mRNA_H-canaliculatus_F_contig13150.2595.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig13150.2595.1
Unique NamemRNA_H-canaliculatus_F_contig13150.2595.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
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BLAST of mRNA_H-canaliculatus_F_contig13150.2595.1 vs. uniprot
Match: A0A7J6PKN7_PEROL (Meprin and TRAF y domain-containing protein MATH domain-containing protein n=5 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6PKN7_PEROL)

HSP 1 Score: 57.8 bits (138), Expect = 2.030e-8
Identity = 24/50 (48.00%), Postives = 32/50 (64.00%), Query Frame = 1 
Query:    4 RLNDLHRCDLETMTWARIPGDGDVPTPRYFHSCAVNNGSMYVFGGYDGSH 153
            R+ND    D +  +WA +   G VP+ R+ HS    NGSMYVFGGYDG++
Sbjct:  233 RVNDFWLYDTQAQSWALVAHAGQVPSARHSHSAVEYNGSMYVFGGYDGNY 282
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BLAST of mRNA_H-canaliculatus_F_contig13150.2595.1 vs. uniprot
Match: F6HHQ2_VITVI (Uncharacterized protein n=2 Tax=Vitis TaxID=3603 RepID=F6HHQ2_VITVI)

HSP 1 Score: 52.8 bits (125), Expect = 1.160e-6
Identity = 23/48 (47.92%), Postives = 30/48 (62.50%), Query Frame = 1 
Query:   10 NDLHRCDLETMTWARIPGDGDVPTPRYFHSCAVNNGSMYVFGGYDGSH 153
            ND+H  DL+ +TW+     GDVP PR     A   G++YVFGG DG+H
Sbjct:   48 NDIHVFDLQDLTWSVATVTGDVPPPRIGVGMAAVGGTIYVFGGRDGTH 95
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BLAST of mRNA_H-canaliculatus_F_contig13150.2595.1 vs. uniprot
Match: A0A438IEH0_VITVI (Nitrile-specifier protein 5 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438IEH0_VITVI)

HSP 1 Score: 52.8 bits (125), Expect = 1.190e-6
Identity = 23/48 (47.92%), Postives = 30/48 (62.50%), Query Frame = 1 
Query:   10 NDLHRCDLETMTWARIPGDGDVPTPRYFHSCAVNNGSMYVFGGYDGSH 153
            ND+H  DL+ +TW+     GDVP PR     A   G++YVFGG DG+H
Sbjct:  232 NDIHVFDLQDLTWSVATVTGDVPPPRIGVGMAAVGGTIYVFGGRDGTH 279
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BLAST of mRNA_H-canaliculatus_F_contig13150.2595.1 vs. uniprot
Match: A0A438JH97_VITVI (Nitrile-specifier protein 5 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438JH97_VITVI)

HSP 1 Score: 52.8 bits (125), Expect = 1.190e-6
Identity = 23/48 (47.92%), Postives = 30/48 (62.50%), Query Frame = 1 
Query:   10 NDLHRCDLETMTWARIPGDGDVPTPRYFHSCAVNNGSMYVFGGYDGSH 153
            ND+H  DL+ +TW+     GDVP PR     A   G++YVFGG DG+H
Sbjct:  568 NDIHVFDLQDLTWSVATVTGDVPPPRIGVGMAAVGGTIYVFGGRDGTH 615
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BLAST of mRNA_H-canaliculatus_F_contig13150.2595.1 vs. uniprot
Match: A0A7J6PHS8_PEROL (Leucine-zipper-like transcriptional regulator 1 n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6PHS8_PEROL)

HSP 1 Score: 52.4 bits (124), Expect = 1.630e-6
Identity = 22/47 (46.81%), Postives = 31/47 (65.96%), Query Frame = 1 
Query:    7 LNDLHRCDLETMTWARIPGDGDVPTPRYFHSCAVNNGSMYVFGGYDG 147
            LND+H  D++  TW++    G +PT R   S A + GS+Y+FGGYDG
Sbjct:  348 LNDMHEFDVDEGTWSQTHVQGYIPTGRSCPSWAYHEGSVYLFGGYDG 394
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BLAST of mRNA_H-canaliculatus_F_contig13150.2595.1 vs. uniprot
Match: A0A2L2Y620_PARTP (Uncharacterized protein n=2 Tax=Parasteatoda tepidariorum TaxID=114398 RepID=A0A2L2Y620_PARTP)

HSP 1 Score: 49.7 bits (117), Expect = 1.450e-5
Identity = 18/43 (41.86%), Postives = 28/43 (65.12%), Query Frame = 1 
Query:   10 NDLHRCDLETMTWARIPGDGDVPTPRYFHSCAVNNGSMYVFGG 138
            N +HR +L++  W ++P  G  P+ R FH+ +V N  MY+FGG
Sbjct:  147 NSVHRLNLKSFEWEKVPTKGQPPSCRDFHTASVINDKMYIFGG 189
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BLAST of mRNA_H-canaliculatus_F_contig13150.2595.1 vs. uniprot
Match: A0A507FA74_9FUNG (Uncharacterized protein n=1 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507FA74_9FUNG)

HSP 1 Score: 49.7 bits (117), Expect = 1.460e-5
Identity = 20/45 (44.44%), Postives = 29/45 (64.44%), Query Frame = 1 
Query:    7 LNDLHRCDLETMTWARIPGDGDVPTPRYFHSCAVNNGSMYVFGGY 141
            L+DLH  +L TMTW +    G +PT R  HS  + +G +YV+GG+
Sbjct:   95 LSDLHVLNLSTMTWTQPLMSGPIPTGRGKHSAIIEDGKLYVYGGW 139
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BLAST of mRNA_H-canaliculatus_F_contig13150.2595.1 vs. uniprot
Match: UPI000D72F33B (kelch domain-containing protein 2-like isoform X1 n=2 Tax=Pomacea canaliculata TaxID=400727 RepID=UPI000D72F33B)

HSP 1 Score: 48.1 bits (113), Expect = 5.110e-5
Identity = 22/49 (44.90%), Postives = 34/49 (69.39%), Query Frame = 1 
Query:    1 QRLNDLHRCDLETMTWA-RIPGDGDVPTPRYFHSCA-VNNGSMYVFGGY 141
            QR+NDLHR DL+T+TW+ ++   G  P  R +H+ A V N S+ ++GG+
Sbjct:  247 QRMNDLHRLDLDTLTWSGQLTTGGSQPIGRSWHTMAFVCNNSLLLYGGF 295
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BLAST of mRNA_H-canaliculatus_F_contig13150.2595.1 vs. uniprot
Match: A0A2T7NXN1_POMCA (Uncharacterized protein n=3 Tax=Pomacea canaliculata TaxID=400727 RepID=A0A2T7NXN1_POMCA)

HSP 1 Score: 48.1 bits (113), Expect = 5.170e-5
Identity = 22/49 (44.90%), Postives = 34/49 (69.39%), Query Frame = 1 
Query:    1 QRLNDLHRCDLETMTWA-RIPGDGDVPTPRYFHSCA-VNNGSMYVFGGY 141
            QR+NDLHR DL+T+TW+ ++   G  P  R +H+ A V N S+ ++GG+
Sbjct: 3168 QRMNDLHRLDLDTLTWSGQLTTGGSQPIGRSWHTMAFVCNNSLLLYGGF 3216
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BLAST of mRNA_H-canaliculatus_F_contig13150.2595.1 vs. uniprot
Match: D0NV56_PHYIT (Uncharacterized protein n=9 Tax=Phytophthora TaxID=4783 RepID=D0NV56_PHYIT)

HSP 1 Score: 47.4 bits (111), Expect = 9.560e-5
Identity = 26/60 (43.33%), Postives = 32/60 (53.33%), Query Frame = 1 
Query:    7 LNDLHRCDLETMTWARI-----------PGDGD---VPTPRYFHSCAV--NNGSMYVFGG 138
            LNDLHR DLET +WA +            G+ D   +P PRY HS  +   N  M+VFGG
Sbjct:   72 LNDLHRLDLETSSWAEVIFPKDQPRRREEGEADAVVLPAPRYGHSAILLNENERMFVFGG 131
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13150.2595.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A7J6PKN7_PEROL2.030e-848.00Meprin and TRAF y domain-containing protein MATH d... [more]
F6HHQ2_VITVI1.160e-647.92Uncharacterized protein n=2 Tax=Vitis TaxID=3603 R... [more]
A0A438IEH0_VITVI1.190e-647.92Nitrile-specifier protein 5 n=1 Tax=Vitis vinifera... [more]
A0A438JH97_VITVI1.190e-647.92Nitrile-specifier protein 5 n=1 Tax=Vitis vinifera... [more]
A0A7J6PHS8_PEROL1.630e-646.81Leucine-zipper-like transcriptional regulator 1 n=... [more]
A0A2L2Y620_PARTP1.450e-541.86Uncharacterized protein n=2 Tax=Parasteatoda tepid... [more]
A0A507FA74_9FUNG1.460e-544.44Uncharacterized protein n=1 Tax=Chytriomyces confe... [more]
UPI000D72F33B5.110e-544.90kelch domain-containing protein 2-like isoform X1 ... [more]
A0A2T7NXN1_POMCA5.170e-544.90Uncharacterized protein n=3 Tax=Pomacea canalicula... [more]
D0NV56_PHYIT9.560e-543.33Uncharacterized protein n=9 Tax=Phytophthora TaxID... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig13150contigH-canaliculatus_F_contig13150:1146..1685 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score63.5
Seed ortholog evalue3.2e-08
Seed eggNOG ortholog159749.K0RFJ6
KEGG koko:K10357,ko:K10523
KEGG Pathwayko04340,ko04341,map04340,map04341
KEGG ModuleM00384
GOsGO:0000151,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006508,GO:0006511,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0010498,GO:0019005,GO:0019222,GO:0019538,GO:0019899,GO:0019941,GO:0030162,GO:0030163,GO:0031461,GO:0031625,GO:0032991,GO:0043161,GO:0043170,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044389,GO:0044424,GO:0044464,GO:0050789,GO:0051171,GO:0051246,GO:0051603,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1990234
EggNOG free text desc.protein modification by small protein conjugation or removal
EggNOG OGsKOG1987@1,KOG1987@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03019,ko03029,ko04121,ko04131,ko04812
Hectar predicted targeting categoryno signal peptide or anchor
Exons2
Model size155
Cds size153
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929053.0472548-CDS-H-canaliculatus_F_contig13150:1146..12321622929053.0472548-CDS-H-canaliculatus_F_contig13150:1146..1232Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13150 1147..1232 -
1696845661.6155229-CDS-H-canaliculatus_F_contig13150:1146..12321696845661.6155229-CDS-H-canaliculatus_F_contig13150:1146..1232Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13150 1147..1232 -
1622929053.0667465-CDS-H-canaliculatus_F_contig13150:1618..16851622929053.0667465-CDS-H-canaliculatus_F_contig13150:1618..1685Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13150 1619..1685 -
1696845661.6315024-CDS-H-canaliculatus_F_contig13150:1618..16851696845661.6315024-CDS-H-canaliculatus_F_contig13150:1618..1685Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13150 1619..1685 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig13150.2595.1prot_H-canaliculatus_F_contig13150.2595.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig13150 1147..1685 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig13150.2595.1

>prot_H-canaliculatus_F_contig13150.2595.1 ID=prot_H-canaliculatus_F_contig13150.2595.1|Name=mRNA_H-canaliculatus_F_contig13150.2595.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=51bp
QRLNDLHRCDLETMTWARIPGDGDVPTPRYFHSCAVNNGSMYVFGGYDGS
H
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mRNA from alignment at H-canaliculatus_F_contig13150:1146..1685-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig13150.2595.1 ID=mRNA_H-canaliculatus_F_contig13150.2595.1|Name=mRNA_H-canaliculatus_F_contig13150.2595.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=540bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13150:1146..1685- (Hapterophycus canaliculatus Oshoro5f female)
CAGAGACTGAACGATCTCCATCGGTGCGACTTGGAGACGATGACCTGGGC
GCGAATTCCGGGTGACGGTGGGTTCATCGGTCTGCCGTGCAGTTGTGCAC
ACACGTGGTCCGTTTGGATCATGGGTTACAGGTTGAATCCTGCTTGATGG
CCCTTAGTTTGATCGTGAAATGCTTACCCGCTGTTGATAGTCTTGGGTGT
ATAGCTCGTGTGTGGCTCGTGCTTCATCGATCGCTTGTTCGCCTGTTTTG
CTTACCAATGTCCCTCGGCACCGTTTCGGCTGATTGTCCACGCATAGATG
CGATCCTGTGGCTTACTCTTTTTTCATCGCGCACCACTCCCACCACCTTC
CAACGTTGTCACGATCGTCATCGCTTCAGCTGCCGTTGCAATCTTCAGTT
TATTTTCTCATTCTCTGTTCGTGTTCTCCTACCTGTGTTTTGACGAAGAA
CAGGTGACGTTCCGACCCCCCGTTACTTCCACTCGTGCGCCGTCAATAAC
GGATCTATGTACGTGTTCGGGGGCTACGACGGCTCCCATC
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig13150:1146..1685-

>mRNA_H-canaliculatus_F_contig13150.2595.1 ID=mRNA_H-canaliculatus_F_contig13150.2595.1|Name=mRNA_H-canaliculatus_F_contig13150.2595.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=306bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13150:1146..1685- (Hapterophycus canaliculatus Oshoro5f female)
CAGAGACTGAACGATCTCCATCGGTGCGACTTGGAGACGATGACCTGGGC
GCGAATTCCGGGTGACGCAGAGACTGAACGATCTCCATCGGTGCGACTTG
GAGACGATGACCTGGGCGCGAATTCCGGGTGACGGTGACGTTCCGACCCC
CCGTTACTTCCACTCGTGCGCCGTCAATAACGGATCTATGTACGTGTTCG
GGGGCTACGACGGCTCCCATGTGACGTTCCGACCCCCCGTTACTTCCACT
CGTGCGCCGTCAATAACGGATCTATGTACGTGTTCGGGGGCTACGACGGC
TCCCAT
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