECAPTKADWVQTSLGMCGMDGRYPEEFWNCADIS 453
GH+E FLC+A+DL D P+ VVTQ CFN +PLDRAEDD PIDP +RGR+ +DP CRA ETDQ LPGA GDV TAR++LP GVTC+ C+VQM YYTGNSCKH GY +FNPPSWPS CAP+KADW+ ++G CG YPEEFWNCAD+S
Sbjct: 146 GHVEMFLCDADDLPDGPDSVVTQSCFNEYPLDRAEDDEFNGPIDPLNRGRFILDPPCRASETDQELLPGAFAGDVATARFQLPQGVTCERCVVQMAYYTGNSCKHQGYAEFNPPSWPSSCAPSKADWINEAVGQCGDGDAYPEEFWNCADVS 297
BLAST of mRNA_H-canaliculatus_F_contig13210.2645.1 vs. uniprot
Match: D8LM93_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM93_ECTSI) HSP 1 Score: 225 bits (573), Expect = 1.340e-70 Identity = 98/152 (64.47%), Postives = 114/152 (75.00%), Query Frame = 1
Query: 1 GHLEFFLCNAEDL-SDPEGVVTQGCFNMHPLDRAEDDGDASPIDPDHRGRYYVDPTCRAEETDQTKLPGAVYGDVVTARYKLPDGVTCDHCIVQMVYYTGNSCKHPGYDDFNPPSWPSECAPTKADWVQTSLGMCGMDGRYPEEFWNCADIS 453
GH+E FLCNA +L P+ VTQ CFN HPLDRA+DD P DPD+ GR+ +DP CRA ETDQ L GA DV TAR+KLP G++C+ C+VQMVYYTGNSCKH GY +FNPPSWPS CAP+KADW+ +G CG YPEEFWNCADIS
Sbjct: 149 GHVEMFLCNAANLPGGPDSTVTQSCFNEHPLDRADDDEFNGPADPDNTGRFILDPPCRASETDQALLDGAYPSDVATARFKLPQGLSCERCVVQMVYYTGNSCKHQGYAEFNPPSWPSSCAPSKADWINEVVGQCGDGDAYPEEFWNCADIS 300
BLAST of mRNA_H-canaliculatus_F_contig13210.2645.1 vs. uniprot
Match: A0A6H5KD35_9PHAE (CBM1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD35_9PHAE) HSP 1 Score: 223 bits (569), Expect = 1.680e-68 Identity = 98/152 (64.47%), Postives = 118/152 (77.63%), Query Frame = 1
Query: 1 GHLEFFLCNAEDLSD-PEGVVTQGCFNMHPLDRAEDDGDASPIDPDHRGRYYVDPTCRAEETDQTKLPGAVYGDVVTARYKLPDGVTCDHCIVQMVYYTGNSCKHPGYDDFNPPSWPSECAPTKADWVQTSLGMCGMDGRYPEEFWNCADIS 453
GH+E FLC+A+DL D P+ VVTQ CFN HPLDRAEDD PIDP +RGR+ +DP CRA ETDQ +PGA GDV TAR++LP GVTC+ C+VQM Y+ NSCKH GY +FNPPSWP CAP+KADW++ ++G CG YPEEFWNCAD+S
Sbjct: 117 GHVEMFLCDADDLPDGPDSVVTQSCFNEHPLDRAEDDEFNGPIDPLNRGRFILDPPCRASETDQELVPGAFPGDVATARFQLPQGVTCERCVVQMAYW--NSCKHQGYAEFNPPSWPGSCAPSKADWIKEAVGQCGDGDAYPEEFWNCADVS 266
BLAST of mRNA_H-canaliculatus_F_contig13210.2645.1 vs. uniprot
Match: D8LM92_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM92_ECTSI) HSP 1 Score: 228 bits (580), Expect = 5.980e-68 Identity = 100/152 (65.79%), Postives = 115/152 (75.66%), Query Frame = 1
Query: 1 GHLEFFLCNAEDL-SDPEGVVTQGCFNMHPLDRAEDDGDASPIDPDHRGRYYVDPTCRAEETDQTKLPGAVYGDVVTARYKLPDGVTCDHCIVQMVYYTGNSCKHPGYDDFNPPSWPSECAPTKADWVQTSLGMCGMDGRYPEEFWNCADIS 453
GH+E FLC+A+DL P+ VTQ CFN HPLDR +DD SPIDP + GR+ +DP CRA ETDQ L GA GDV TAR+KLP G+TC+ C+VQMVYYTGNSCKH GY +FNP SWPS CAPTKADW+ +G CG YPEEFWNCADIS
Sbjct: 148 GHVEMFLCDADDLPGGPDSTVTQSCFNEHPLDRVDDDDFNSPIDPSNTGRFILDPPCRASETDQEMLDGAFPGDVATARFKLPQGLTCERCVVQMVYYTGNSCKHQGYAEFNPESWPSSCAPTKADWINEVVGHCGDGDAYPEEFWNCADIS 299
BLAST of mRNA_H-canaliculatus_F_contig13210.2645.1 vs. uniprot
Match: D7G4D7_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4D7_ECTSI) HSP 1 Score: 219 bits (558), Expect = 6.890e-68 Identity = 92/151 (60.93%), Postives = 115/151 (76.16%), Query Frame = 1
Query: 1 GHLEFFLCNAEDLSDPEGVVTQGCFNMHPLDRAEDDGDASPIDPDHRGRYYVDPTCRAEETDQTKLPGAVYGDVVTARYKLPDGVTCDHCIVQMVYYTGNSCKHPGYDDFNPPSWPSECAPTKADWVQTSLGMCGMDGRYPEEFWNCADIS 453
GH+EFF+CNA+++ DP+G+ Q CFN +PL RAE D + SPIDP++ GRYYVDP CR ETDQTK GA G V+ A Y+LP+G+TCD CI+QM YYTGNSCKH GY++F P SWPS CAP K DW++ +CG +G YPEEFW CAD +
Sbjct: 125 GHVEFFICNADEMEDPDGIANQECFNNYPLTRAEGDDENSPIDPNYPGRYYVDPKCREGETDQTKPEGAQDGYVIHASYQLPEGLTCDRCILQMNYYTGNSCKHVGYEEFEPASWPSACAPEKHDWIELDRYLCGENGSYPEEFWACADFA 275
BLAST of mRNA_H-canaliculatus_F_contig13210.2645.1 vs. uniprot
Match: D8LMS9_ECTSI (EsV-1-166 n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LMS9_ECTSI) HSP 1 Score: 220 bits (561), Expect = 3.330e-67 Identity = 94/151 (62.25%), Postives = 117/151 (77.48%), Query Frame = 1
Query: 1 GHLEFFLCNAEDLSDPEGVVTQGCFNMHPLDRAEDDGDASPIDPDHRGRYYVDPTCRAEETDQTKLPGAVYGDVVTARYKLPDGVTCDHCIVQMVYYTGNSCKHPGYDDFNPPSWPSECAPTKADWVQTSLGMCGMDGRYPEEFWNCADIS 453
GH EFF+CN +D+ DP+GV TQ CFNMHPL RA+DDGDASPIDP++ GRYYVDP CR EET+Q+ ++ G + RY LPD + C+HCI+QMVYYTGN+CKH GY++FNP SWPS CAP K DW++ +CG G+YPEEFW C+D S
Sbjct: 154 GHCEFFVCNTDDMDDPDGVPTQECFNMHPLTRADDDGDASPIDPNYPGRYYVDPECREEETEQSS--NSIEGYNIKMRYVLPD-IECEHCILQMVYYTGNTCKHIGYEEFNPTSWPSSCAPNKWDWIELDRYVCGTRGQYPEEFWACSDFS 301
BLAST of mRNA_H-canaliculatus_F_contig13210.2645.1 vs. uniprot
Match: D8LMF4_ECTSI (EsV-1-166 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMF4_ECTSI) HSP 1 Score: 220 bits (561), Expect = 1.030e-66 Identity = 99/154 (64.29%), Postives = 116/154 (75.32%), Query Frame = 1
Query: 1 GHLEFFLCNAEDLSDPEG---VVTQGCFNMHPLDRAEDDGDASPIDPDHRGRYYVDPTCRAEETDQTKLPGAVYGDVVTARYKLPDGVTCDHCIVQMVYYTGNSCKHPGYDDFNPPSWPSECAPTKADWVQTSLGMCGMDGRYPEEFWNCADIS 453
GH+E FLC+ DL PEG +VTQ CFN +PLDRA DD PIDP+++GR+ +DP CRA ETDQ + GA GDV TARY+LP+GV CD C+VQMVYYTGNSCKH GY +FNP SWPS CAP+KADW+ +G CG YPEEFWNCADIS
Sbjct: 153 GHVEAFLCDTADL--PEGEDSIVTQSCFNDYPLDRAIDDEFNGPIDPEYKGRFILDPPCRASETDQDLVEGAYPGDVATARYQLPEGVVCDRCVVQMVYYTGNSCKHEGYAEFNPESWPSSCAPSKADWINEVVGQCGDGDAYPEEFWNCADIS 304
BLAST of mRNA_H-canaliculatus_F_contig13210.2645.1 vs. uniprot
Match: A0A6H5KTY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTY6_9PHAE) HSP 1 Score: 227 bits (578), Expect = 1.290e-66 Identity = 100/152 (65.79%), Postives = 115/152 (75.66%), Query Frame = 1
Query: 1 GHLEFFLCNAEDL-SDPEGVVTQGCFNMHPLDRAEDDGDASPIDPDHRGRYYVDPTCRAEETDQTKLPGAVYGDVVTARYKLPDGVTCDHCIVQMVYYTGNSCKHPGYDDFNPPSWPSECAPTKADWVQTSLGMCGMDGRYPEEFWNCADIS 453
GH+E FLC+A DL P+ VTQ CFN HPLDR +DD SPIDP + GR+ +DP CRA ETDQ L GA GDV TAR+KLP+GV+C+ C+VQMVYYTGNSCKH GY +FNP SWPS CAPTKADW+ +G CG YPEEFWNCADIS
Sbjct: 148 GHVEMFLCDANDLPGGPDSTVTQSCFNEHPLDRVDDDYFNSPIDPSNTGRFILDPPCRASETDQELLDGAFPGDVATARFKLPEGVSCERCVVQMVYYTGNSCKHQGYAEFNPDSWPSSCAPTKADWINELVGFCGDGDAYPEEFWNCADIS 299 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13210.2645.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig13210.2645.1 >prot_H-canaliculatus_F_contig13210.2645.1 ID=prot_H-canaliculatus_F_contig13210.2645.1|Name=mRNA_H-canaliculatus_F_contig13210.2645.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=152bp GHLEFFLCNAEDLSDPEGVVTQGCFNMHPLDRAEDDGDASPIDPDHRGRYback to top mRNA from alignment at H-canaliculatus_F_contig13210:1387..3170- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig13210.2645.1 ID=mRNA_H-canaliculatus_F_contig13210.2645.1|Name=mRNA_H-canaliculatus_F_contig13210.2645.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1784bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13210:1387..3170- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig13210:1387..3170- >mRNA_H-canaliculatus_F_contig13210.2645.1 ID=mRNA_H-canaliculatus_F_contig13210.2645.1|Name=mRNA_H-canaliculatus_F_contig13210.2645.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=912bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13210:1387..3170- (Hapterophycus canaliculatus Oshoro5f female)back to top |