mRNA_H-canaliculatus_F_contig13160.2603.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig13160.2603.1 vs. uniprot
Match: A0A6H5JVG7_9PHAE (HP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVG7_9PHAE) HSP 1 Score: 255 bits (651), Expect = 7.480e-80 Identity = 128/155 (82.58%), Postives = 135/155 (87.10%), Query Frame = 1
Query: 1 QVPEMASSLNSGDSFVLLTPADVYLWVGNGCSAQEAKAAEEISQTLLDHGGVSGRTVSTVQEGSEPEGFWTALGGMGEYPKASEGEEASQEPRLFQVFGCCRSFGKLLVTPVCNFDQSDLCADDIMLLDTVSSVFVWVGPQANEMERKEVRTRTR 465
QVPE ASSLNSGDSFVLLTP DVYLWVGNGCSA+E+ AAEEIS+ +LDHGGVSGRTVSTV+EGSEPE FW ALGGMGEYPK SE EE SQEPRLFQV + GKL VTPVCNFDQSDLCADD+MLLDTVSSVFVWVGPQANE ER EV T TR
Sbjct: 203 QVPETASSLNSGDSFVLLTPTDVYLWVGNGCSAEESHAAEEISKMVLDHGGVSGRTVSTVEEGSEPEAFWDALGGMGEYPKLSEAEEVSQEPRLFQV---SNATGKLAVTPVCNFDQSDLCADDVMLLDTVSSVFVWVGPQANETERSEVCTSTR 354
BLAST of mRNA_H-canaliculatus_F_contig13160.2603.1 vs. uniprot
Match: D7FSI9_ECTSI (Villin villin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSI9_ECTSI) HSP 1 Score: 244 bits (624), Expect = 8.330e-74 Identity = 121/149 (81.21%), Postives = 129/149 (86.58%), Query Frame = 1
Query: 1 QVPEMASSLNSGDSFVLLTPADVYLWVGNGCSAQEAKAAEEISQTLLDHGGVSGRTVSTVQEGSEPEGFWTALGGMGEYPKASEGEEASQEPRLFQVFGCCRSFGKLLVTPVCNFDQSDLCADDIMLLDTVSSVFVWVGPQANEMERKE 447
QVPE ASSLNSGD+FVLLTP DVYLWVGNGCSA+E+ AAEEIS+ +LDHG VSGRTVSTV+EGSEPE FW ALGGMGEYPK SE EE SQEPRLFQV + GKL VTPVCNFDQSDLC DD+MLLDTVSSVFVWVGPQANE ER E
Sbjct: 456 QVPETASSLNSGDTFVLLTPTDVYLWVGNGCSAEESHAAEEISKMVLDHGDVSGRTVSTVEEGSEPEAFWDALGGMGEYPKLSEAEEVSQEPRLFQV---SNATGKLAVTPVCNFDQSDLCVDDVMLLDTVSSVFVWVGPQANETERSE 601
BLAST of mRNA_H-canaliculatus_F_contig13160.2603.1 vs. uniprot
Match: A0A835YKP2_9STRA (Villin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKP2_9STRA) HSP 1 Score: 154 bits (389), Expect = 1.990e-40 Identity = 75/149 (50.34%), Postives = 101/149 (67.79%), Query Frame = 1
Query: 1 QVPEMASSLNSGDSFVLLTPADVYLWVGNGCSAQEAKAAEEISQTLLDHGGVSGRTVSTVQEGSEPEGFWTALGGMGEYPKASEGEEASQEPRLFQVFGCCRSFGKLLVTPVCNFDQSDLCADDIMLLDTVSSVFVWVGPQANEMERKE 447
QVP ASSLNSGD F+++TP VY+W+G CS+ E + A +I ++LL + G SGR +QEG E FW ALGG G Y +A+E EE +Q PR+FQ+ + G + V V NFDQSDLC DD+MLLD ++ V+VWVG +N E++E
Sbjct: 543 QVPAKASSLNSGDCFLVITPTTVYMWIGTKCSSLEMETATKIGESLLTYKGASGRDFVAIQEGEETPEFWDALGGEGPYLEAAESEEVAQAPRMFQI---SNATGAMTVEEVPNFDQSDLCNDDVMLLDCLNEVYVWVGGGSNAQEQRE 688
BLAST of mRNA_H-canaliculatus_F_contig13160.2603.1 vs. uniprot
Match: A0A835YLA3_9STRA (Villin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLA3_9STRA) HSP 1 Score: 149 bits (377), Expect = 9.900e-39 Identity = 74/147 (50.34%), Postives = 98/147 (66.67%), Query Frame = 1
Query: 1 QVPEMASSLNSGDSFVLLTPADVYLWVGNGCSAQEAKAAEEISQTLLDHGGVSGRTVSTVQEGSEPEGFWTALGGMGEYPKASEGEEASQEPRLFQVFGCCRSFGKLLVTPVCNFDQSDLCADDIMLLDTVSSVFVWVGPQANEMER 441
+V A+SLNSGDSFV+LTP+ Y+W G C++ E+ A +++Q L+ G S R TV EG EP FW ALGG GEY +A+E E + Q PRLFQ+ + G + V+ V NFDQSDLC DD+MLLDT + VFVW+G +N E+
Sbjct: 485 EVAAKAASLNSGDSFVVLTPSTAYIWNGKNCASAESGVAAKVAQALV---GASKRETVTVAEGDEPAAFWEALGGQGEYAEAAEAEPSPQPPRLFQI---SNATGTMRVSEVANFDQSDLCVDDVMLLDTFTQVFVWIGTSSNPTEQ 625
BLAST of mRNA_H-canaliculatus_F_contig13160.2603.1 vs. uniprot
Match: A0A7S4HH04_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4HH04_9EUKA) HSP 1 Score: 138 bits (348), Expect = 1.390e-35 Identity = 69/149 (46.31%), Postives = 97/149 (65.10%), Query Frame = 1
Query: 1 QVPEMASSLNSGDSFVLLTPADVYLWVGNGCSAQEAKAAEEISQTLLDHGGVSGRTVSTVQEGSEPEGFWTALGGMGEYPKASEGEEASQEPRLFQVFGCCRSFGKLLVTPVCNFDQSDLCADDIMLLDTVSSVFVWVGPQANEMERKE 447
QV E ASSLNSGD FVLLTP +Y+W G+G + E + A +++TL H R++ T+ EGSEP+ FWT LGG GEYP ++ +EP+LF C GK V P+ +F Q+DL DD+ LLDT ++VFVW+G + N +E+++
Sbjct: 210 QVEEKASSLNSGDCFVLLTPETMYVWQGSGANVSEVECATVVAKTLQFH-----RSMETIIEGSEPDAFWTPLGGKGEYPSDKVHLDSDREPQLFH---CSNETGKFKVEPIFDFAQADLEEDDVFLLDTYTAVFVWLGSECNAVEKQK 350
BLAST of mRNA_H-canaliculatus_F_contig13160.2603.1 vs. uniprot
Match: A0A7S3M900_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M900_9STRA) HSP 1 Score: 135 bits (339), Expect = 4.630e-35 Identity = 71/150 (47.33%), Postives = 94/150 (62.67%), Query Frame = 1
Query: 1 QVPEMASSLNSGDSFVLLTPADVYLWVGNGCSAQEAKAAEEISQTLL-DHGGVSGRTVSTVQEGSEPEGFWTALGGMGEYPKASEGEEASQEPRLFQVFGCCRSFGKLLVTPVCNFDQSDLCADDIMLLDTVSSVFVWVGPQANEMERKE 447
+V + A SLNS DSFVL+TP+ VY W G G +A E A I+ TL + G GR V T+QEGSEP FW ALGG +YP ++EGE ++ RLF + G V V NFDQSDL +D+ LLDT + +FVWVG Q+ + E+++
Sbjct: 196 EVTDRADSLNSDDSFVLVTPSHVYAWQGRGANADELTVATNIATTLAGSYKGTGGREVVTLQEGSEPAEFWEALGGQADYPSSAEGEVVPRDARLFAA---STATGTFRVEEVDNFDQSDLNDEDVYLLDTYTQLFVWVGSQSTQQEKEQ 342
BLAST of mRNA_H-canaliculatus_F_contig13160.2603.1 vs. uniprot
Match: A0A7S3M9U8_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M9U8_9STRA) HSP 1 Score: 135 bits (339), Expect = 3.230e-34 Identity = 71/150 (47.33%), Postives = 94/150 (62.67%), Query Frame = 1
Query: 1 QVPEMASSLNSGDSFVLLTPADVYLWVGNGCSAQEAKAAEEISQTLL-DHGGVSGRTVSTVQEGSEPEGFWTALGGMGEYPKASEGEEASQEPRLFQVFGCCRSFGKLLVTPVCNFDQSDLCADDIMLLDTVSSVFVWVGPQANEMERKE 447
+V + A SLNS DSFVL+TP+ VY W G G +A E A I+ TL + G GR V T+QEGSEP FW ALGG +YP ++EGE ++ RLF + G V V NFDQSDL +D+ LLDT + +FVWVG Q+ + E+++
Sbjct: 196 EVTDRADSLNSDDSFVLVTPSHVYAWQGRGANADELTVATNIATTLAGSYKGTGGREVVTLQEGSEPAEFWEALGGQADYPSSAEGEVVPRDARLFAA---STATGTFRVEEVDNFDQSDLNDEDVYLLDTYTQLFVWVGSQSTQQEKEQ 342
BLAST of mRNA_H-canaliculatus_F_contig13160.2603.1 vs. uniprot
Match: A0A7S2D1R4_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D1R4_9STRA) HSP 1 Score: 134 bits (336), Expect = 1.050e-33 Identity = 71/154 (46.10%), Postives = 94/154 (61.04%), Query Frame = 1
Query: 1 QVPEMASSLNSGDSFVLLTPADVYLWVGNGCSAQEAKAAEEISQTLLDHG-GVSG-----RTVSTVQEGSEPEGFWTALGGMGEYPKASEGEEASQEPRLFQVFGCCRSFGKLLVTPVCNFDQSDLCADDIMLLDTVSSVFVWVGPQANEMERK 444
QV E+ ++LNS D FVL+TP +Y W+G G + E +A IS+ L H G G R + TV EG EP+ FW ALGG GEYPK + GE +PRLFQ C +FG +V VC+FDQ DL DD+ LLD ++++ W+G AN ER+
Sbjct: 226 QVSEVPAALNSQDCFVLVTPTTMYSWMGVGSNDDEKASATAISEVLSTHTYGPPGTAPPSRELVTVAEGEEPDAFWEALGGKGEYPKQAPGEPVPSDPRLFQ---CSNAFGSFVVEEVCSFDQEDLLEDDVYLLDVGTTLYAWIGGGANADERR 376
BLAST of mRNA_H-canaliculatus_F_contig13160.2603.1 vs. uniprot
Match: W2RAA2_PHYPN (HP domain-containing protein n=14 Tax=Phytophthora TaxID=4783 RepID=W2RAA2_PHYPN) HSP 1 Score: 132 bits (331), Expect = 1.570e-32 Identity = 70/149 (46.98%), Postives = 87/149 (58.39%), Query Frame = 1
Query: 1 QVPEMASSLNSGDSFVLLTPADVYLWVGNGCSAQEAKAAEEISQTLLDHGGVSGRTVSTVQEGSEPEGFWTALGGMGEYPKASEGEEASQEPRLFQVFGCCRSFGKLLVTPVCNFDQSDLCADDIMLLDTVSSVFVWVGPQANEMERKE 447
QV E SSL SGD FVL+TP+ VY W GNG SA E + A +I+ L R V+EGSE + FW LGG GEY K EA EPRLFQ C +G + NF Q DL DD+ +LDT ++++VW+G ANE ER+E
Sbjct: 533 QVDEKTSSLTSGDCFVLVTPSKVYEWQGNGSSASEREIASKIASILK-----KSRDAEVVEEGSESDEFWEFLGGKGEYAKTKSSFEAPHEPRLFQ---CSNKYGYFDAREIVNFGQDDLNTDDVFILDTYTTLYVWIGAGANEPERRE 673
BLAST of mRNA_H-canaliculatus_F_contig13160.2603.1 vs. uniprot
Match: A0A7S3DDQ2_9EUKA (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3DDQ2_9EUKA) HSP 1 Score: 130 bits (328), Expect = 3.920e-32 Identity = 64/148 (43.24%), Postives = 91/148 (61.49%), Query Frame = 1
Query: 1 QVPEMASSLNSGDSFVLLTPADVYLWVGNGCSAQEAKAAEEISQTLLDHGGVSGRTVSTVQEGSEPEGFWTALGGMGEYPKASEGEEASQEPRLFQVFGCCRSFGKLLVTPVCNFDQSDLCADDIMLLDTVSSVFVWVGPQANEMERK 444
QV E A+SLNSGD+F+LLTP + +W+G GC+ E A +++ L R V V+EGSE + FW A+GG EY G E+++EPRLF C + G+ + NF Q DL DD+ +LDT ++VFVWVG ++N+ E+K
Sbjct: 535 QVEEKATSLNSGDAFILLTPGKINVWIGKGCNDDEKATAHSVAEVLKGE-----REVVEVEEGSEDDAFWEAIGGKAEYASEKAGVESAREPRLFH---CSNATGRFTAEEIPNFAQDDLYDDDVYILDTFTNVFVWVGQESNDDEKK 674 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13160.2603.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig13160.2603.1 >prot_H-canaliculatus_F_contig13160.2603.1 ID=prot_H-canaliculatus_F_contig13160.2603.1|Name=mRNA_H-canaliculatus_F_contig13160.2603.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=163bp MASSLNSGDSFVLLTPADVYLWVGNGCSAQEAKAAEEISQTLLDHGGVSGback to top mRNA from alignment at H-canaliculatus_F_contig13160:551..2412+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig13160.2603.1 ID=mRNA_H-canaliculatus_F_contig13160.2603.1|Name=mRNA_H-canaliculatus_F_contig13160.2603.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1862bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13160:551..2412+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig13160:551..2412+ >mRNA_H-canaliculatus_F_contig13160.2603.1 ID=mRNA_H-canaliculatus_F_contig13160.2603.1|Name=mRNA_H-canaliculatus_F_contig13160.2603.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=978bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13160:551..2412+ (Hapterophycus canaliculatus Oshoro5f female)back to top |