mRNA_H-canaliculatus_F_contig13141.2592.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig13141.2592.1
Unique NamemRNA_H-canaliculatus_F_contig13141.2592.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig13141.2592.1 vs. uniprot
Match: A0A6H5KH01_9PHAE (CHAT domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH01_9PHAE)

HSP 1 Score: 360 bits (925), Expect = 3.430e-116
Identity = 196/291 (67.35%), Postives = 218/291 (74.91%), Query Frame = 1
Query:    1 DQAAQQFATLFYDALMSETRRYTVQEAFDIALHLVNATNSNNSRPQGEHFLLLPAGGNHDVRIFDTLPEGDFVDETKMPPPRPPGAKPVPFYKGLEELQKVVGMLVDPVVVCVTVTGERGSGKRERAIQACDYVRKRHHFDAVLWADLRRA-APPFGARAT-YEEPCRLVRAGVGGASQKFLSFWAVWLIGIAAGMPLPGPETEDELIRFLFKSHSA--GHKVQKVLLVLEKVDSLFEAGGDARDRVLKLLSNLCSMGEQLKLLVTSEQSLQRDTNERFRHGSERVRSLSP 861
            DQAAQQFA  FYDAL+SE   +TVQ+AFDIAL+ VNA +   +RPQG+HFLLLP GGNHDVRIFDTLPEG FVDET+ PP RP  A+PVPFY+GLEELQKVV MLVDPV  CVTVTGE GSGK ERAIQACDYVR RHHFDA+ WAD++ A A    +    Y++PCRL                    IGIA GM  PGP +E+EL+RFLF   +   G    KVLLVL+ VDSLFEAGGDARDRVLKLLSNLCSM E LKLLVTSEQSLQRDTNERFRHGSERV  + P
Sbjct:  172 DQAAQQFAKQFYDALLSEAGSFTVQQAFDIALNTVNA-HPPYARPQGDHFLLLPHGGNHDVRIFDTLPEGSFVDETREPPARPRCARPVPFYQGLEELQKVVEMLVDPVTACVTVTGEHGSGKSERAIQACDYVRMRHHFDALWWADMKHAMATAINSSVWFYDDPCRL--------------------IGIAIGMTQPGPSSEEELVRFLFDRPTVQEGRTCHKVLLVLDDVDSLFEAGGDARDRVLKLLSNLCSMSEHLKLLVTSEQSLQRDTNERFRHGSERVAKVRP 441          
BLAST of mRNA_H-canaliculatus_F_contig13141.2592.1 vs. uniprot
Match: D7FNY6_ECTSI (SH2 domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNY6_ECTSI)

HSP 1 Score: 253 bits (647), Expect = 1.280e-73
Identity = 147/292 (50.34%), Postives = 186/292 (63.70%), Query Frame = 1
Query:    1 DQAAQQFATLFYDALMSETRRYTVQEAFDIALHLVNATNSNNSRPQGEHFLLLPAGGNHDVRIFDTLPEGDFVDETKMPPPRPPGAKPVPFYKGLEELQKVVGMLVDPVVVCVTVTGERGSGKRERAIQACDYVRKRHHFDAVLWADLRRAA---PPFGARATYEEPCRLVRAGVGGASQKFLSFWAVWLIGIAAGMPLPGPETEDELIRFLFKSHSAGHKVQKVLLVLEKVDSLFEAGGDARDRVLKLLSNLCSMGE--QLKLLVTSEQSLQRDTNERFRHGSERVRSLSP 861
            D AA++FA +FY+AL     R TV++AFD+AL+ VNAT+    + + + FLLLP  GNHDVRIFDTLPEG  VDET   PPRPP  K V  Y G   +Q VV +L+D    CVTVTG+ GSGK E AIQACDYVR RHHF++ LWAD  +AA    P+   ++ +    L  +  G +     S      IG+A G+P PGP T +EL +F+F +  +G   QKVLLVL+ VDSL E GGDA+DR++ LL +LCSMG    LKLL TSE  L    NE F  G+ERV  + P
Sbjct:  169 DGAAREFANVFYNALFENGGRSTVKQAFDMALNCVNATHLGAPKHEEDLFLLLPRDGNHDVRIFDTLPEGKLVDETHRLPPRPPCKKAVSSYMGPARVQHVVRLLLDERAACVTVTGDPGSGKTELAIQACDYVRYRHHFNSFLWADCDKAALDASPYNLVSSADRFYVLPNSPNGASGDSVSSEDLCRQIGVAIGIPQPGPSTTNELHQFIFPNTDSGQPSQKVLLVLDNVDSLLERGGDAQDRLVHLLGDLCSMGGGGHLKLLATSEYKLL-SGNEVFHGGTERVAEVEP 459          
BLAST of mRNA_H-canaliculatus_F_contig13141.2592.1 vs. uniprot
Match: D7FNX8_ECTSI (SH2 domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNX8_ECTSI)

HSP 1 Score: 246 bits (628), Expect = 3.440e-71
Identity = 149/289 (51.56%), Postives = 167/289 (57.79%), Query Frame = 1
Query:    1 DQAAQQFATLFYDALMSETRRYTVQEAFDIALHLVNATNSNNSRPQGEHFLLLPAGGNHDVRIFDTLPEGDFVDETKMPPPRPPGAKPVPFYKGLEELQKVVGMLVDPVVVCVTVTGERGSGKRERAIQACDYVRKRHHFDAVLWADLRRAAPPFGARATYEEPCRLVRAGVGGASQKFLSFWAVWLIGIAAGMPLPGPETEDELIRFLFKSHSA--GHKVQKVLLVLEKVDSLFEAGGDARDRVLKLLSNLCSMGEQLKLLVTSEQSLQRDTNERFRHGSERVRSLSP 861
            DQAAQQFA  FYDAL+SE  R+TV++AFDIAL+ VNA +  ++RPQG+HFLLLP GGNHDVRIFDTLPEG FVDET+ PP RP  A+PVPFY+GLEELQ                                                                                        IG+A GM  PGP +E+EL+RFLF   +   G   QKVLLVLE VDSLFEAGGDARDRVLKLLSNLCS GE LKLLVTSEQ LQRDTNERFRHGSERV  + P
Sbjct:  115 DQAAQQFAKQFYDALLSEAGRFTVKQAFDIALNTVNA-HPPHARPQGDHFLLLPHGGNHDVRIFDTLPEGRFVDETREPPARPRCARPVPFYQGLEELQ----------------------------------------------------------------------------------------IGLAIGMTQPGPNSEEELVRFLFDRPTVQEGRTCQKVLLVLEDVDSLFEAGGDARDRVLKLLSNLCSKGEHLKLLVTSEQRLQRDTNERFRHGSERVAKVKP 314          
BLAST of mRNA_H-canaliculatus_F_contig13141.2592.1 vs. uniprot
Match: D7FNY4_ECTSI (SH2 domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNY4_ECTSI)

HSP 1 Score: 223 bits (567), Expect = 1.020e-62
Identity = 131/251 (52.19%), Postives = 157/251 (62.55%), Query Frame = 1
Query:  166 GGNHDVRIFDTLPEGDFVDETKMPPPRPPGAKPVPFYKGLEELQKVVGMLVDPVVVCVTVTGERGSGKRERAIQACDYVRKRHHFDAVLWADLRRAA---------PPFGARAT------YEEPCRLVRAGVGGASQKFLSFWAVWLIGIAAGMPLPGPETEDELIRFLFKSHS--AGHKVQKVLLVLEKVDSLFEAGGDARDRVLKLLSNLCSMGE--QLKLLVTSEQSLQRDTNERFRHGSERVRSLSP 861
            GGNHDVRIF+TLPEG  VDET  P PRPP  K VP YKGL  LQ+VV +L+D    CVT+TGE GSGK ERAIQACDYVR+RH FD  LWAD  +AA          PF A  T      +E+PCRL                    IG+A GMP PGP +E EL +F+F + +  +G   QKVLLVL+ VDSL E  GDA+DR+++LL NLCS+G+   LKLL TSE  L    +ERFR G+E V  + P
Sbjct:  111 GGNHDVRIFETLPEGQLVDETHPPTPRPPCKKAVPSYKGLAGLQQVVRLLLDERAACVTITGEPGSGKTERAIQACDYVRERHRFDCFLWADCDKAALNSCSDKSGNPFFALPTCLKDSAWEDPCRL--------------------IGLAIGMPQPGPTSEQELHQFIFNNPNTDSGQPFQKVLLVLDNVDSLLERDGDAQDRLVQLLCNLCSIGDGGHLKLLATSEHKLL-SGHERFRGGTETVARVEP 340          
BLAST of mRNA_H-canaliculatus_F_contig13141.2592.1 vs. uniprot
Match: A0A6H5KC67_9PHAE (SH2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC67_9PHAE)

HSP 1 Score: 212 bits (539), Expect = 9.150e-59
Identity = 149/316 (47.15%), Postives = 184/316 (58.23%), Query Frame = 1
Query:    1 DQAAQQFATLFYDALMSETRRYTVQEAFDIALHLVNATNSNNSRPQGEH--FLLLPAGGNHD--------VRI--FDTLP------------EGDFVDETKMPPPRPPGAKPVPFYKGLEELQKVVGMLVDPVVVCVTVTGERGSGKRERAIQACDYVRKRHHFDAVLWADLRRAAPPFGARATYEEPCRLVRAGVGGASQKFLSFWAVW-LIGIAAGMPLPGPETEDELIRFLFKSHS--AGHKVQKVLLVLEKVDSLFEAGGDARDRVLKLLSNLCSMGE--QLKLLVTSEQSLQRDTNERFRHGSERVRSLSP 861
            D AA++FAT+FYDAL+      TV+ AFD AL  +NA   +   P+ E   FLLLP G            +R+  F   P             G  VDET+  PPRPP  K V  Y GL  +Q VV +L+DP  VCVTVTGE GSGK E AIQACDYVR+RHHFD+ LWAD  +AA          E   ++     GAS   +S   +  LIG+A GMP PGP T +EL +F+FK+ +  +G   QKVLLVL+ VDSLFE   DA+DR++ LLS+LCSMG    LKLL TSE  L R  N  FR GSE V ++ P
Sbjct:  134 DGAAREFATVFYDALIKH--EVTVKRAFDTALICINA---HRCPPKHEEDLFLLLPKGEEKSFGCCTAERLRLGRFQHAPFQEDQPFVVEHVGGKLVDETRQVPPRPPCKKAVSSYMGLVRVQFVVRLLLDPQTVCVTVTGEPGSGKTELAIQACDYVRERHHFDSFLWADCDKAALD-----ACPETFFVIPNSPNGASGDSVSLEDLCRLIGVAIGMPQPGPSTANELHQFIFKNPNTDSGQPFQKVLLVLDNVDSLFERDEDAQDRLVHLLSDLCSMGGGGHLKLLATSEYKLLRG-NGYFRGGSEMVATVKP 438          
BLAST of mRNA_H-canaliculatus_F_contig13141.2592.1 vs. uniprot
Match: A0A6H5JN51_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN51_9PHAE)

HSP 1 Score: 151 bits (381), Expect = 4.870e-42
Identity = 80/146 (54.79%), Postives = 97/146 (66.44%), Query Frame = 1
Query:  118 SNNSRPQGEHFLLLPAGGNHDVRIFDTLPEGDFVDETKMPPPRPPGAKPVPFYKGLEELQKVVGMLVDPVVVCVTVTGERGSGKRERAIQACDYVRKRHHFDAVLWADLRRAA----------PPFGAR------ATYEEPCRLVR 507
            SN+  P     + + AGGNHD+RIF+TLPEG  VDET  P PRPP  K VP +KGL  +Q+VV +L++P   CVTVTGE GSGK ERAIQACDYVR+RHHFD+ LWAD  +AA           PF A       + +E+PCRLVR
Sbjct:   14 SNHRPPALPPAVRVHAGGNHDIRIFETLPEGQLVDETHPPTPRPPCKKAVPSFKGLAGVQQVVRLLLNPQAACVTVTGEHGSGKTERAIQACDYVRERHHFDSFLWADCDKAAFNSCSDKSSGHPFFALQNCLNDSAWEDPCRLVR 159          
BLAST of mRNA_H-canaliculatus_F_contig13141.2592.1 vs. uniprot
Match: A0A7S0DT24_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DT24_9EUKA)

HSP 1 Score: 90.1 bits (222), Expect = 1.080e-16
Identity = 63/153 (41.18%), Postives = 84/153 (54.90%), Query Frame = 1
Query:    1 DQAAQQFATLFYDALMSETRRYTVQEAFDIALHLVNATNSNNSRPQGEHFLLLPAGGNHDVRIFDTLPEGDFVDETKMPPPRP-PGAKPVPFYKGLEELQKVVGMLVDPVVVCVTVTGERGSGKRERAIQACDYVRKRHHF-DAVLWADLRRA 453
            D+AA  F T FY ALM  T    V+EAF IA + V A  ++  + + E +LLLPA GNHDVRI++ +P G   D T  P     P   P    +G E    VV  +VD     +T+TGE G G+RE A+ A  Y  +R  F D V++ DL R+
Sbjct:  155 DKAALTFTTQFYLALMVNT----VKEAFQIAKNSV-ANLTDYGKGESEKYLLLPANGNHDVRIYEDIPRGTMSDHTSPPSVNNLPAVSPNLLGRG-EATHAVVSRIVDQKSRVITLTGEAGIGRREVAVAASQYAVQRQIFADGVVYIDLSRS 301          
BLAST of mRNA_H-canaliculatus_F_contig13141.2592.1 vs. uniprot
Match: D8LEZ2_ECTSI (SH2 domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEZ2_ECTSI)

HSP 1 Score: 90.1 bits (222), Expect = 1.510e-16
Identity = 57/152 (37.50%), Postives = 87/152 (57.24%), Query Frame = 1
Query:    1 DQAAQQFATLFYDALMSETRRYTVQEAFDIALHLVNATNSNNSRPQ-GEHFLLLPAGGNHDVRIFDTLPEGDFVDETKMPPPRPPGAKPVPFYKGLEELQKVVGMLVDPVVVCVTVTGERGSGKRERAIQACDYVRKRHHFDAVLWADLRRA 453
            D  A +FA  FY +L+   R  TV+ AF +     +A    + +P+ G  FLLLP  G+HD+ +F+ +P+G FVD T + PP    A    F+    ++QKVV  +V  V  CVT+TG++G GK +  ++AC Y R+R+ F  + +  L RA
Sbjct:  117 DHKAAEFAKSFYASLL---RGDTVRRAFLLG----SACLEGSDQPEEGHKFLLLPPEGDHDIPVFEEVPDGQFVDATPLKPPYRCDAVTQYFWGRAVDVQKVVKHMVSGVP-CVTITGQKGIGKTQVLLKACAYTRERNVFGEIFFCRLDRA 260          
BLAST of mRNA_H-canaliculatus_F_contig13141.2592.1 vs. uniprot
Match: A0A6H5JKD1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKD1_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 1.810e-16
Identity = 51/98 (52.04%), Postives = 65/98 (66.33%), Query Frame = 1
Query:  580 MPLPGPETEDELIRFLFKSHS--AGHKVQKVLLVLEKVDSLFEAGGDARDRVLKLLSNLCSMGE--QLKLLVTSEQSLQRDTNERFRHGSERVRSLSP 861
            M  PGP +E EL +F+FK+ +  +G   QKVLLVL+ VDSL E  GDA+DR+++ L NLCSMG+   LKLL TSE  L    NE FR G+E V  + P
Sbjct:    1 MSQPGPNSEQELHQFIFKNPNTDSGQPFQKVLLVLDSVDSLLERDGDAQDRLVQFLCNLCSMGDGGHLKLLATSEHKLL-SGNEFFRGGTEMVARVEP 97          
BLAST of mRNA_H-canaliculatus_F_contig13141.2592.1 vs. uniprot
Match: A0A6H5KXM6_9PHAE (SH2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXM6_9PHAE)

HSP 1 Score: 77.4 bits (189), Expect = 3.240e-12
Identity = 40/100 (40.00%), Postives = 61/100 (61.00%), Query Frame = 1
Query:  154 LLPAGGNHDVRIFDTLPEGDFVDETKMPPPRPPGAKPVPFYKGLEELQKVVGMLVDPVVVCVTVTGERGSGKRERAIQACDYVRKRHHFDAVLWADLRRA 453
            LLP  G+HD+ +F+ +P+G FVD T + PP    A    F+    ++QKVV  +V  V  CVT+TG++G GK +  ++AC Y R+R+ F  + +  L RA
Sbjct:  390 LLPLEGDHDIPVFEEVPDGQFVDATPLKPPYRCDAVTQYFWGRAVDVQKVVKHMVSGVP-CVTITGQKGIGKTQVLLKACAYTRERNVFGEIFFCRLDRA 488          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13141.2592.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
A0A6H5KH01_9PHAE3.430e-11667.35CHAT domain-containing protein (Fragment) n=1 Tax=... [more]
D7FNY6_ECTSI1.280e-7350.34SH2 domain containing protein n=1 Tax=Ectocarpus s... [more]
D7FNX8_ECTSI3.440e-7151.56SH2 domain containing protein n=1 Tax=Ectocarpus s... [more]
D7FNY4_ECTSI1.020e-6252.19SH2 domain containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KC67_9PHAE9.150e-5947.15SH2 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JN51_9PHAE4.870e-4254.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S0DT24_9EUKA1.080e-1641.18Hypothetical protein (Fragment) n=1 Tax=Amorphochl... [more]
D8LEZ2_ECTSI1.510e-1637.50SH2 domain containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JKD1_9PHAE1.810e-1652.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KXM6_9PHAE3.240e-1240.00SH2 domain-containing protein n=1 Tax=Ectocarpus s... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig13141contigH-canaliculatus_F_contig13141:498..3206 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score256.5
Seed ortholog evalue1.4e-65
Seed eggNOG ortholog2880.D7FNY6
EggNOG OGs28NM8@1,2QV6X@2759
Ec32 ortholog descriptionSH2 domain containing protein
Ec32 orthologEc-10_004750.1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons5
Model size861
Cds size861
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig13141.2592.1prot_H-canaliculatus_F_contig13141.2592.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig13141 498..3206 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929052.713689-CDS-H-canaliculatus_F_contig13141:497..6951622929052.713689-CDS-H-canaliculatus_F_contig13141:497..695Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13141 498..695 -
1696845661.4604385-CDS-H-canaliculatus_F_contig13141:497..6951696845661.4604385-CDS-H-canaliculatus_F_contig13141:497..695Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13141 498..695 -
1622929052.730026-CDS-H-canaliculatus_F_contig13141:961..10631622929052.730026-CDS-H-canaliculatus_F_contig13141:961..1063Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13141 962..1063 -
1696845661.4703915-CDS-H-canaliculatus_F_contig13141:961..10631696845661.4703915-CDS-H-canaliculatus_F_contig13141:961..1063Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13141 962..1063 -
1622929052.761288-CDS-H-canaliculatus_F_contig13141:1538..18021622929052.761288-CDS-H-canaliculatus_F_contig13141:1538..1802Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13141 1539..1802 -
1696845661.4825387-CDS-H-canaliculatus_F_contig13141:1538..18021696845661.4825387-CDS-H-canaliculatus_F_contig13141:1538..1802Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13141 1539..1802 -
1622929052.773896-CDS-H-canaliculatus_F_contig13141:2204..23351622929052.773896-CDS-H-canaliculatus_F_contig13141:2204..2335Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13141 2205..2335 -
1696845661.493467-CDS-H-canaliculatus_F_contig13141:2204..23351696845661.493467-CDS-H-canaliculatus_F_contig13141:2204..2335Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13141 2205..2335 -
1622929052.7865257-CDS-H-canaliculatus_F_contig13141:3040..32061622929052.7865257-CDS-H-canaliculatus_F_contig13141:3040..3206Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13141 3041..3206 -
1696845661.5042205-CDS-H-canaliculatus_F_contig13141:3040..32061696845661.5042205-CDS-H-canaliculatus_F_contig13141:3040..3206Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13141 3041..3206 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig13141.2592.1

>prot_H-canaliculatus_F_contig13141.2592.1 ID=prot_H-canaliculatus_F_contig13141.2592.1|Name=mRNA_H-canaliculatus_F_contig13141.2592.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=287bp
DQAAQQFATLFYDALMSETRRYTVQEAFDIALHLVNATNSNNSRPQGEHF
LLLPAGGNHDVRIFDTLPEGDFVDETKMPPPRPPGAKPVPFYKGLEELQK
VVGMLVDPVVVCVTVTGERGSGKRERAIQACDYVRKRHHFDAVLWADLRR
AAPPFGARATYEEPCRLVRAGVGGASQKFLSFWAVWLIGIAAGMPLPGPE
TEDELIRFLFKSHSAGHKVQKVLLVLEKVDSLFEAGGDARDRVLKLLSNL
CSMGEQLKLLVTSEQSLQRDTNERFRHGSERVRSLSP
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mRNA from alignment at H-canaliculatus_F_contig13141:498..3206-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig13141.2592.1 ID=mRNA_H-canaliculatus_F_contig13141.2592.1|Name=mRNA_H-canaliculatus_F_contig13141.2592.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2709bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13141:498..3206- (Hapterophycus canaliculatus Oshoro5f female)
GACCAAGCGGCGCAGCAATTCGCGACCCTGTTTTACGACGCGCTCATGAG CGAAACCAGGAGGTACACGGTGCAGGAGGCGTTCGACATCGCCCTCCACC TCGTGAACGCCACCAACTCAAACAACTCCCGCCCGCAGGGGGAGCACTTC CTCCTCCTCCCAGCTGGTACGTTTTTTTCGTCGTATCGAAGTTCTGGCTG AGTTGAAACGGGGGCGGGGACCAGCTGGATCCGCCGACTGGTCCAACGTT GTCTGGACCGTAGATTTGGCGGAGGCGAGGCGGGGCTGAGAGGAAGCAGC GGGGACACTAAGGCGGAGAGAGAGAGAGAGAGAGAGAGACACACACAGGC TCGGGGGCCGAAGAGGATGGCTGATGAGAGGCCACGTCGCTGGCATAGTC ATACGATCGTTTTCCTAGGAGCCAAGGAGCCTTGTCCGAACCTACGCTGC TGGCTCGCTTTGAAGCGTGCATCTTGTCTGCCTGCTTCGTGATACGGCCG GTTTTATGACTGTTTCATGATTGGATGCGGTGCGGTTTTTGGGTTCGAAG CAGTGTAGAGATGCTTACATGCGTTGCTGCTGCTGCTGCTGTTGTTGATG TTGCAGCACGACAATCTCCGAAGTGTATCAATTTATGCCCTGGCTAGGAA GGCAAGATCGTCAACAACACGAATGTGATCCCACCACCGCAACCATCAAC AGCAGCAAACAAAATCGGCGTGCACGCGCCATGGTACGTCTGGATCATCC ACCAGGCGTGCTGTGTTCATATCTCCGCATCAATCTTCCGGATCAATTGT CAAGTCTGTGAACACTCTTGACGTAACGCTCTCAACACCGCCGACACTCT CGACAAACACTCTTGACACAGGTGGAAACCACGACGTCCGGATTTTCGAT ACGCTGCCGGAAGGCGACTTTGTGGACGAGACCAAGATGCCGCCCCCACG CCCCCCCGGTGCGAAGCCCGTACCGTTTTACAAGGGTCTCGAGGAACTCC AGGTGCGAAGGGGGAGAGGGGCCACAGGGGACGCACGTAAGGCTAGACGA GGCGTGGGGAGGGGGGGGGGGGGTGGAAGAGGGAGAGAGGGCGCTACTGC TGCTGCTGCTGCTGCTGCTGCTGTTAAGATGGTCACGGTGTGAGGCGGTG CTCTTGCACAGTAGGTTTCCTAAGCCCAATCGATCCTGCGCCGCGATAGA CCTCTCTCCCATCTGGCACGGCACCCTCGCGCGACGCTGACGCTGACGCT GAGCGCATGCTCCCCCTCGTGCTCTCTCTCGTCTTGCCTCTCGTTTCTCG CGGCCGAGCAAACATGGCTTCCGTCACGAGGACACCCATCCGACCCCGTC TCGCCCGCCCCGACACGCCTGCAAAAACGAAAACCCTTGAACGCGCGCGC ACAGAAAGTTGTGGGGATGCTCGTCGACCCCGTCGTCGTTTGCGTGACCG TGACCGGCGAGCGAGGCTCCGGGAAGAGGGAACGGGCCATCCAGGCGTGC GACTACGTCCGCAAGAGGCACCACTTCGACGCGGTGCTGTGGGCAGACCT GAGGAGAGCAGCGCCTCCCTTCGGCGCGCGGGCGACGTACGAGGAGCCCT GCCGACTGGTGAGGGCGGGGGTCGGAGGGGCTTCGCAAAAGTTTCTAAGT TTTTGGGCCGTGTGGTTGGTGCTACTCGTCGCCTTCGGGGTTGCTTCATC GTCGAGGGTGTACGAACGGCCTGCTGGCGCTGCCGTGGCCGTCGGCTTGC ATTCGCGGCCAGCGCCTGTAGAAAGGACAGAGAAAAAAATAAAAATGAGC AAGTGGTTCTTCGTGGGGTTTCGAGCGGCGTTTTCTCGGTCAAGCGGGTA TCAGCGAGCTTAGCGGCCAGCCGACCATCCGGGCGCACGAAGAATGAGAG ACGAGGGAGCCGGCGGCGTGCGTGCACGCGAGCGTGAGGATCGATTCAGG CCGCGCTCCTCGCACTCTGTTTGCAACCGCCGTCGCCCCCGCCTTCTGCC CGCAAGCCCTCCTTGCTGTCCCTGCGGCGGAAAGGGGCACACCGCGCTGC TCTCTGCACCTGCGTCATTGCCAGGACGACCGATCAACCAATTCCATCCC CCCCCCCCTACCCCCCCCCTTCCCGCCCCGCTGTTTGTATCAGATCGGGA TCGCCGCAGGAATGCCCCTCCCGGGGCCTGAGACGGAGGACGAGCTGATC AGGTTCCTGTTCAAGAGCCACTCCGCCGGCCACAAAGTGCAGAAGGTGCG GCTGGGTGTGGACGCGCGGGCGGGTCCGGGAGACGTCCCATTTCCGTTTT GCGCCGCGTGGTCGTACTGCTGTTGTTGGCTTGACGCTCGAGAGAAGATT GGGGTTCAGCTCCCGTTTCTTGTGGAGCGCATACGCGCTGTGCGCTTCTG TCGCCTCTTGTCCTCGTGTATCCTCGAAGATGCTCATCAAACCCGCCCTG TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCCCTCCC GCCCTGGCCAGGTCCTCCTTGTGCTCGAAAAAGTGGACTCTCTCTTCGAG GCGGGCGGCGACGCGCGAGACCGCGTCCTCAAGCTCCTCAGCAACCTCTG CTCCATGGGGGAGCAGCTGAAGCTGCTTGTGACGAGCGAACAGAGCTTGC AGCGCGATACCAACGAGCGGTTCCGCCATGGATCGGAGAGGGTGCGTTCT TTATCGCCT
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig13141:498..3206-

>mRNA_H-canaliculatus_F_contig13141.2592.1 ID=mRNA_H-canaliculatus_F_contig13141.2592.1|Name=mRNA_H-canaliculatus_F_contig13141.2592.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1722bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13141:498..3206- (Hapterophycus canaliculatus Oshoro5f female)
GACCAAGCGGCGCAGCAATTCGCGACCCTGTTTTACGACGCGCTCATGAG
CGAAACCAGGAGGTACACGGTGCAGGAGGCGTTCGACATCGCCCTCCACC
TCGTGAACGCCACCAACTCAAACAACTCCCGCCCGCAGGGGGAGCACTTC
CTCCTCCTCCCAGCTGGACCAAGCGGCGCAGCAATTCGCGACCCTGTTTT
ACGACGCGCTCATGAGCGAAACCAGGAGGTACACGGTGCAGGAGGCGTTC
GACATCGCCCTCCACCTCGTGAACGCCACCAACTCAAACAACTCCCGCCC
GCAGGGGGAGCACTTCCTCCTCCTCCCAGCTGGTGGAAACCACGACGTCC
GGATTTTCGATACGCTGCCGGAAGGCGACTTTGTGGACGAGACCAAGATG
CCGCCCCCACGCCCCCCCGGTGCGAAGCCCGTACCGTTTTACAAGGGTCT
CGAGGAACTCCAGGTGGAAACCACGACGTCCGGATTTTCGATACGCTGCC
GGAAGGCGACTTTGTGGACGAGACCAAGATGCCGCCCCCACGCCCCCCCG
GTGCGAAGCCCGTACCGTTTTACAAGGGTCTCGAGGAACTCCAGAAAGTT
GTGGGGATGCTCGTCGACCCCGTCGTCGTTTGCGTGACCGTGACCGGCGA
GCGAGGCTCCGGGAAGAGGGAACGGGCCATCCAGGCGTGCGACTACGTCC
GCAAGAGGCACCACTTCGACGCGGTGCTGTGGGCAGACCTGAGGAGAGCA
GCGCCTCCCTTCGGCGCGCGGGCGACGTACGAGGAGCCCTGCCGACTGGT
GAGGGCGGGGGTCGGAGGGGCTTCGCAAAAGTTTCTAAGTTTTTGGGCCG
TGTGGTTGAAAGTTGTGGGGATGCTCGTCGACCCCGTCGTCGTTTGCGTG
ACCGTGACCGGCGAGCGAGGCTCCGGGAAGAGGGAACGGGCCATCCAGGC
GTGCGACTACGTCCGCAAGAGGCACCACTTCGACGCGGTGCTGTGGGCAG
ACCTGAGGAGAGCAGCGCCTCCCTTCGGCGCGCGGGCGACGTACGAGGAG
CCCTGCCGACTGGTGAGGGCGGGGGTCGGAGGGGCTTCGCAAAAGTTTCT
AAGTTTTTGGGCCGTGTGGTTGATCGGGATCGCCGCAGGAATGCCCCTCC
CGGGGCCTGAGACGGAGGACGAGCTGATCAGGTTCCTGTTCAAGAGCCAC
TCCGCCGGCCACAAAGTGCAGAAGATCGGGATCGCCGCAGGAATGCCCCT
CCCGGGGCCTGAGACGGAGGACGAGCTGATCAGGTTCCTGTTCAAGAGCC
ACTCCGCCGGCCACAAAGTGCAGAAGGTCCTCCTTGTGCTCGAAAAAGTG
GACTCTCTCTTCGAGGCGGGCGGCGACGCGCGAGACCGCGTCCTCAAGCT
CCTCAGCAACCTCTGCTCCATGGGGGAGCAGCTGAAGCTGCTTGTGACGA
GCGAACAGAGCTTGCAGCGCGATACCAACGAGCGGTTCCGCCATGGATCG
GAGAGGGTGCGTTCTTTATCGCCTGTCCTCCTTGTGCTCGAAAAAGTGGA
CTCTCTCTTCGAGGCGGGCGGCGACGCGCGAGACCGCGTCCTCAAGCTCC
TCAGCAACCTCTGCTCCATGGGGGAGCAGCTGAAGCTGCTTGTGACGAGC
GAACAGAGCTTGCAGCGCGATACCAACGAGCGGTTCCGCCATGGATCGGA
GAGGGTGCGTTCTTTATCGCCT
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