prot_H-canaliculatus_F_contig1320.2635.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1320.2635.1
Unique Nameprot_H-canaliculatus_F_contig1320.2635.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length255
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1320.2635.1 vs. uniprot
Match: A0A6H5KJL4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KJL4_9PHAE)

HSP 1 Score: 239 bits (611), Expect = 1.850e-74
Identity = 136/206 (66.02%), Postives = 154/206 (74.76%), Query Frame = 0 
Query:    1 MGVAREGVFSVNEDIGEIATPVLPLLATDFYLGSLMIKLPFTRPQVRLEVLKQAEALLFQYLDTCERLELFDAADLTA-----------------------------RRKGIEQKMKEIEDELTRAEGKDCEDEGSD--MKRERSFLLLASLASDALDEVSGIIKETEMLEHLVKAMEQGKAGPDGESAHARREEANSSRDKGLEI 175
            MGVAREGVFS NE++GEIATPVLPLLATDFYLGSLMIKLPFT PQ+RL+VL+QAEALLF+YLDTCERL+LFDAADL A                             R++  +QKMKEIE+EL RAEGKDCEDEG    MKRERS LLLA LAS+ALD VSG+ KETEML+HLVKA EQ  AGPDG+ A ARR+E +S R  GLE+
Sbjct:   50 MGVAREGVFSANEEVGEIATPVLPLLATDFYLGSLMIKLPFTNPQIRLKVLEQAEALLFKYLDTCERLQLFDAADLQAWQAMRKEAERSMSGDRQAITREQKIERFRRQQRTQQKMKEIEEELLRAEGKDCEDEGEGDGMKRERSLLLLAGLASEALDGVSGMSKETEMLKHLVKAREQDGAGPDGQHARARRDEDSSIRSNGLEV 255
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BLAST of mRNA_H-canaliculatus_F_contig1320.2635.1 vs. uniprot
Match: A0A835ZK81_9STRA (TAP42-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZK81_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 1.090e-13
Identity = 40/81 (49.38%), Postives = 55/81 (67.90%), Query Frame = 0 
Query:    1 MGVAREGVFSVNEDIGEIATPVLPLLATDFYLGSLMIKLPFTRPQVRLEVLKQAEALLFQYLDTCERLELFDAADLTARRK 81
            M ++REG+FS NE + +I T  LPLLAT++ LGSL +KLPFT P+ R   L++A++LL  YL  C RL +   ADL   R+
Sbjct:   64 MQISREGIFSPNETLEDIETDDLPLLATEYMLGSLQLKLPFTGPEARRRALERADSLLSHYLAACARLSILADADLKTWRR 144
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1320.2635.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KJL4_9PHAE1.850e-7466.02Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZK81_9STRA1.090e-1349.38TAP42-like protein n=1 Tax=Tribonema minus TaxID=3... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 73..100
IPR038511TAP42/TAP46-like superfamilyGENE3D1.25.40.540coord: 80..144
e-value: 6.2E-6
score: 27.7
coord: 1..79
e-value: 8.2E-15
score: 56.7
IPR007304TAP46-like proteinPFAMPF04177TAP42coord: 4..166
e-value: 7.6E-23
score: 81.1
IPR007304TAP46-like proteinPANTHERPTHR10933IMMUNOGLOBULIN-BINDING PROTEIN 1coord: 3..167

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1320contigH-canaliculatus_F_contig1320:2299..19721 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1320.2635.1mRNA_H-canaliculatus_F_contig1320.2635.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1320 35..20149 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1320.2635.1 ID=prot_H-canaliculatus_F_contig1320.2635.1|Name=mRNA_H-canaliculatus_F_contig1320.2635.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=255bp
MGVAREGVFSVNEDIGEIATPVLPLLATDFYLGSLMIKLPFTRPQVRLEV
LKQAEALLFQYLDTCERLELFDAADLTARRKGIEQKMKEIEDELTRAEGK
DCEDEGSDMKRERSFLLLASLASDALDEVSGIIKETEMLEHLVKAMEQGK
AGPDGESAHARREEANSSRDKGLEIPFHTGVSCFVISSRHLALLMKKTRW
RGSVESGATAGLLNNISGLRNAEDLTRQWHASRSALPVVPRKSPQFVLLL
GSSL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007304TAP46-like
IPR038511TAP42/TAP46-like_sf