prot_H-canaliculatus_F_contig13171.2610.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig13171.2610.1
Unique Nameprot_H-canaliculatus_F_contig13171.2610.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length58
Homology
BLAST of mRNA_H-canaliculatus_F_contig13171.2610.1 vs. uniprot
Match: D7FZQ1_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZQ1_ECTSI)

HSP 1 Score: 105 bits (262), Expect = 2.860e-25
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0
Query:    1 MPDVDHVVMFDFPLNPIDYLHRSGRTARMGAKGRVTSLLAKRDLVLAAAIEQA 53
            MPDVDHVVMFDFPLNPIDYLHRSGRTARMGAKGRVTSLLAKRDLVLAAAIEQA
Sbjct:  345 MPDVDHVVMFDFPLNPIDYLHRSGRTARMGAKGRVTSLLAKRDLVLAAAIEQA 397          
BLAST of mRNA_H-canaliculatus_F_contig13171.2610.1 vs. uniprot
Match: A0A6H5KY63_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY63_9PHAE)

HSP 1 Score: 105 bits (262), Expect = 4.220e-25
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0
Query:    1 MPDVDHVVMFDFPLNPIDYLHRSGRTARMGAKGRVTSLLAKRDLVLAAAIEQA 53
            MPDVDHVVMFDFPLNPIDYLHRSGRTARMGAKGRVTSLLAKRDLVLAAAIEQA
Sbjct:  462 MPDVDHVVMFDFPLNPIDYLHRSGRTARMGAKGRVTSLLAKRDLVLAAAIEQA 514          
BLAST of mRNA_H-canaliculatus_F_contig13171.2610.1 vs. uniprot
Match: A0A836CEI1_9STRA (DEAD box helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEI1_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 6.060e-21
Identity = 45/53 (84.91%), Postives = 50/53 (94.34%), Query Frame = 0
Query:    1 MPDVDHVVMFDFPLNPIDYLHRSGRTARMGAKGRVTSLLAKRDLVLAAAIEQA 53
            +P+V HV+MFDFPLNP+DYLHRSGRTARMGA+GRVTSLLAKRD VLAAAIE A
Sbjct:  349 LPEVGHVIMFDFPLNPVDYLHRSGRTARMGARGRVTSLLAKRDRVLAAAIEAA 401          
BLAST of mRNA_H-canaliculatus_F_contig13171.2610.1 vs. uniprot
Match: A0A7S3XYE8_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XYE8_HETAK)

HSP 1 Score: 90.5 bits (223), Expect = 4.790e-20
Identity = 44/53 (83.02%), Postives = 48/53 (90.57%), Query Frame = 0
Query:    1 MPDVDHVVMFDFPLNPIDYLHRSGRTARMGAKGRVTSLLAKRDLVLAAAIEQA 53
            +PDV+HVVMFDFPLNP+DYLHRSGRTARMGA G VTS+LAKRD VLA AIE A
Sbjct:  251 VPDVEHVVMFDFPLNPVDYLHRSGRTARMGASGMVTSVLAKRDRVLAGAIEAA 303          
BLAST of mRNA_H-canaliculatus_F_contig13171.2610.1 vs. uniprot
Match: A0A1S4CYD5_TOBAC (DEAD-box ATP-dependent RNA helicase 39-like n=5 Tax=Nicotiana TaxID=4085 RepID=A0A1S4CYD5_TOBAC)

HSP 1 Score: 89.4 bits (220), Expect = 2.100e-19
Identity = 43/55 (78.18%), Postives = 51/55 (92.73%), Query Frame = 0
Query:    3 DVDHVVMFDFPLNPIDYLHRSGRTARMGAKGRVTSLLAKRDLVLAAAIEQASTRS 57
            DVDHVVMFDFPLN IDYLHR+GRTARMGAKG+VTSL+AK+DL+LAA IE+A  ++
Sbjct:  450 DVDHVVMFDFPLNSIDYLHRTGRTARMGAKGKVTSLVAKKDLLLAARIEEAMMKN 504          
BLAST of mRNA_H-canaliculatus_F_contig13171.2610.1 vs. uniprot
Match: S8CAS6_9LAMI (Helicase C-terminal domain-containing protein (Fragment) n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8CAS6_9LAMI)

HSP 1 Score: 86.7 bits (213), Expect = 2.270e-19
Identity = 41/51 (80.39%), Postives = 48/51 (94.12%), Query Frame = 0
Query:    3 DVDHVVMFDFPLNPIDYLHRSGRTARMGAKGRVTSLLAKRDLVLAAAIEQA 53
            DVDHV+MFDFPLN IDYLHR+GRTARMGAKG+VTSL+AK+D VLA+ IE+A
Sbjct:  172 DVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTSLVAKKDWVLASCIEEA 222          
BLAST of mRNA_H-canaliculatus_F_contig13171.2610.1 vs. uniprot
Match: A0A2C9WF46_MANES (Uncharacterized protein n=2 Tax=Crotonoideae TaxID=235631 RepID=A0A2C9WF46_MANES)

HSP 1 Score: 89.0 bits (219), Expect = 2.870e-19
Identity = 42/55 (76.36%), Postives = 51/55 (92.73%), Query Frame = 0
Query:    3 DVDHVVMFDFPLNPIDYLHRSGRTARMGAKGRVTSLLAKRDLVLAAAIEQASTRS 57
            DVDHV+MFDFPLN IDYLHR+GRTARMGAKG+VTSL+AKRD++LAA IE+A  ++
Sbjct:  442 DVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTSLVAKRDVLLAARIEEAMRKN 496          
BLAST of mRNA_H-canaliculatus_F_contig13171.2610.1 vs. uniprot
Match: A0A4D9D2M2_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D2M2_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 2.870e-19
Identity = 43/53 (81.13%), Postives = 49/53 (92.45%), Query Frame = 0
Query:    1 MPDVDHVVMFDFPLNPIDYLHRSGRTARMGAKGRVTSLLAKRDLVLAAAIEQA 53
            MP V+HVVMFDFPLNPI+YLHRSGRTARMGAKG+VTSLL KRD VLA+A++ A
Sbjct:  451 MPFVEHVVMFDFPLNPIEYLHRSGRTARMGAKGKVTSLLTKRDKVLASAVQTA 503          
BLAST of mRNA_H-canaliculatus_F_contig13171.2610.1 vs. uniprot
Match: A0A8B8JUK9_ABRPR (DEAD-box ATP-dependent RNA helicase 39 isoform X1 n=3 Tax=Abrus precatorius TaxID=3816 RepID=A0A8B8JUK9_ABRPR)

HSP 1 Score: 88.6 bits (218), Expect = 3.920e-19
Identity = 43/51 (84.31%), Postives = 48/51 (94.12%), Query Frame = 0
Query:    3 DVDHVVMFDFPLNPIDYLHRSGRTARMGAKGRVTSLLAKRDLVLAAAIEQA 53
            DVDHVVMFDFPLN IDYLHR+GRTARMGAKG+VTSL+AK+DLVLA  IE+A
Sbjct:  440 DVDHVVMFDFPLNSIDYLHRTGRTARMGAKGKVTSLVAKKDLVLATKIEEA 490          
BLAST of mRNA_H-canaliculatus_F_contig13171.2610.1 vs. uniprot
Match: A0A834TFY4_9FABA (DEAD-box ATP-dependent RNA helicase 39 n=1 Tax=Senna tora TaxID=362788 RepID=A0A834TFY4_9FABA)

HSP 1 Score: 88.2 bits (217), Expect = 5.370e-19
Identity = 42/51 (82.35%), Postives = 48/51 (94.12%), Query Frame = 0
Query:    3 DVDHVVMFDFPLNPIDYLHRSGRTARMGAKGRVTSLLAKRDLVLAAAIEQA 53
            DVDHV+MFDFPLN IDYLHR+GRTARMGAKG+VTSL+AK+DL LAA IE+A
Sbjct:  451 DVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTSLVAKKDLTLAARIEEA 501          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13171.2610.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZQ1_ECTSI2.860e-25100.00DEAD box helicase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A6H5KY63_9PHAE4.220e-25100.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CEI1_9STRA6.060e-2184.91DEAD box helicase n=1 Tax=Tribonema minus TaxID=30... [more]
A0A7S3XYE8_HETAK4.790e-2083.02Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A1S4CYD5_TOBAC2.100e-1978.18DEAD-box ATP-dependent RNA helicase 39-like n=5 Ta... [more]
S8CAS6_9LAMI2.270e-1980.39Helicase C-terminal domain-containing protein (Fra... [more]
A0A2C9WF46_MANES2.870e-1976.36Uncharacterized protein n=2 Tax=Crotonoideae TaxID... [more]
A0A4D9D2M2_9STRA2.870e-1981.13Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A8B8JUK9_ABRPR3.920e-1984.31DEAD-box ATP-dependent RNA helicase 39 isoform X1 ... [more]
A0A834TFY4_9FABA5.370e-1982.35DEAD-box ATP-dependent RNA helicase 39 n=1 Tax=Sen... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 1..57
e-value: 1.3E-16
score: 62.8
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 4..51
NoneNo IPR availablePANTHERPTHR24031:SF407coord: 4..51
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 2..30
e-value: 4.8E-8
score: 33.3
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 1..57
score: 9.727
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig13171contigH-canaliculatus_F_contig13171:1640..2170 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig13171.2610.1mRNA_H-canaliculatus_F_contig13171.2610.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig13171 199..3242 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig13171.2610.1 ID=prot_H-canaliculatus_F_contig13171.2610.1|Name=mRNA_H-canaliculatus_F_contig13171.2610.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=58bp
MPDVDHVVMFDFPLNPIDYLHRSGRTARMGAKGRVTSLLAKRDLVLAAAI
EQASTRS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR001650Helicase_C