prot_H-canaliculatus_F_contig13169.2607.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig13169.2607.1
Unique Nameprot_H-canaliculatus_F_contig13169.2607.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length370
Homology
BLAST of mRNA_H-canaliculatus_F_contig13169.2607.1 vs. uniprot
Match: A0A6H5K704_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K704_9PHAE)

HSP 1 Score: 169 bits (428), Expect = 7.410e-44
Identity = 136/271 (50.18%), Postives = 162/271 (59.78%), Query Frame = 0
Query:   72 TAFDCATHPASVESTWLYVECDECSEVADVAVVCTAAVSTDDLLSSGDGGDGVFTLPVIIGIVAGALVFCLCLGFCFCQHRRRVHKGSRTF-DDSQHSRVSHKPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFIAAADEAVGSPIPLAAAGAVGRAGGRDGSGD----------------IVLLARGRGAGSFKPNHA---TPAFEGIFASRNGGXXXXXXXXXXXXXXXPGPTSATALPHPAAVEMAKYSNPEMLRKDSMA 322
            + FDCATHPASVESTWLYV+CD+C+EVA ++VVCT+     ++L+S DGGDG  T+P II I  G L+  LC+GFC    ++R HKGS TF DDSQHS    K              XXXXXXXXXXXXX          A+  A  E V SP  +AA G +G +G R   GD                  LLA+G  A SFKPNH    TPA+EGIFA R G  XXXXXXXX         T++ ALPHPAAVEM+ Y+ P +LRKDSMA
Sbjct:  126 STFDCATHPASVESTWLYVDCDDCAEVATISVVCTSP----EVLTSDDGGDGDLTIPAIIAIAVGGLIVVLCVGFCVFHCKKRAHKGSHTFADDSQHSLAQQKRAGKAGAGGAAVADXXXXXXXXXXXXXAVPLP-----AYTGAIGETVESP--MAAGGTMGDSGDRGVGGDGPRNVRGGIGVSGGSSAGLLAKGSNAKSFKPNHGGVNTPAYEGIFAPRGGAGXXXXXXXXTA-------TTSAALPHPAAVEMSNYAKP-VLRKDSMA 377          
BLAST of mRNA_H-canaliculatus_F_contig13169.2607.1 vs. uniprot
Match: D8LHN9_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHN9_ECTSI)

HSP 1 Score: 136 bits (342), Expect = 3.880e-33
Identity = 114/262 (43.51%), Postives = 135/262 (51.53%), Query Frame = 0
Query:   36 ANDAGDNL-VVSDHDRIESMGRCNHGTNGRMHWSRADTAFDCATHPASVESTWLYVECDECSEVADVAVVCTAAVSTDD-LLSSGDGGDGVFTLPVIIGIVAGALVFCLCLGFCFCQHRRRVHKGSRTF-DDSQHSRVSHKPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFIAAADEAVGSPIPLAAAGAVGRAGGR----DGSGDIV------------LLARGRGAGSFKPNHA---TPAFEGIFASRNGG 275
            AND    + +++D   +E  G   + T            FDCATHPASVESTWLYV+CD+C+                  LL+SGDGGD   TLPVII IVAG L+  LCLGFC    ++R HKGS TF DDSQHS    K             XXXXXXXXXXXX            A+  A  E V SP  +AA G +G +G R    DG G++             LLA+G  A SFKPNH    TP +EGIFA R GG
Sbjct:  105 ANDCASQMWILADTGAVEEAGFPYYST------------FDCATHPASVESTWLYVDCDDCAXXXXXXXXXXXXXXXXXXLLTSGDGGDSGLTLPVIIAIVAGGLILLLCLGFCVVHRKKRAHKGSHTFADDSQHSLAQQKRAGKAGAGGAAVAXXXXXXXXXXXXNGAVPLP-----AYTGAVGETVESP--MAAGGTMGESGDRGVGGDGRGNVRGXXXXXXXSGAGLLAKGSNAKSFKPNHGGANTPGYEGIFAPRGGG 347          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13169.2607.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K704_9PHAE7.410e-4450.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHN9_ECTSI3.880e-3343.51Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..124
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 125..149
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 150..370
NoneNo IPR availableTMHMMTMhelixcoord: 124..146

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig13169contigH-canaliculatus_F_contig13169:48..1790 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig13169.2607.1mRNA_H-canaliculatus_F_contig13169.2607.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig13169 48..1792 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig13169.2607.1 ID=prot_H-canaliculatus_F_contig13169.2607.1|Name=mRNA_H-canaliculatus_F_contig13169.2607.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=370bp
PPFPEPRPRARYAVFLPLSALDAPPCRRHFNAHRFANDAGDNLVVSDHDR
IESMGRCNHGTNGRMHWSRADTAFDCATHPASVESTWLYVECDECSEVAD
VAVVCTAAVSTDDLLSSGDGGDGVFTLPVIIGIVAGALVFCLCLGFCFCQ
HRRRVHKGSRTFDDSQHSRVSHKPGGGGDGGGGGFANVAAVSVAASSVGG
GQAAGGPPPPAFIAAADEAVGSPIPLAAAGAVGRAGGRDGSGDIVLLARG
RGAGSFKPNHATPAFEGIFASRNGGGGGGGGGGDSNQGGGPGPTSATALP
HPAAVEMAKYSNPEMLRKDSMAAAAAAASAASRSQGGAGSTTVGDADMHS
RDDGFSGVLSSGVVEAGKFG
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