mRNA_H-canaliculatus_F_contig1320.2636.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig1320.2636.1
Unique NamemRNA_H-canaliculatus_F_contig1320.2636.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1320.2636.1 vs. uniprot
Match: D7G4Q8_ECTSI (Geranylgeranyltransferase type 1 beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4Q8_ECTSI)

HSP 1 Score: 436 bits (1122), Expect = 2.820e-147
Identity = 206/280 (73.57%), Postives = 240/280 (85.71%), Query Frame = 3 
Query:  435 ARAAAGGEWRQRGFRSGPFGVTEKHPPQTGDDKMDEGSLPATYSALATLVALEADLAAEVDGDAIVRALGSLQQEDGSFRASVSDSTCDLRFTYCACAVSTILGNWNGVDRRKAIEYIERCYDFDGGIGLAPGREACAGPTYCAVASMQLLGVLDTLPLSRRRGLVEWCVKRQDSGFQGRPNKSEDSCCSFWVGATLALLDGLHLVDYSRARRFHISCQNHVRGGFAKTPGMPPDLLHSFYSLSWLSLVREVGSLEEMDVALGLTKRAAGKLRRKCAAAR 1274
            A+  AGG+WR+RGFR GPFGV  +   + G+D   EG+L ATYSALATLVAL+ DL   VD DAIVRALGSLQ+EDGSF+AS SDSTCD+RFTYCACAVSTILGNW+GVDRRKA EY+ERCYDFDGGIG+APGREACAGPTYCAVAS++LLGVL+ LP+ RR+G++EWCV RQ  GFQGRPNK EDSCCSFWVGATLALLDGL LVD  RAR+FH+SCQN + GGFAK PG+PPD+LHSFYS+SWLSL  E G ++EMD ALG+T+RAAG+L+R  A +R
Sbjct:   66 AQQVAGGDWRRRGFRGGPFGVVAEPSQRNGEDDAGEGNLAATYSALATLVALDVDLTTGVDSDAIVRALGSLQREDGSFKASASDSTCDVRFTYCACAVSTILGNWSGVDRRKAAEYVERCYDFDGGIGMAPGREACAGPTYCAVASLKLLGVLEKLPIPRRQGILEWCVNRQGVGFQGRPNKPEDSCCSFWVGATLALLDGLDLVDDGRARQFHVSCQNRICGGFAKAPGVPPDMLHSFYSISWLSLAGEAG-VQEMDAALGVTRRAAGRLKRDAAESR 344
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BLAST of mRNA_H-canaliculatus_F_contig1320.2636.1 vs. uniprot
Match: A0A6H5KFN4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFN4_9PHAE)

HSP 1 Score: 358 bits (919), Expect = 3.760e-115
Identity = 193/357 (54.06%), Postives = 224/357 (62.75%), Query Frame = 3 
Query:  450 GGEWRQRGFRSGPFGVTEKHPPQTGDDKMDEGSLPATYSALATLVALEADLAAEVDGDAIVRALGSLQQEDGSFRASVSDSTCDLRFTYCACAVSTILGNWNGVDRRKAIEYIERCYDFDGGIGLAPGREAC-----AGPTYCAVASMQLLGVLDTLPLSRRRGLVEWCVKRQDS-----------------------------------------------------------------------------GFQGRPNKSEDSCCSFWVGATLALLDGLHLVDYSRARRFHISCQNHVRGGFAKTPGMPPDLLHSFYSLSWLSLVREVGSLEEMDVALGLTKRAAGKLRRKCAAAR 1274
            GG+WR+RGFR GPFG+  +     G D  DEG+L ATYSALATLVAL+ DL   VD +AIVRALGSLQQEDGSF+AS SDSTCD+RFTYCACAVST+LGNW+GVDRRKA EY+ERCY           R AC     AGPTYCAVAS+ LLGVL+ LP+ RR+GL+EWCV RQ+                                                                              GFQGRPNK EDSCCSFWVGATLALLDGL LVD +RAR+FH+SC N + GGFAK PG+PPD+LHSFYS+SWLSL  E G ++EMD ALG+T+RAAG+LRR  A +R
Sbjct:  105 GGDWRRRGFRGGPFGMVAEPSQGNGKDDADEGNLAATYSALATLVALDVDLTTGVDSNAIVRALGSLQQEDGSFKASASDSTCDVRFTYCACAVSTMLGNWSGVDRRKAAEYVERCY-----------RHACPISHPAGPTYCAVASLNLLGVLEKLPIPRRQGLLEWCVNRQNPTRVMADSSGEFPATNLPSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPPPLSASIALRFFGSYGSLLKGVGFQGRPNKPEDSCCSFWVGATLALLDGLDLVDEARARQFHVSCHNPICGGFAKAPGVPPDMLHSFYSISWLSLAGEAG-VQEMDTALGVTRRAAGRLRRGAAQSR 449
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BLAST of mRNA_H-canaliculatus_F_contig1320.2636.1 vs. uniprot
Match: A0A0G4J204_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J204_PLABS)

HSP 1 Score: 217 bits (552), Expect = 1.200e-61
Identity = 118/268 (44.03%), Postives = 159/268 (59.33%), Query Frame = 3 
Query:  462 RQRGFRSGPFGVTEKHPPQTGD-DKMDEGSLPATYSALATLVALEADLAAEVDGDAIVRALGSLQQEDGSFRASVSDSTCDLRFTYCACAVSTILGNWNGVDRRKAIEYIERCYDFDGGIGLAPGREACAGPTYCAVASMQLLGVLDTLPLSRRRGLVEWCVKRQDSGFQGRPNKSEDSCCSFWVGATLALLDGLHLVDYSRARRFHISCQNHVRGGFAKTPGMPPDLLHSFYSLSWLSLVREVGS-LEEMDVALGLTKRAAGKLRRK 1259
            R  GFR G +      P  T    + DEG L  TY+AL TL ALE D A   D   IVR++G+LQ+ DGSF  +++ +  D RFT+CACAV+ + G+W G+DR  A EY+ +C  FDG  G APG+E   G TY AVAS+ L+G LD L   +RR  + WC+++Q  G+ GR NK  DSC S+W+GA L LL        S  R F++SC+  V GGF K PG  PDL+HS    + LS++    S L   DVA+G+T R +  +  +
Sbjct:  103 RVGGFRGGSYLGASYDPSGTMPVHRHDEGHLAMTYTALCTLFALEYDFAG-FDWSGIVRSMGALQRPDGSFAPTIASTDIDSRFTFCACAVAWMAGDWGGIDRDLATEYLLKCVSFDGAFGFAPGQEGHGGSTYIAVASLFLMGRLDRLSRHQRRRTIAWCIRKQGDGYHGRTNKPADSCYSYWLGAALRLLGAEQYTAKSSNRDFNLSCKT-VCGGFGKLPGCDPDLMHSMMGTAGLSIIGMDSSVLLPFDVAIGVTARTSSTIHTR 368
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BLAST of mRNA_H-canaliculatus_F_contig1320.2636.1 vs. uniprot
Match: UPI0014555ED7 (geranylgeranyl transferase type-1 subunit beta-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI0014555ED7)

HSP 1 Score: 212 bits (540), Expect = 6.780e-60
Identity = 112/242 (46.28%), Postives = 158/242 (65.29%), Query Frame = 3 
Query:  531 KMDEGSLPATYSALATLVALEADLAAEVDGDAIVRALGSLQQEDGSFRASVSDSTCDLRFTYCACAVSTILGNWNGVDRRKAIEYIERCYDFDGGIGLAPGREACAGPTYCAVASMQLLGVLDTLPLSRRRGLVE-WCVKRQDSGFQGRPNKSEDSCCSFWVGATLALLDGLHLVDYSRARRFHISCQNHVRGGFAKTPGMPPDLLHSFYSLSWLSLVREVGSLEEMDVALGLTKRAAGKLR 1253
            + D G +  TY+ L++L+ L  DL+  V+  A+V  L +LQ EDGSF A+++ S  D+RF YCAC +S+IL NWNG+D  KA EYI +   +D G+G  PG+E   G T+CAVAS+ L+G LD+    R++  ++ WC+KRQ SGFQGRPNK  D+C SFWVGATL LL+    VD+S  R F +S Q+   GGFAK     PD LH+++ +  LSL+ E   L  +  +L +++RAA  L+
Sbjct:  120 RYDWGHIAMTYTGLSSLLILGDDLS-RVNKPAVVAGLKALQLEDGSFAATLNGSENDMRFIYCACCISSILNNWNGIDTNKAAEYIHKSLSYDFGLGQGPGQEGHGGTTFCAVASLVLMGRLDSTFNKRQQERIKSWCIKRQHSGFQGRPNKPVDTCYSFWVGATLKLLNAYEFVDFSCNRGFILSTQDDTVGGFAKWTDYHPDALHAYFGVCGLSLMGEPNILP-ISPSLNISQRAADHLQ 359
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BLAST of mRNA_H-canaliculatus_F_contig1320.2636.1 vs. uniprot
Match: A0A6M2CV33_RHIMP (Geranylgeranyl transferase type-1 subunit beta n=2 Tax=Rhipicephalus microplus TaxID=6941 RepID=A0A6M2CV33_RHIMP)

HSP 1 Score: 209 bits (532), Expect = 2.930e-59
Identity = 111/250 (44.40%), Postives = 156/250 (62.40%), Query Frame = 3 
Query:  543 GSLPATYSALATLVALEADLAAEVDGDAIVRALGSLQQEDGSFRASVSDSTCDLRFTYCACAVSTILGNWNGVDRRKAIEYIERCYDFDGGIGLAPGREACAGPTYCAVASMQLLGVLDTLPLSRR-RGLVEWCVKRQDSGFQGRPNKSEDSCCSFWVGATLALLDGLHLVDYSRARRFHISCQNHVRGGFAKTPGMPPDLLHSFYSLSWLSLVREVGSLEEMDVALGLTKRAAGKLRRKCAAARSALEN 1289
            G +  TY+AL TL+ L  DL+  VD  AI++ L +LQQE GSF A +  S  D+RF YCA A+ ++L +W+G D+ KA+ +I+ CY +DGGI   PG E+  G TYCAVAS+ L+G L +    R+ RGL  WC+ RQ SGFQGRPNK  D+C SFWVGA L LL     V++ +   F  S Q+ + GGF+K P   PD +H++  ++ LSL+  V  +  ++ AL +++RA   L+R      S  EN
Sbjct:   72 GHIAMTYTALTTLIILGDDLS-RVDRQAIMQGLKALQQESGSFMALIHGSEDDMRFVYCAAAICSLLHDWSGFDKEKAVSFIQACYGYDGGISPYPGTESHGGSTYCAVASLVLMGQLQSALSERQLRGLQRWCLDRQSSGFQGRPNKPIDTCYSFWVGAALKLLGAFKFVNHEKNLEFLYSTQDPITGGFSKWPDSDPDPMHAYMGIASLSLMG-VEKVAPLEPALNISQRAEEHLKRVHLLWESLKEN 319
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BLAST of mRNA_H-canaliculatus_F_contig1320.2636.1 vs. uniprot
Match: A0A7S2XYG8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYG8_9STRA)

HSP 1 Score: 205 bits (521), Expect = 6.080e-59
Identity = 106/203 (52.22%), Postives = 132/203 (65.02%), Query Frame = 3 
Query:  627 IVRALGSLQQEDGSFRASVSD-STCDLRFTYCACAVSTILGNWNGVDRRKAIEYIERCYDFDGGIGLAPGREACAGPTYCAVASMQLLGVLDTL--PLSRRRGLVEWCVKRQDSGFQGRPNKSEDSCCSFWVGATLALLDGLHLVDYSRARRFHISCQNHVRGGFAKTPGMPPDLLHSFYSLSWLSLVREVGSLEEMDVALGL 1226
            ++ AL  LQQ DGSF +   D S CDLRF YCACA+S++L NW GVDR   + Y   C  +DG  GL PG+E+  G TYCAVAS+ L+G LD+     SR R LV+WC+ RQ  GFQGRPNK  D+C SFWVGATL LL    LV+      F  +CQ    GGF+K P  PPD+LHSFYS+ WLSL    G+ + +D +LG+
Sbjct:   19 LILALRQLQQPDGSFSSLPGDGSECDLRFAYCACAISSMLQNWGGVDRPSLLAYFRACQSYDGAFGLIPGQESHGGSTYCAVASLYLMGELDSFFDGQSRLR-LVKWCLDRQVGGFQGRPNKQADTCYSFWVGATLKLLGEFDLVEPGPVTAFVATCQGW--GGFSKIPDAPPDILHSFYSVCWLSLTGFAGT-QPLDCSLGI 217
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BLAST of mRNA_H-canaliculatus_F_contig1320.2636.1 vs. uniprot
Match: A0A8B8DPT3_CRAVI (Geranylgeranyl transferase type-1 subunit beta n=3 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8DPT3_CRAVI)

HSP 1 Score: 208 bits (530), Expect = 1.570e-58
Identity = 112/269 (41.64%), Postives = 161/269 (59.85%), Query Frame = 3 
Query:  450 GGEWRQRGFRSGPFGVTEKHPPQTGDDKMDEGSLPATYSALATLVALEADLAAEVDGDAIVRALGSLQQEDGSFRASVSDSTCDLRFTYCACAVSTILGNWNGVDRRKAIEYIERCYDFDGGIGLAPGREACAGPTYCAVASMQLLGVLDTLPLSRR-RGLVEWCVKRQDSGFQGRPNKSEDSCCSFWVGATLALLDGLHLVDYSRARRFHISCQNHVRGGFAKTPGMPPDLLHSFYSLSWLSLVREVGSLEEMDVALGLTKRAAGKLR 1253
            G    Q GFR       +         K+D G +  TY+A+A+L+ L  DL+  V+  A++ AL SLQQ+DGSF      S  D+RF YCA  +  +L +W+G+D+ KA+E+I++   ++GGIG  P  EA  G T+CA+A++ L+  L+T    +R R L  WC+ RQ +GFQGRPNK  D+C SFWVGATL L+D  HL ++   R F +  Q  + GGF+K P   PD LH++  L  LSL+ E G L  M  AL +++RA+  L+
Sbjct:   89 GSNIHQCGFRGSSTNTGKNSQKTENKLKLDSGHIAMTYTAIASLLILGDDLS-RVNKTAVLTALRSLQQDDGSFCCVPEGSENDMRFVYCAACICYMLNDWSGIDQEKAVEFIQKSQSYEGGIGQGPDLEAHGGSTFCAIAALALMNKLETCFTPKRFRQLQRWCICRQQTGFQGRPNKPTDTCYSFWVGATLKLIDIYHLTNFECNRGFLMETQGSITGGFSKWPDHTPDTLHAYLGLGGLSLLGEEGVLP-MHAALNISQRASEHLK 355
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BLAST of mRNA_H-canaliculatus_F_contig1320.2636.1 vs. uniprot
Match: UPI000C78A1DA (geranylgeranyl transferase type-1 subunit beta-like n=1 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C78A1DA)

HSP 1 Score: 207 bits (528), Expect = 1.970e-58
Identity = 109/236 (46.19%), Postives = 149/236 (63.14%), Query Frame = 3 
Query:  537 DEGSLPATYSALATLVALEADLAAEVDGDAIVRALGSLQQEDGSFRASVSDSTCDLRFTYCACAVSTILGNWNGVDRRKAIEYIERCYDFDGGIGLAPGREACAGPTYCAVASMQLLGVLDTLPLSRRRGLVEWCVKRQDSGFQGRPNKSEDSCCSFWVGATLALLDGLHLVDYSRARRFHISCQNHVRGGFAKTPGMPPDLLHSFYSLSWLSLVRE--VGSLEEMDVALGLTKRA 1238
            D   +P TY+ALA LV L  DL+  +D + I + +  LQ  DGSF+ +      D+RF YCA A+S+++    GVD  +A +YI     ++GGIG  P  EA  G TYCAVA++ LL  LD LP S+  GL  WCV RQ SGFQGRPNK+ED+C +FW+GA L +L+G + +D+S  + F ++ Q+ + GGFAK   M PDLLH++  LS LSL     + SL  +D AL +T RA
Sbjct:  100 DFAHIPMTYTALAILVILGDDLS-RIDRENIAKGISVLQLPDGSFKDAAEGGENDMRFLYCAAAISSLIDLRTGVDVDRATKYISESISYEGGIGQGPWLEAHGGSTYCAVAALSLLDSLDRLPQSKIAGLKRWCVNRQISGFQGRPNKAEDTCYTFWLGAALKILEGSNYIDWSEIKNFVLTTQDPITGGFAKGTDMSPDLLHTYLGLSGLSLAEPPLLPSLNPVDPALNITLRA 334
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BLAST of mRNA_H-canaliculatus_F_contig1320.2636.1 vs. uniprot
Match: UPI001B8891F4 (geranylgeranyl transferase type-1 subunit beta-like isoform X1 n=2 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B8891F4)

HSP 1 Score: 207 bits (527), Expect = 3.640e-58
Identity = 118/273 (43.22%), Postives = 162/273 (59.34%), Query Frame = 3 
Query:  444 AAGGEWRQRGFRSGPFGVTEKHPPQTGDDKM---DEGSLPATYSALATLVALEADLAAEVDGDAIVRALGSLQQEDGSFRASVSDSTCDLRFTYCACAVSTILGNWNGVDRRKAIEYIERCYDFDGGIGLAPGREACAGPTYCAVASMQLLGVLDTLPLSRR-RGLVEWCVKRQDSGFQGRPNKSEDSCCSFWVGATLALLDGLHLVDYSRARRFHISCQNHVRGGFAKTPGMPPDLLHSFYSLSWLSLVREVGSLEEMDVALGLTKRAAGKL 1250
            A+G   +Q GFR G   +   + P+T  +K+   D   +  TY+ALA+L+ L  D +  VD  AIV  LG+LQQ++GSF A    S CD+RF YCA  +S +L NW+G+D  K ++YI+    ++G +   PG EA  GPT+C +AS+ L+  LD     R+   L  WCV RQ SGFQGRPNK  D+C SFWVGATL LLD     D    R + +  Q+ + GGFAK P   PD LH ++ +  LSL+ E G L  +  AL +++RAA  L
Sbjct:   73 ASGSNRQQCGFR-GSSTLGHSYIPETAREKLIPYDSSHIAMTYTALASLLILGDDFS-RVDRMAIVDGLGALQQDNGSFCAMPEGSECDMRFVYCATCISYMLNNWSGMDVEKTVKYIQASLTYEGALAQGPGLEAHGGPTFCGIASLILMDRLDVAFTPRQLERLKRWCVCRQQSGFQGRPNKPVDTCYSFWVGATLQLLDMFDKTDARFNRSYILETQSDITGGFAKWPQNSPDALHGYFGVCGLSLIGEAGLLP-LHAALNISQRAADHL 342
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BLAST of mRNA_H-canaliculatus_F_contig1320.2636.1 vs. uniprot
Match: A0A6B2L8R2_9EUKA (Geranylgeranyl transferase type-1 subunit beta n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L8R2_9EUKA)

HSP 1 Score: 206 bits (525), Expect = 4.580e-58
Identity = 119/289 (41.18%), Postives = 163/289 (56.40%), Query Frame = 3 
Query:  384 KRQPVRLRMEHVLTPNGARAAAGGEWRQRGFRSGPFGVTEKHPPQTGDDKMDEGSLPATYSALATLVALEADLAAEVDGDAIVRALGSLQQEDGSFRASVSDSTCDLRFTYCACAVSTILGNWNGVDRRKAIEYIERCYDFDGGIGLAPGREACAGPTYCAVASMQLLGVLDTLPLSRRRGLVEWCVKRQDSGFQGRPNKSEDSCCSFWVGATLALLDGLHLVDYSRARRFHISCQNHVRGGFAKTPGMPPDLLHSFYSLSWLSLVREVGSLEEMDVALGLTKRAAGKL 1250
            K+Q +       + P+  ++   G WR   F   PF  + K          D+G +  TY ALA L+ L  D +  VD  AI+ AL  LQQ  GSF     +S CD+R+ YCA AVS +L +W+G D+ KA +YI     +D GI  AP  EA  G TYCA+AS+ L+G LD LP   +  L +W + RQ+ GF GRPNK +D+C SFWVGA+L +L   HLVD    R++ +SCQ    GGFAK      D LHS++SL  L+ + E G L E+   LG +K++  +L
Sbjct:   49 KQQVIDWVYSLQIIPDSEKSKRYGGWRGGTFVGAPFDCSGK---AATSYPYDQGHIAMTYVALALLLILGDDFS-RVDKKAIIEALPYLQQPSGSFSPVADESECDMRYVYCAAAVSYMLNDWSGFDKDKATQYILSSQSYDYGIAQAPNEEAHGGSTYCALASLALMGRLDELP--HKDKLTKWLIFRQEQGFNGRPNKIQDTCYSFWVGASLKILGAYHLVDEQNTRKYTLSCQK-KNGGFAKWSSQSADPLHSYFSLCGLTFINEPG-LAEVLPELGFSKKSHDRL 329
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1320.2636.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4Q8_ECTSI2.820e-14773.57Geranylgeranyltransferase type 1 beta n=1 Tax=Ecto... [more]
A0A6H5KFN4_9PHAE3.760e-11554.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A0G4J204_PLABS1.200e-6144.03Uncharacterized protein n=1 Tax=Plasmodiophora bra... [more]
UPI0014555ED76.780e-6046.28geranylgeranyl transferase type-1 subunit beta-lik... [more]
A0A6M2CV33_RHIMP2.930e-5944.40Geranylgeranyl transferase type-1 subunit beta n=2... [more]
A0A7S2XYG8_9STRA6.080e-5952.22Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A8B8DPT3_CRAVI1.570e-5841.64Geranylgeranyl transferase type-1 subunit beta n=3... [more]
UPI000C78A1DA1.970e-5846.19geranylgeranyl transferase type-1 subunit beta-lik... [more]
UPI001B8891F43.640e-5843.22geranylgeranyl transferase type-1 subunit beta-lik... [more]
A0A6B2L8R2_9EUKA4.580e-5841.18Geranylgeranyl transferase type-1 subunit beta n=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1320contigH-canaliculatus_F_contig1320:20441..23432 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score437.2
Seed ortholog evalue6.2e-120
Seed eggNOG ortholog2880.D7G4Q8
Preferred namePGGT1B
KEGG koko:K11713
GOsGO:0001101,GO:0003674,GO:0003824,GO:0004659,GO:0004661,GO:0004662,GO:0004663,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005953,GO:0005968,GO:0006464,GO:0006807,GO:0006873,GO:0006874,GO:0006875,GO:0006950,GO:0007154,GO:0007163,GO:0007165,GO:0007264,GO:0007275,GO:0007507,GO:0008104,GO:0008150,GO:0008152,GO:0008270,GO:0008284,GO:0008318,GO:0009414,GO:0009415,GO:0009555,GO:0009628,GO:0009719,GO:0009725,GO:0009733,GO:0009737,GO:0009787,GO:0009788,GO:0009790,GO:0009888,GO:0009889,GO:0009890,GO:0009892,GO:0009966,GO:0009968,GO:0009987,GO:0010033,GO:0010035,GO:0010556,GO:0010558,GO:0010605,GO:0010646,GO:0010648,GO:0016740,GO:0016765,GO:0018342,GO:0018344,GO:0019222,GO:0019538,GO:0019725,GO:0022622,GO:0023051,GO:0023052,GO:0023057,GO:0030003,GO:0030010,GO:0032501,GO:0032502,GO:0032507,GO:0032991,GO:0033036,GO:0033993,GO:0034097,GO:0034613,GO:0035050,GO:0035295,GO:0035556,GO:0036211,GO:0042127,GO:0042221,GO:0042592,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0045185,GO:0045787,GO:0046872,GO:0046914,GO:0048229,GO:0048364,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048568,GO:0048583,GO:0048585,GO:0048731,GO:0048856,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050896,GO:0051179,GO:0051235,GO:0051641,GO:0051651,GO:0051716,GO:0051726,GO:0051769,GO:0051771,GO:0055065,GO:0055074,GO:0055080,GO:0055082,GO:0060255,GO:0060429,GO:0065007,GO:0065008,GO:0070727,GO:0071704,GO:0072359,GO:0072503,GO:0072507,GO:0072657,GO:0072658,GO:0072659,GO:0072660,GO:0097305,GO:0097354,GO:0098771,GO:0099402,GO:0140096,GO:1901419,GO:1901420,GO:1901564,GO:1901700,GO:1902494,GO:1905957,GO:1905958,GO:1990234,GO:1990778
EggNOG free text desc.Prenyltransferase
EggNOG OGsCOG5029@1,KOG0367@2759
EC2.5.1.59
COG Functional cat.O
BiGG ReactioniND750.YGL155W
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01006
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionTerpenoid cyclases/protein prenyltransferase alpha-alpha toroid
Ec32 orthologEc-20_000720.1
Exons6
Model size1697
Cds size894
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1320.2636.1prot_H-canaliculatus_F_contig1320.2636.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig1320 20848..23036 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929059.2320244-UTR-H-canaliculatus_F_contig1320:20440..208471622929059.2320244-UTR-H-canaliculatus_F_contig1320:20440..20847Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1320 20441..20847 +
1696845663.9910767-UTR-H-canaliculatus_F_contig1320:20440..208471696845663.9910767-UTR-H-canaliculatus_F_contig1320:20440..20847Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1320 20441..20847 +
1622929059.5690565-UTR-H-canaliculatus_F_contig1320:23036..234321622929059.5690565-UTR-H-canaliculatus_F_contig1320:23036..23432Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1320 23037..23432 +
1696845664.0772057-UTR-H-canaliculatus_F_contig1320:23036..234321696845664.0772057-UTR-H-canaliculatus_F_contig1320:23036..23432Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1320 23037..23432 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929059.4826722-CDS-H-canaliculatus_F_contig1320:20847..211071622929059.4826722-CDS-H-canaliculatus_F_contig1320:20847..21107Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1320 20848..21107 +
1696845664.008143-CDS-H-canaliculatus_F_contig1320:20847..211071696845664.008143-CDS-H-canaliculatus_F_contig1320:20847..21107Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1320 20848..21107 +
1622929059.4945557-CDS-H-canaliculatus_F_contig1320:21311..214441622929059.4945557-CDS-H-canaliculatus_F_contig1320:21311..21444Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1320 21312..21444 +
1696845664.0208602-CDS-H-canaliculatus_F_contig1320:21311..214441696845664.0208602-CDS-H-canaliculatus_F_contig1320:21311..21444Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1320 21312..21444 +
1622929059.5112882-CDS-H-canaliculatus_F_contig1320:21653..216991622929059.5112882-CDS-H-canaliculatus_F_contig1320:21653..21699Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1320 21654..21699 +
1696845664.0345523-CDS-H-canaliculatus_F_contig1320:21653..216991696845664.0345523-CDS-H-canaliculatus_F_contig1320:21653..21699Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1320 21654..21699 +
1622929059.5246718-CDS-H-canaliculatus_F_contig1320:21899..220061622929059.5246718-CDS-H-canaliculatus_F_contig1320:21899..22006Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1320 21900..22006 +
1696845664.0504906-CDS-H-canaliculatus_F_contig1320:21899..220061696845664.0504906-CDS-H-canaliculatus_F_contig1320:21899..22006Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1320 21900..22006 +
1622929059.54068-CDS-H-canaliculatus_F_contig1320:22324..224751622929059.54068-CDS-H-canaliculatus_F_contig1320:22324..22475Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1320 22325..22475 +
1696845664.059498-CDS-H-canaliculatus_F_contig1320:22324..224751696845664.059498-CDS-H-canaliculatus_F_contig1320:22324..22475Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1320 22325..22475 +
1622929059.5551143-CDS-H-canaliculatus_F_contig1320:22839..230361622929059.5551143-CDS-H-canaliculatus_F_contig1320:22839..23036Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1320 22840..23036 +
1696845664.06828-CDS-H-canaliculatus_F_contig1320:22839..230361696845664.06828-CDS-H-canaliculatus_F_contig1320:22839..23036Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1320 22840..23036 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig1320.2636.1

>prot_H-canaliculatus_F_contig1320.2636.1 ID=prot_H-canaliculatus_F_contig1320.2636.1|Name=mRNA_H-canaliculatus_F_contig1320.2636.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=298bp
MEHVLTPNGARAAAGGEWRQRGFRSGPFGVTEKHPPQTGDDKMDEGSLPA
TYSALATLVALEADLAAEVDGDAIVRALGSLQQEDGSFRASVSDSTCDLR
FTYCACAVSTILGNWNGVDRRKAIEYIERCYDFDGGIGLAPGREACAGPT
YCAVASMQLLGVLDTLPLSRRRGLVEWCVKRQDSGFQGRPNKSEDSCCSF
WVGATLALLDGLHLVDYSRARRFHISCQNHVRGGFAKTPGMPPDLLHSFY
SLSWLSLVREVGSLEEMDVALGLTKRAAGKLRRKCAAARSALENTTR*
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mRNA from alignment at H-canaliculatus_F_contig1320:20441..23432+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1320.2636.1 ID=mRNA_H-canaliculatus_F_contig1320.2636.1|Name=mRNA_H-canaliculatus_F_contig1320.2636.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2992bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1320:20441..23432+ (Hapterophycus canaliculatus Oshoro5f female)
TGCTTTTGGGCTCGCGGATCAAGCTTTCTCCACCCAGAAAAATCTGACAG
CAGTCATGGTCGGCTTCAAAGAAGCCTACAGCTAAGGAGCATACAGCCTT
GAAGGTTTGGTGGCCATCCGATCACCAGAGAGGGAGAGCGCTGCGGTGAT
GTGTTGCGCACCCTGACTTTCCAACTTTTGTCCCTCCGCGGGTGTTGAAA
TTTCGTTGCCCAAAATCCGTTGCTATAAGATCCGGCCTAAGCCGACAGTT
TCGGCCGAGAACCATCCCATTCTTTTTCTTCGATACCTGGTATTTCCATG
GTGCAGGCAAGGTGTACGATGGCGATACGTGGAGTACTATACAAACTTCT
CGACGAGACTACACAGGTTTTCTCGGCTGACTGAAACGACAACCCGTTCG
TCTCCGAATGGAGCACGTGCTGACTCCGAATGGTGCACGTGCTGCTGCAG
GAGGAGAGTGGCGGCAGCGGGGCTTTCGCAGCGGTCCTTTCGGCGTGACG
GAAAAGCATCCACCACAAACAGGCGATGATAAGATGGACGAAGGAAGCCT
TCCCGCGACCTACTCCGCGCTGGCAACGCTGGTCGCGCTAGAAGCTGACC
TGGCTGCTGAGGTCGACGGCGATGCGATCGTACGAGCGCTGGGGTCACTC
CAGCAGGAAGACGGAAGGTGCGCGCGCGCGCGGGAGAAAAATTTGGCTGG
CGACCTTTCCACGCCAAGCGCATGCCCTTATTACGAAGCTATCGACGACA
AACGGAACATCATTGTGTCGGACAACCACGTGTCCAAGCCTCGCTCGACT
TGAATTAATTTCGTGCTTTCGCCACGTGGATCTGACATCCTTTCTCTACC
GCACTCGCCGAGTACGATCAGCTTCAGGGCGTCGGTAAGCGACTCCACGT
GCGACCTCCGTTTTACCTACTGTGCCTGTGCCGTGTCGACCATCCTCGGC
AACTGGAACGGAGTCGACCGAAGGAAGGCCATCGAATACATCGAACGGTG
CTATGTGAGCGTCCGTAGCTGCCTGTTGGTGTCGCTTCTGTTTTTGTTCT
CGTGTTTTGCGGCGGTCGGTCCAGGCTAAACTGTTTTGATTCTCGTGTTG
GAATCGGCGAGAATCGATTACGGGTATTGTGTTCCCTGGCCCTGTAGGTG
TCGCCGCTTGTCTTTTTCCTGATCCTCGTACGCTCGCCGTCGTGCTGACT
GCCTCGAAGCCAGGACTTCGATGGGGGCATCGGATTAGCACCGGGGCGTG
AGGCTTGCGGTGAGTGACGCCTGTTGAGCAGAGGTGGAAATGTTGTTCGA
TTTCTAGTGATACGCATTGCTATGACAGGGCGCGTCGTGTTCTGTAAGCG
CCAGCAGTACCATCTTGCCTTGTCGGGACGCTGCACGGCATTTGGCGATC
AACAAGCAACAACTCGTCCACGCTATGATTTGCACGCACTCTCTTGCTTG
CCACGCAAGCTGGCCCGACTTACTGCGCGGTGGCATCTATGCAGCTTCTA
GGAGTCCTCGATACGCTACCGTTGTCACGCCGAAGAGGTCTTGTGGAGTG
GTGCGTCAAACGACAGGTATTGCTCCGTTGTTTATCGAGACTCGGTACCC
ATCATCACCGATTTCCAGCCTGTCGAAGGAGAGATAGGTCATTTTCTTGG
ACATTCCGCTCTTTTGTTTTGCGCTCGGGCGGAGACTTCACTTTTGCTGC
CGCTGCTACGGCTGCTGACGTTTCAAGGGGACACGAGCAGGAAATGGGAA
AGCTTGCTGCACAGCCGTTCTGTCCAGGCCTCGCTCGGGTATGGGACCGG
AATTGAGCTCGACAGATAGGGACAAATACATCCAGACCATTTGAGTCTCC
CTGCCACAAATTTTGATGCCTACTCTCTGCGAAGGACTCTGGGTTCCAGG
GTCGCCCGAATAAGTCGGAAGACAGCTGCTGCTCCTTCTGGGTGGGAGCC
ACGCTGGCTCTCCTGGACGGATTGCACCTCGTGGACTACTCGAGAGCCCG
GCGATTCCATATATCCTGTCAAAATCACGTCCGCGGTGAGAACATGATCC
CGCGCCTGTGAAAGCTACAGTTGCCGCGTGCTCTCGACGGTATTCGTATG
CTCTTTTTCACCTGTTGAGGTTTTTTCGACTTTCGCGACGCGAGCTCTTT
GATCCACGCGTGGGACTTGATATGCCGTTTGTGGCGGACTCTCGACACTC
TCGTAATACATGTAATCAGTTTGGATGAAAGCGACTTTTCATGAAGAAAA
ATGCGGCCCCGCGAATGAATCAAGTTCTCTCGAGGGCACACCAAGCACCG
AGAATGCGGACAAAAGTTTTGAGTGTGCGTGCATACCGATGCCCCGCGTA
ATCCTTCTCCTCGATCTGACCCGCCTTGGGGATGTGCGTTTCTTGGCAGG
AGGGTTTGCGAAGACGCCCGGCATGCCGCCTGACCTGCTCCACTCCTTTT
ACTCCCTTTCCTGGCTTTCCCTCGTGAGGGAGGTTGGCTCGCTCGAAGAG
ATGGACGTTGCTTTAGGACTCACCAAACGGGCGGCTGGGAAGTTGAGAAG
AAAATGTGCCGCTGCTCGGAGTGCCTTGGAAAATACGACGCGCTGATGTG
TTGATTGCCACCCATGAATGTGGACTTTTGTGCAAGGGTGGGGCTGCGGG
GGTGATCTCTGCATTCTCGATCTGTGGGCTCTCTAGCGCATACTACAAGA
ACGTACGTGGGTCGTCCTCGTGATGACTTCGGTACGAATATCGCCACATG
GATGACAGGAACATATCCAATACAAGGAAGAGTGGAAAGACCAGGGCAAC
TCGAAGTAGATTTGTGGCATTTGGTCGGCAAGACGTGTGAACTTTATAAT
GTCGTGAACGAATTGAGAGGTAATTTTGCCACCAGGATACAACACTTCGC
AGCATGAAGCATGGCGTGCACCCTGTTACAAGGCCTTTCCCAAAACTTGG
ATCAGACCTACAAATCTGGCAGGCTGCAAAACTGCTCAGGCC
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1320:20441..23432+

>mRNA_H-canaliculatus_F_contig1320.2636.1 ID=mRNA_H-canaliculatus_F_contig1320.2636.1|Name=mRNA_H-canaliculatus_F_contig1320.2636.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1788bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1320:20441..23432+ (Hapterophycus canaliculatus Oshoro5f female)
ATGGAGCACGTGCTGACTCCGAATGGTGCACGTGCTGCTGCAGGAGGAGA
GTGGCGGCAGCGGGGCTTTCGCAGCGGTCCTTTCGGCGTGACGGAAAAGC
ATCCACCACAAACAGGCGATGATAAGATGGACGAAGGAAGCCTTCCCGCG
ACCTACTCCGCGCTGGCAACGCTGGTCGCGCTAGAAGCTGACCTGGCTGC
TGAGGTCGACGGCGATGCGATCGTACGAGCGCTGGGGTCACTCCAGCAGG
AAGACGGAAGATGGAGCACGTGCTGACTCCGAATGGTGCACGTGCTGCTG
CAGGAGGAGAGTGGCGGCAGCGGGGCTTTCGCAGCGGTCCTTTCGGCGTG
ACGGAAAAGCATCCACCACAAACAGGCGATGATAAGATGGACGAAGGAAG
CCTTCCCGCGACCTACTCCGCGCTGGCAACGCTGGTCGCGCTAGAAGCTG
ACCTGGCTGCTGAGGTCGACGGCGATGCGATCGTACGAGCGCTGGGGTCA
CTCCAGCAGGAAGACGGAAGCTTCAGGGCGTCGGTAAGCGACTCCACGTG
CGACCTCCGTTTTACCTACTGTGCCTGTGCCGTGTCGACCATCCTCGGCA
ACTGGAACGGAGTCGACCGAAGGAAGGCCATCGAATACATCGAACGGTGC
TATCTTCAGGGCGTCGGTAAGCGACTCCACGTGCGACCTCCGTTTTACCT
ACTGTGCCTGTGCCGTGTCGACCATCCTCGGCAACTGGAACGGAGTCGAC
CGAAGGAAGGCCATCGAATACATCGAACGGTGCTATGACTTCGATGGGGG
CATCGGATTAGCACCGGGGCGTGAGGCTTGCGGACTTCGATGGGGGCATC
GGATTAGCACCGGGGCGTGAGGCTTGCGCTGGCCCGACTTACTGCGCGGT
GGCATCTATGCAGCTTCTAGGAGTCCTCGATACGCTACCGTTGTCACGCC
GAAGAGGTCTTGTGGAGTGGTGCGTCAAACGACAGCTGGCCCGACTTACT
GCGCGGTGGCATCTATGCAGCTTCTAGGAGTCCTCGATACGCTACCGTTG
TCACGCCGAAGAGGTCTTGTGGAGTGGTGCGTCAAACGACAGGACTCTGG
GTTCCAGGGTCGCCCGAATAAGTCGGAAGACAGCTGCTGCTCCTTCTGGG
TGGGAGCCACGCTGGCTCTCCTGGACGGATTGCACCTCGTGGACTACTCG
AGAGCCCGGCGATTCCATATATCCTGTCAAAATCACGTCCGCGGACTCTG
GGTTCCAGGGTCGCCCGAATAAGTCGGAAGACAGCTGCTGCTCCTTCTGG
GTGGGAGCCACGCTGGCTCTCCTGGACGGATTGCACCTCGTGGACTACTC
GAGAGCCCGGCGATTCCATATATCCTGTCAAAATCACGTCCGCGGAGGGT
TTGCGAAGACGCCCGGCATGCCGCCTGACCTGCTCCACTCCTTTTACTCC
CTTTCCTGGCTTTCCCTCGTGAGGGAGGTTGGCTCGCTCGAAGAGATGGA
CGTTGCTTTAGGACTCACCAAACGGGCGGCTGGGAAGTTGAGAAGAAAAT
GTGCCGCTGCTCGGAGTGCCTTGGAAAATACGACGCGCTGAGAGGGTTTG
CGAAGACGCCCGGCATGCCGCCTGACCTGCTCCACTCCTTTTACTCCCTT
TCCTGGCTTTCCCTCGTGAGGGAGGTTGGCTCGCTCGAAGAGATGGACGT
TGCTTTAGGACTCACCAAACGGGCGGCTGGGAAGTTGAGAAGAAAATGTG
CCGCTGCTCGGAGTGCCTTGGAAAATACGACGCGCTGA
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