mRNA_H-canaliculatus_F_contig1321.2643.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig1321.2643.1
Unique NamemRNA_H-canaliculatus_F_contig1321.2643.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1321.2643.1 vs. uniprot
Match: D7FNW3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNW3_ECTSI)

HSP 1 Score: 193 bits (491), Expect = 1.340e-53
Identity = 107/168 (63.69%), Postives = 118/168 (70.24%), Query Frame = 3 
Query:  417 QDATLFSVMELALDFLGSSTQWVVASAVGVALVTRADVGTLVYVVGSLLNAVFSKVLKKTINQVRPDGARLSDPGMPSSHAMSLFYLGTYLVIGLQNHGVWTLDSSLPQWPLGVTETQSLLGVYAVTASLWRVKAGFHTLSQVFVGAAVGTVDAVLWYRFCQAHFLSQ 920
            +D TL + +EL LD LGSSTQW VA AVGVAL+TRADV TLVYV+GSL+NAVFSKVLKKTINQVRPDGA+LSDPGMPSSHAM                                  TQ+LLG+YA+TASLWRVKAGFHTL QV VGAAVG VDAVLWY  C  + LSQ
Sbjct:    3 RDKTLLAGIELGLDVLGSSTQWAVAGAVGVALITRADVDTLVYVLGSLINAVFSKVLKKTINQVRPDGAQLSDPGMPSSHAM----------------------------------TQTLLGMYALTASLWRVKAGFHTLPQVAVGAAVGAVDAVLWYHLCHPYLLSQ 136
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BLAST of mRNA_H-canaliculatus_F_contig1321.2643.1 vs. uniprot
Match: A0A4D9CV92_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CV92_9STRA)

HSP 1 Score: 137 bits (344), Expect = 3.480e-33
Identity = 78/176 (44.32%), Postives = 104/176 (59.09%), Query Frame = 3 
Query:  510 LVTRADVGTLVYVVGSLLNAVFSKVLKKTINQVRPDGARLSDPGMPSSHAMSLFYLGTYLVIGL-QNHGVWTLDSSLPQWPLGVTETQSLLGVYAVTASLWRVKAGFHTLSQVFVGAAVGTVDAVLWYRFCQAHFLSQVEAF---FWGPHIPVELAVGVCVVTFFTFGNAQRKMSK 1025
            L+ R D   + + VG++LNA+  K+LK+ I + RPDGA L DPGMPSSHAM+LFY+  +L   L Q  G+  L    P WPL V  T +L G+Y   AS WRV +G HT +Q+ +GA VG    + W R C      QV AF   + G  +PV   VGV VV   T G+ +RK++K
Sbjct:    2 LLVRRDAAIVNFTVGAILNAMLGKILKRLIKEARPDGAVLEDPGMPSSHAMALFYMSAFLGSALCQKRGIGMLP---PWWPLDVLPTIALGGLYVSVASAWRVFSGLHTSAQILIGAGVGGGVGLAWERECAMVCDHQVGAFLARYKGGQVPVVYLVGVMVVGALTVGSVERKIAK 174
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BLAST of mRNA_H-canaliculatus_F_contig1321.2643.1 vs. uniprot
Match: K8Z811_NANGC (Dolichyldiphosphatase (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z811_NANGC)

HSP 1 Score: 133 bits (335), Expect = 4.920e-31
Identity = 72/149 (48.32%), Postives = 92/149 (61.74%), Query Frame = 3 
Query:  450 ALDFLGSSTQWVVASAVGVALVTRADVGTLVYVVGSLLNAVFSKVLKKTINQVRPDGARLSDPGMPSSHAMSLFYLGTYLVIGL-QNHGVWTLDSSLPQWPLGVTETQSLLGVYAVTASLWRVKAGFHTLSQVFVGAAVGTVDAVLWYR 893
            A   LG ST+W VAS V V L+ R D   + + VG++LNA+  K+LK+ I + RPDGA L DPGMPSSHAM+LFY+  +L   L Q  G+  L    P WPL V  T +L G+Y   AS WRV +G HT +Q+ VGA VG    + W R
Sbjct:  126 AFQLLGKSTRWTVASLVAVMLLVRRDAAIVNFTVGAILNAMLGKILKRLIKEARPDGAVLEDPGMPSSHAMALFYMSAFLGSALCQKRGIGVLP---PWWPLDVLPTIALGGLYVSVASAWRVFSGLHTSAQILVGAGVGGGVGLAWER 271
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BLAST of mRNA_H-canaliculatus_F_contig1321.2643.1 vs. uniprot
Match: A0A7S2WS98_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WS98_9STRA)

HSP 1 Score: 128 bits (322), Expect = 3.490e-30
Identity = 75/152 (49.34%), Postives = 98/152 (64.47%), Query Frame = 3 
Query:  462 LGSSTQWVVASAVGVALVTRADVGTLVYVVGSLLNAVFSKVLKKTINQVRPDGARLSDPGMPSSHAMSLFYLGTYLVIGLQNHGVWTLDSS--LPQWPLGVTETQS-LLGVYAVTASLWRVKAGFHTLSQVFVGAAVGTVDAVLWYRFCQAH 908
            +GSS + +V SAV VAL+ R D   L +V+G+LLNAV +KVLK+ INQ RP+GAR  DPGMPSSHA SLF+L ++L    Q    W    S  LP +  G +   + LL  YA  AS WRV AG+HT  QV VG  VG++  +LW+  C++H
Sbjct:   45 IGSSARILVGSAVAVALLVRRDAAALGWVLGALLNAVLAKVLKRLINQSRPEGARSDDPGMPSSHAQSLFFLASFLAAAAQ---FWEPLPSPLLPTYTAGHSAGIAVLLLAYAWLASAWRVGAGYHTAPQVLVGGVVGSLTGMLWFFACRSH 193
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BLAST of mRNA_H-canaliculatus_F_contig1321.2643.1 vs. uniprot
Match: A0A6H5KI89_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI89_9PHAE)

HSP 1 Score: 127 bits (318), Expect = 3.490e-29
Identity = 100/228 (43.86%), Postives = 118/228 (51.75%), Query Frame = 3 
Query:   51 MRHSGLLPLFALVSSREATCFVVRSPSCQRKQPCGDRVVKCNPVDITTSRDRSNDGGCCLRRVLHPLTLHTEAVPRARGGQVLHGSSHNSGNSPEFDAAAATSSSSRVTA------------------------GASVPDATTMVKQDATLFSVMELALDFLGSSTQWVVASAVGVALVTRADVGTLVYVVGSLLNAVFSKVLKKTINQVRPDGARLSDPGMPSSHAM 662
            M   G   L  L S R A+CF+ R P+ Q +    D    CN V+   +   +   GC L      L L      R R  QV H  S         + A   SSS                               ++ D  TM + D TL + +EL LD LGSSTQWVVA AVGVAL+TRADV TLVYV+GSL+NAVFSKVLKK INQVRP+GA+LSDPGMPSSHAM
Sbjct:    1 MHRIGHALLIGLASLRLASCFI-RGPALQHRW-FSDLATNCNDVNTPAACVSAERVGCPL------LLLGIAHTSRVRVKQVAHIVSR--------EQAFNDSSSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXAETLADGATMGR-DKTLPAGIELGLDVLGSSTQWVVAGAVGVALITRADVDTLVYVLGSLINAVFSKVLKKNINQVRPEGAQLSDPGMPSSHAM 211
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BLAST of mRNA_H-canaliculatus_F_contig1321.2643.1 vs. uniprot
Match: A0A6U4CT78_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4CT78_9STRA)

HSP 1 Score: 124 bits (310), Expect = 3.880e-28
Identity = 79/206 (38.35%), Postives = 110/206 (53.40%), Query Frame = 3 
Query:  444 ELALDFLGSSTQWVVASAVGVALVTRADVGTLVYVVGSLLNAVFSKVLKKTINQVRPDGARLSDPGMPSSHAMSLFYLGTYL---VIGLQNHGVWTLDSSLPQ--WPLGVTETQSLLGVYAVTASLWRVKAGFHTLSQVFVGAAVGTVDAVLWYRFCQAHFLSQVEAFFWGPHIPVELAVGVCVVTFFTFGNAQRKMSKIFARKKN 1046
            E A   +G ST+W V+  V  ALV R DV  L +VVGS+LNA+ SK+LK+ +NQ RPD A  +DPGMPSSHA SLF++G Y    V              LP    P        ++  Y    ++WRV  G+HTL QV VGA VG+  A+ WY  C+      ++AF   P +P      + V    T G    K++++ A++K+
Sbjct:   29 ERAAYAIGRSTKWTVSGGVAAALVLRRDVPALAFVVGSVLNALSSKLLKRLLNQKRPDTATQTDPGMPSSHAQSLFFIGGYAMRAVAATPAPEALAAALGLPAKAGPGLQLALNPVILAYISYCAVWRVAVGYHTLPQVAVGAVVGSAAALGWYAACRPLVHDFLKAFVPEP-LPFFAVAAIGVGGVLTVGKVGEKLNRLLAKRKD 233
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BLAST of mRNA_H-canaliculatus_F_contig1321.2643.1 vs. uniprot
Match: A0A0G4EJI9_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EJI9_VITBC)

HSP 1 Score: 125 bits (314), Expect = 1.380e-27
Identity = 76/195 (38.97%), Postives = 107/195 (54.87%), Query Frame = 3 
Query:  465 GSSTQWVVASAVGVALVTRADVGTLVYVVGSLLNAVFSKVLKKTINQVRPDGARLSDPGMPSSHAMSLFYLGTYLVIGLQNHGVWTLDSSLPQWPLGVTETQSLLGVYAVTASLWRVKAGFHTLSQVFVGAAVGTVDAVLWYRFCQAHFLSQVEAFF----WGPHIPVELAVGVCVVTFFTFGNAQRKMSKIFAR 1037
            G S +++V+  V +ALV R D    V+V+GSLLNAV  KVLK+  N  RPD A +SDPGMPSSHAMSL +L   L+       +   D     W L       L+  YA+ +++WRV+A  HT  QV VG AVG    ++WY+  +      +E  F      P +P    VG+C++   T G+ +RK+ K+  R
Sbjct:  134 GLSARFLVSGLVFLALVMRRDAAVTVWVIGSLLNAVLGKVLKRLFNHSRPDEATVSDPGMPSSHAMSLSFLSVSLI-----RAIIDADRLPAWWRLDKRWAVVLVSSYALLSAVWRVRANLHTSEQVAVGGAVGGTVGLVWYQLGKNGINKWMERQFVLMTGKPLLPWGWLVGICLLGSLTVGSVERKIHKLLVR 323
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BLAST of mRNA_H-canaliculatus_F_contig1321.2643.1 vs. uniprot
Match: A0A7S1NE02_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1NE02_9EUGL)

HSP 1 Score: 120 bits (302), Expect = 3.490e-27
Identity = 77/209 (36.84%), Postives = 112/209 (53.59%), Query Frame = 3 
Query:  423 ATLFSVMELALDFLGSSTQWVVASAVGVALVTRADVGTLVYVVGSLLNAVFSKVLKKTINQVRPDGARLSDPGMPSSHAMSLFYLGTYLVIGLQNHGVWTLDSSLPQWPLGVTETQSLLGVYAVTASLWRVKAGFHTLSQVFVGAAVGTVDAVLWYRFCQAHFLSQVEAFFWGPHIPVELAVGVCVVTFFTFGNAQRKMSKIFARKKND 1049
            A+++ +   A+D +GS+T++ V++ VG +LV       L  VVG  LNA   KVLK+ IN+ RP+GAR  DPGMPSSHAMSL +L  Y  I L   G+         WP  V  T  L+ VY++ + ++R++ GFHT +QV VG   GTV+A+ W  F       +V  +     +P  + +GV  +        Q +    F  KK D
Sbjct:   21 ASMWKLCRKAIDVVGSTTKYTVSALVGTSLVLIRTTDVLNMVVGGGLNAALCKVLKRVINKSRPEGARYKDPGMPSSHAMSLGFLSCYTSIILLGLGL--------AWPQVVAATV-LMQVYSLASLVYRIQKGFHTPAQVQVGYTFGTVNALSWNHFFSHALDCKVGCYLQAGKLPWSMTLGVMFLVGLVVMERQLRTGFSFRGKKTD 220
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BLAST of mRNA_H-canaliculatus_F_contig1321.2643.1 vs. uniprot
Match: L1JU71_GUITC (acidPPc domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JU71_GUITC)

HSP 1 Score: 117 bits (292), Expect = 6.120e-26
Identity = 68/199 (34.17%), Postives = 107/199 (53.77%), Query Frame = 3 
Query:  462 LGSSTQWVVASAVGVALVTRADVGTLVYVVGSLLNAVFSKVLKKTINQVRPDGARLSDPGMPSSHAMSLFYLGTYLVIGLQNHGVWTLDSSLPQWPLGV-TETQSLLGVYAVTASLWRVKAGFHTLSQVFVGAAVGTVDAVLWYRFCQAHF--LSQVEAFFWGPHIPVELAVGVCVVTFFTFGNAQRKMSKIFARKKND 1049
            +  +T+W+V+      L+ R D  T+  + G+L NA   K+LK+ + + RPDGA +SDPGMPSSHAMSLF+L  YL   +    VWT       WP+   T   S L +++  ++ WRV+AGFHT +Q+ VG+ +G  + + W+ F   +   L +++ F            G  +V     G+ +RK+SK    K  +
Sbjct:   25 IAKNTRWLVSLTAAAFLIWRRDAVTIAAIGGALGNAALGKLLKRLLAEKRPDGAPVSDPGMPSSHAMSLFFLSLYLSAAIN---VWT------DWPMAARTIVTSSLLIFSTYSAAWRVRAGFHTPAQILVGSVLGGFNGMAWFYFNHQNMAALQRLDVFLKESSALPWALCGSLIVGALLVGSVERKISKFLKSKSEN 214
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BLAST of mRNA_H-canaliculatus_F_contig1321.2643.1 vs. uniprot
Match: A0A7S1XLD3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XLD3_9STRA)

HSP 1 Score: 113 bits (282), Expect = 4.030e-24
Identity = 73/192 (38.02%), Postives = 102/192 (53.12%), Query Frame = 3 
Query:  486 VASAVGVALVTRADVGTLVYVVGSLLNAVFSKVLKKTINQVRPDGARLSDPGMPSSHAMSLFYLGTYL---VIGLQNHGVWTLDSSLPQ--WPLGVTETQSLLGVYAVTASLWRVKAGFHTLSQVFVGAAVGTVDAVLWYRFCQAHFLSQVEAFFWGPHIPVELAVGVCVVTFFTFGNAQRKMSKIFARKKN 1046
            V+  V  ALV R DV  L +VVGS+LNA+ SK+LK+ +NQ RPD A  +DPGMPSSHA SLF++G Y    V              LP    P        ++  Y    ++WRV  G+HTL QV VGA VG+  A+ WY  C+      ++AF   P +P      + V    T G    K++++ A++K+
Sbjct:   70 VSGGVAAALVLRRDVPALAFVVGSVLNALSSKLLKRLLNQKRPDTATQTDPGMPSSHAQSLFFIGGYAMRAVAATPAPEALAAALGLPAKAGPGLQLALNPVILAYISYCAVWRVAVGYHTLPQVAVGAVVGSAAALGWYAACRPLVHDFLKAFVPEP-LPFFAVAAIGVGGVLTVGKVGEKLNRLLAKRKD 260
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1321.2643.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNW3_ECTSI1.340e-5363.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A4D9CV92_9STRA3.480e-3344.32Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
K8Z811_NANGC4.920e-3148.32Dolichyldiphosphatase (Fragment) n=1 Tax=Nannochlo... [more]
A0A7S2WS98_9STRA3.490e-3049.34Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A6H5KI89_9PHAE3.490e-2943.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6U4CT78_9STRA3.880e-2838.35Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A0G4EJI9_VITBC1.380e-2738.97Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
A0A7S1NE02_9EUGL3.490e-2736.84Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
L1JU71_GUITC6.120e-2634.17acidPPc domain-containing protein n=1 Tax=Guillard... [more]
A0A7S1XLD3_9STRA4.030e-2438.02Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1321contigH-canaliculatus_F_contig1321:16137..21388 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score194.9
Seed ortholog evalue6e-47
Seed eggNOG ortholog2880.D7FNW3
KEGG rclassRC00002,RC00003,RC02120,RC03389,RC03391
KEGG koko:K07252,ko:K19737
KEGG ReactionR01004,R11216,R11218,R11220
KEGG Pathwayko00510,map00510
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006464,GO:0006486,GO:0006487,GO:0006629,GO:0006638,GO:0006639,GO:0006651,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008195,GO:0008610,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009507,GO:0009536,GO:0009987,GO:0012505,GO:0016020,GO:0016021,GO:0016311,GO:0016462,GO:0016787,GO:0016788,GO:0016791,GO:0016817,GO:0016818,GO:0019538,GO:0030176,GO:0031224,GO:0031227,GO:0031984,GO:0034645,GO:0036211,GO:0042175,GO:0042578,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045017,GO:0046339,GO:0046460,GO:0046463,GO:0046486,GO:0047874,GO:0070085,GO:0071704,GO:0098827,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.dolichyldiphosphatase activity
EggNOG OGsCOG0671@1,KOG3146@2759
EC2.1.1.320,3.6.1.43
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03036
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionPhosphatidic acid phosphatase type 2/haloperoxidase
Ec32 orthologEc-12_003140.1
Exons6
Model size2910
Cds size1002
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1321.2643.1prot_H-canaliculatus_F_contig1321.2643.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig1321 16187..19530 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929060.2337677-UTR-H-canaliculatus_F_contig1321:16136..161861622929060.2337677-UTR-H-canaliculatus_F_contig1321:16136..16186Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1321 16137..16186 +
1696845664.3826394-UTR-H-canaliculatus_F_contig1321:16136..161861696845664.3826394-UTR-H-canaliculatus_F_contig1321:16136..16186Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1321 16137..16186 +
1622929060.3669338-UTR-H-canaliculatus_F_contig1321:19530..213881622929060.3669338-UTR-H-canaliculatus_F_contig1321:19530..21388Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1321 19531..21388 +
1696845664.4747899-UTR-H-canaliculatus_F_contig1321:19530..213881696845664.4747899-UTR-H-canaliculatus_F_contig1321:19530..21388Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1321 19531..21388 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929060.254394-CDS-H-canaliculatus_F_contig1321:16186..164291622929060.254394-CDS-H-canaliculatus_F_contig1321:16186..16429Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1321 16187..16429 +
1696845664.3954382-CDS-H-canaliculatus_F_contig1321:16186..164291696845664.3954382-CDS-H-canaliculatus_F_contig1321:16186..16429Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1321 16187..16429 +
1622929060.2711425-CDS-H-canaliculatus_F_contig1321:17720..180321622929060.2711425-CDS-H-canaliculatus_F_contig1321:17720..18032Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1321 17721..18032 +
1696845664.4071364-CDS-H-canaliculatus_F_contig1321:17720..180321696845664.4071364-CDS-H-canaliculatus_F_contig1321:17720..18032Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1321 17721..18032 +
1622929060.2885225-CDS-H-canaliculatus_F_contig1321:18254..183111622929060.2885225-CDS-H-canaliculatus_F_contig1321:18254..18311Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1321 18255..18311 +
1696845664.4209113-CDS-H-canaliculatus_F_contig1321:18254..183111696845664.4209113-CDS-H-canaliculatus_F_contig1321:18254..18311Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1321 18255..18311 +
1622929060.3075051-CDS-H-canaliculatus_F_contig1321:18524..186641622929060.3075051-CDS-H-canaliculatus_F_contig1321:18524..18664Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1321 18525..18664 +
1696845664.4366684-CDS-H-canaliculatus_F_contig1321:18524..186641696845664.4366684-CDS-H-canaliculatus_F_contig1321:18524..18664Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1321 18525..18664 +
1622929060.3296468-CDS-H-canaliculatus_F_contig1321:19047..191651622929060.3296468-CDS-H-canaliculatus_F_contig1321:19047..19165Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1321 19048..19165 +
1696845664.4540691-CDS-H-canaliculatus_F_contig1321:19047..191651696845664.4540691-CDS-H-canaliculatus_F_contig1321:19047..19165Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1321 19048..19165 +
1622929060.3492024-CDS-H-canaliculatus_F_contig1321:19398..195301622929060.3492024-CDS-H-canaliculatus_F_contig1321:19398..19530Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1321 19399..19530 +
1696845664.4641478-CDS-H-canaliculatus_F_contig1321:19398..195301696845664.4641478-CDS-H-canaliculatus_F_contig1321:19398..19530Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1321 19399..19530 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig1321.2643.1

>prot_H-canaliculatus_F_contig1321.2643.1 ID=prot_H-canaliculatus_F_contig1321.2643.1|Name=mRNA_H-canaliculatus_F_contig1321.2643.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=334bp
MRHSGLLPLFALVSSREATCFVVRSPSCQRKQPCGDRVVKCNPVDITTSR
DRSNDGGCCLRRVLHPLTLHTEAVPRARGGQVLHGSSHNSGNSPEFDAAA
ATSSSSRVTAGASVPDATTMVKQDATLFSVMELALDFLGSSTQWVVASAV
GVALVTRADVGTLVYVVGSLLNAVFSKVLKKTINQVRPDGARLSDPGMPS
SHAMSLFYLGTYLVIGLQNHGVWTLDSSLPQWPLGVTETQSLLGVYAVTA
SLWRVKAGFHTLSQVFVGAAVGTVDAVLWYRFCQAHFLSQVEAFFWGPHI
PVELAVGVCVVTFFTFGNAQRKMSKIFARKKND*
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mRNA from alignment at H-canaliculatus_F_contig1321:16137..21388+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1321.2643.1 ID=mRNA_H-canaliculatus_F_contig1321.2643.1|Name=mRNA_H-canaliculatus_F_contig1321.2643.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=5252bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1321:16137..21388+ (Hapterophycus canaliculatus Oshoro5f female)
GGCGACGCTGTGTCTGTTCCAGGAACCGGTACAGGGCTGTGGTCTGCCCA
ATGCGACATTCGGGTTTGCTGCCGCTTTTCGCGCTTGTGTCTTCCCGGGA
GGCGACCTGCTTTGTAGTGCGAAGTCCATCCTGCCAGCGGAAACAGCCCT
GCGGAGATCGTGTTGTCAAGTGCAACCCGGTAGACATCACAACCAGCCGC
GATAGGAGCAACGACGGAGGGTGCTGTTTGCGCCGAGTACTTCACCCGCT
CACGTTGCACACCGAAGCAGTACCGCGAGCGAGGGGAGGTCAGGTGGGGA
GAAAGCAATTCAAAAGTTTTTCTGGGAATTGTTCACAAATGTTCTGCTCG
CTCCTCAGCGCAAAAGGTCCGCTACAACGAGCCGCGTATCTACTTTACAC
AATTGGTTTCACGGCCGAGAGTACTGTAGTACGTACCTTGTGCCACACAG
CAGTAAAAGGGCGAGGTCACAATGGGCGAGGTCGTACGCCACCGACATGC
CGCTCTTAATATGCCACGCACTGAATATACAGGCGCTTGCCAACCGTCCA
TTCGCTAGGTACGCTACGGAGAGGCTGCGATTTTGCGTTTGTTGCGCCCA
TCCACGTTTGCTGCGTACTTGTAGAGCCCTTTTCAGGAAAGATTTTTCAC
GTTTTCACGTTTTGCGCACAGAAACACAGCAGCATCGCCGAAGGTGAGAG
CTCTGAGCGCCACTGGGCCCACGGCGAGTTATGACATTCCAGGGTTCCTC
GAAGCACTTGGCGCAGGTCTACAGCAGTGGGTCGCCCATGTCAGAGGCTG
TCTGGCCTTCTGCTTTTGTACGTGTAGCGCATGCTAAACTGCGGCGAGTT
TTCGTGCGGCGAGACAGCTGCTGTATCGGCGCGAGAATACGTAGAAGCAA
GACAGCGGCGGACCAGCGCGACCTACACACCGCAGCTCAAAGCAGCTGCG
GATCTAAGGCTGACTTCCAGCTTTGTTCTTTCTTTGGCAGCTGACGCATT
GGCCGCCCACCCTGGCGCTGCTGTCGCTGTGTCGTGTTCTCTCTTTATCT
GTCTGATGTTGTCTTCGTGCCGCGCCACACCTGTCACTACTGCTGTACGC
ACGCATTCGTGGAGATGCACCTAGACGAAGTCCAGCTTGCTGGGTGTAAT
GCTCCACCTTTACTCTGCATATGCTCCCCTTTACTTCAGATGCTGCGGAC
CCGCAACCTAACCTCAAGAGAGTGCGCGGAGCCGAGTGTTTAATGAAGAA
TTTTCAAATCTACCACCCCCCCGAGGCGGTAGATTCGTGAAAGACAAGAA
GACAAAAAAGTGAAAAAAAATCCTGAACAGGGCTTACTTGTAGACTACAA
ACGAATGCTCGAGAGATGCTGAAGAATGTTAATGCGTGAGACACCAAACA
GCTGATAGTGGAATTGTAGAAAACGTGTATATATGGCAGTTTTTGTCTTC
TTCGGCAAAAATGTTTCGCACGGATCCCTTCAAGTTGGAACCTCTGCGGC
GCGTACCGTCACGGCAGAGAGATCCCCTGCACTCTGTGAATCCAAACACA
CGAACGCGAACTCGACGACTGGCTCGGCGCACAGGTTCTCCACGGCAGTA
GCCACAACAGCGGAAACAGTCCCGAATTTGACGCAGCGGCGGCGACGTCG
TCGTCGTCGAGGGTGACGGCAGGAGCATCAGTGCCAGACGCCACCACGAT
GGTAAAACAGGACGCCACCCTGTTCTCCGTCATGGAACTGGCGTTGGACT
TCTTGGGCAGCAGCACGCAGTGGGTCGTTGCAAGCGCGGTGGGCGTGGCC
TTGGTGACGAGGGCCGACGTAGGGACGCTAGTGTACGTGGTGGGGTCCCT
CTTGAACGCGGTGTTCTCCAAGGTCTTGAAGAAAACGATTAATCAGGTGA
GGTGCGCGTATTGGACTGTCTCACGGTTGGGATGCGGGTCGGTGCCAGCA
GGTTTCGCTTCGGACATCTCGTGCAATGCTCGTTTGGACCGGCAGCTTTC
CCGGGATATTGCGTTGATAGCCGGCTTGTCTGCTGTTCGATGAACAACAA
CGGTACTACGTCGTGCTCGCCATTCCGTGCAGACACCGAACAATGTTGTA
CCCCATGCTCTACTCCAGGTAAGACCGGATGGAGCCCGACTATCGGACCC
AGGGATGCCGAGCTCGCACGCCATGGTGAGTAGTGCTATTGGGACCGAGC
TCATCGCATTTCGCCGTTCTCCGGAGCCGAAAGGCCTCAAGGGTACTCAG
CAACACACGTAAAAAATATTTGCTTTTGTGCCGTTTTCTGGCCATCTATC
GATCTATCGTACATCCCACCCAACGCGGCTTCCCCTCTTATGGATCGCTC
TCGTGTTTTTCTTGTTCTGCGACGGACTCGATGTTCAGTCCCTGTTCTAC
CTTGGAACGTATCTTGTGATTGGCCTCCAGAATCATGGAGTGTGGACGCT
GGACTCATCTCTACCACAGTGGCCACTCGGCGTTACGGAGACGCAGTCGC
TGCTCGGCGTGTACGCGGTAACCGCGAGGTGGGAGCAGCGGACTCAGCAA
TACTCTAGCAGCAACGTCAGCAGCGGCAAATAGACTCCCCTTTCTATACT
CGCCGCATAATTTCTTGTCCATAGGTCTTTGCCTCCAGTTTCTCCAGGTG
TCACTTCGCTGCTCTACGTGTAGATTGTTTCTCATGCCAAATATATCGAA
ACATCGAGGCTGGTCACGCTGCCGCGTGTGGCAGGTTCGGCCGGCCGAGC
AATCTACCCTCTTCTTGTGTACATCTGCGGCAACCCAGCAAAGCAAAACT
CATACCAACCTGCCCTTGTGGCAGCGAATGGTGGAGTTCGATACATTCTA
ACAAAACTGGCTTCCCACCCGCCGTTCCTCGTGGCGGTTTCCCTTACCGC
GAGTGGTACAGCCTGTGGAGAGTCAAGGCTGGCTTCCACACCCTTTCGCA
GGTCTTCGTCGGGGCTGCTGTTGGCACAGTGGACGCCGTGTTGTGGTACC
GCTTCTGCCAGGCTCATTTCCTATCACAGGTGCGGTCGGCTACAGCTATC
GTTGGTGCCGCATGTCGTGAGGGGGACGGAAGTAAGACAGAGGTGGGATC
GACTGGCACGGGGAAAAGCCGTCAACCTCAGGCTATGGATTACGCCGCCC
TTGTGCACTTCGAAGCACTTCGAAGCATGTCAAGTGTACGCTTTGTCCAA
ACTGTACGCTGTCCCTTCTCTTGCCGCGCGTGTTGCCTCCTTGCCGTTGT
TCAATCCTCAAGGTGGAGGCATTTTTTTGGGGGCCCCATATTCCCGTGGA
GCTGGCGGTTGGAGTGTGCGTGGTAACGTTTTTCACTTTCGGAAACGCAC
AACGAAAGATGTCGAAGATTTTCGCTAGAAAAAAGAACGACTAACGCAAG
ATACTGCTTATACTTCTGTCAGACTTGCAGTATTCCGTGGTATATCGCCA
GTCAGTATGATAGTATCGGTTCCTCCACGTAAGATACAGCGTTTTGTGCA
GGCTTCATCCCTTGAGTTTGTCTTTTGAACTTGTTAAAATCGTACACCAG
CCACCCTTGTCCTCTCATCCTACAATTGTTCCCTCTTTCTTGGAGACAAA
CGGCCGGGAGCGGGAGCGGTTTTTGTTATATGCTCCTTTTACAATGACGA
GAGTGAATCACACGTCTGATACGTGCCGTGGATTCAAGGCAACAGACGAT
TCGTTGGCTCAACGCACTCCGGCGGCCGTGCAGAAAGCCAGAGAGTGCAG
GAGGGTAGAATTTTACTGCACCACCTTCGACACCCACCATTATACGTTGG
CTATAGTGCGGTGGAATGGGGTACTGTGTATCCTTGACTGTTTGCCGGTT
GTTGGTTAGACTCCGAAAAATAAATAATTGTCTGGCGCATTGTACTTGTG
CCATGCCGTGCGAAAGTAGTCGAGAAGGCCGAGGGCGCGCGTGGCAAGTA
TACACGTGCTTGGAGTGTTGCCAGGGCTCTGGATAGCAGTTTGTGGTTGA
GAGTCGTCGTCGAGAGAGGCGGCAGGCAGGGTGCGACGAAAGCGTGCCTG
AGTGCAACGCAAGTTTCACGTGTTTTTGAGAATGCTTTCACAATGGCGGT
GTTTTCGGTCTGTTTTTTTGCTGTTTCGACCTTACGCTGTATCTCGGCGT
TCCCGGGCGGTCGCACTCGAAAAGTGTGCAAAATTTGTCGTGCGTATGCA
TTGGTGACAGCCTGCCCACAGGGGATTTTTCAAGATCAAGTCAAACCTCC
CGTTTTTGATGCGCCTGGGAAGAGCAGCGACGACTAGCAGCTTCTTACGT
GCGACATATGTTTCTTTGTTTGATTGGTGCAGCTACTGGCATCGACGGTA
GATTTTCGCAGCTTTGACCTTTATTCCTCTGTTGCTCTTGATTCTCCCGC
TCCCCGATTGCCCGCGTAGAGAAGTGCCACGGATAAACGAGAGTGAGTCC
GCCGTCGAAGTGAAGCGACCTTGCGTAGTGTATGCTTCGCAATGCACGGC
CTCGTGCAGCCGTGAGCGAGTTGACACGCCGAGTGCCCTCGCAAGCTCCG
ATATCGCTGATTTTGTGCAAAAAATGATCGATTTCCTCTGGATGGCGTAC
GATACAGATGGATTTGCTGTCTATGTAGCCCCCATTGCGCTTGAATGCCC
AGTCAAAGTCAAAGAGGTAAAATGATCGAATGTACCGGTAAGTTGGCTCG
GCGTGGTGGCCTGGTCGTGTGTCCGTACCAGCGTGTCTGATTGTCCGGGC
CCACGCCATTCCCCAAAATCTCGCGCCTATGTCACGGGGTCACAGGCGCG
AATAGACCAGCGCGCGGGCACCCGAATCGCGTGACAGAAGTGAGAGTCCG
GACGAGATATTGGATTCGACGCAGGAGGAGGCACGCATGCTCGAAGGCAA
AGATATCCACCACCAAACCGAAAGAGTGCACCTTAACGACACGGAGAGAG
AGGGTGAAGGGGAGGGGGGAGTAAAACGAAAGATACAGAGGGAGCCAGAG
GCGAAGCCACAGATCGGGGCAGGGAGTGCGCAGTGATGGGGTTTCGATGT
GGGTATCGGGGGCGAGAGGTGCACGCCACAAGTGACCTCGAAGGAAGGCA
CGGCTTCACGAAAACCTTACTGCTGAGTCATTCGAATCAGGTCTGTGCGG
CTCGAAAAACAAATGTACATGTAGAGAAAGGGTGCTCGATGTGCATGTAG
CAAGGTGCCCGCAGTTTTCTGATTGGCCAATCTTTTGGAAATAAAGTTTC
CT
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1321:16137..21388+

>mRNA_H-canaliculatus_F_contig1321.2643.1 ID=mRNA_H-canaliculatus_F_contig1321.2643.1|Name=mRNA_H-canaliculatus_F_contig1321.2643.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2004bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1321:16137..21388+ (Hapterophycus canaliculatus Oshoro5f female)
ATGCGACATTCGGGTTTGCTGCCGCTTTTCGCGCTTGTGTCTTCCCGGGA
GGCGACCTGCTTTGTAGTGCGAAGTCCATCCTGCCAGCGGAAACAGCCCT
GCGGAGATCGTGTTGTCAAGTGCAACCCGGTAGACATCACAACCAGCCGC
GATAGGAGCAACGACGGAGGGTGCTGTTTGCGCCGAGTACTTCACCCGCT
CACGTTGCACACCGAAGCAGTACCGCGAGCGAGGGGAGGTCAGATGCGAC
ATTCGGGTTTGCTGCCGCTTTTCGCGCTTGTGTCTTCCCGGGAGGCGACC
TGCTTTGTAGTGCGAAGTCCATCCTGCCAGCGGAAACAGCCCTGCGGAGA
TCGTGTTGTCAAGTGCAACCCGGTAGACATCACAACCAGCCGCGATAGGA
GCAACGACGGAGGGTGCTGTTTGCGCCGAGTACTTCACCCGCTCACGTTG
CACACCGAAGCAGTACCGCGAGCGAGGGGAGGTCAGGTTCTCCACGGCAG
TAGCCACAACAGCGGAAACAGTCCCGAATTTGACGCAGCGGCGGCGACGT
CGTCGTCGTCGAGGGTGACGGCAGGAGCATCAGTGCCAGACGCCACCACG
ATGGTAAAACAGGACGCCACCCTGTTCTCCGTCATGGAACTGGCGTTGGA
CTTCTTGGGCAGCAGCACGCAGTGGGTCGTTGCAAGCGCGGTGGGCGTGG
CCTTGGTGACGAGGGCCGACGTAGGGACGCTAGTGTACGTGGTGGGGTCC
CTCTTGAACGCGGTGTTCTCCAAGGTCTTGAAGAAAACGATTAATCAGGT
TCTCCACGGCAGTAGCCACAACAGCGGAAACAGTCCCGAATTTGACGCAG
CGGCGGCGACGTCGTCGTCGTCGAGGGTGACGGCAGGAGCATCAGTGCCA
GACGCCACCACGATGGTAAAACAGGACGCCACCCTGTTCTCCGTCATGGA
ACTGGCGTTGGACTTCTTGGGCAGCAGCACGCAGTGGGTCGTTGCAAGCG
CGGTGGGCGTGGCCTTGGTGACGAGGGCCGACGTAGGGACGCTAGTGTAC
GTGGTGGGGTCCCTCTTGAACGCGGTGTTCTCCAAGGTCTTGAAGAAAAC
GATTAATCAGGTAAGACCGGATGGAGCCCGACTATCGGACCCAGGGATGC
CGAGCTCGCACGCCATGGTAAGACCGGATGGAGCCCGACTATCGGACCCA
GGGATGCCGAGCTCGCACGCCATGTCCCTGTTCTACCTTGGAACGTATCT
TGTGATTGGCCTCCAGAATCATGGAGTGTGGACGCTGGACTCATCTCTAC
CACAGTGGCCACTCGGCGTTACGGAGACGCAGTCGCTGCTCGGCGTGTAC
GCGGTAACCGCGAGTCCCTGTTCTACCTTGGAACGTATCTTGTGATTGGC
CTCCAGAATCATGGAGTGTGGACGCTGGACTCATCTCTACCACAGTGGCC
ACTCGGCGTTACGGAGACGCAGTCGCTGCTCGGCGTGTACGCGGTAACCG
CGAGCCTGTGGAGAGTCAAGGCTGGCTTCCACACCCTTTCGCAGGTCTTC
GTCGGGGCTGCTGTTGGCACAGTGGACGCCGTGTTGTGGTACCGCTTCTG
CCAGGCTCATTTCCTATCACAGCCTGTGGAGAGTCAAGGCTGGCTTCCAC
ACCCTTTCGCAGGTCTTCGTCGGGGCTGCTGTTGGCACAGTGGACGCCGT
GTTGTGGTACCGCTTCTGCCAGGCTCATTTCCTATCACAGGTGGAGGCAT
TTTTTTGGGGGCCCCATATTCCCGTGGAGCTGGCGGTTGGAGTGTGCGTG
GTAACGTTTTTCACTTTCGGAAACGCACAACGAAAGATGTCGAAGATTTT
CGCTAGAAAAAAGAACGACTAAGTGGAGGCATTTTTTTGGGGGCCCCATA
TTCCCGTGGAGCTGGCGGTTGGAGTGTGCGTGGTAACGTTTTTCACTTTC
GGAAACGCACAACGAAAGATGTCGAAGATTTTCGCTAGAAAAAAGAACGA
CTAA
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