mRNA_H-canaliculatus_F_contig13141.2592.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig13141.2592.1 vs. uniprot
Match: A0A6H5KH01_9PHAE (CHAT domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH01_9PHAE) HSP 1 Score: 360 bits (925), Expect = 3.430e-116 Identity = 196/291 (67.35%), Postives = 218/291 (74.91%), Query Frame = 1
Query: 1 DQAAQQFATLFYDALMSETRRYTVQEAFDIALHLVNATNSNNSRPQGEHFLLLPAGGNHDVRIFDTLPEGDFVDETKMPPPRPPGAKPVPFYKGLEELQKVVGMLVDPVVVCVTVTGERGSGKRERAIQACDYVRKRHHFDAVLWADLRRA-APPFGARAT-YEEPCRLVRAGVGGASQKFLSFWAVWLIGIAAGMPLPGPETEDELIRFLFKSHSA--GHKVQKVLLVLEKVDSLFEAGGDARDRVLKLLSNLCSMGEQLKLLVTSEQSLQRDTNERFRHGSERVRSLSP 861
DQAAQQFA FYDAL+SE +TVQ+AFDIAL+ VNA + +RPQG+HFLLLP GGNHDVRIFDTLPEG FVDET+ PP RP A+PVPFY+GLEELQKVV MLVDPV CVTVTGE GSGK ERAIQACDYVR RHHFDA+ WAD++ A A + Y++PCRL IGIA GM PGP +E+EL+RFLF + G KVLLVL+ VDSLFEAGGDARDRVLKLLSNLCSM E LKLLVTSEQSLQRDTNERFRHGSERV + P
Sbjct: 172 DQAAQQFAKQFYDALLSEAGSFTVQQAFDIALNTVNA-HPPYARPQGDHFLLLPHGGNHDVRIFDTLPEGSFVDETREPPARPRCARPVPFYQGLEELQKVVEMLVDPVTACVTVTGEHGSGKSERAIQACDYVRMRHHFDALWWADMKHAMATAINSSVWFYDDPCRL--------------------IGIAIGMTQPGPSSEEELVRFLFDRPTVQEGRTCHKVLLVLDDVDSLFEAGGDARDRVLKLLSNLCSMSEHLKLLVTSEQSLQRDTNERFRHGSERVAKVRP 441
BLAST of mRNA_H-canaliculatus_F_contig13141.2592.1 vs. uniprot
Match: D7FNY6_ECTSI (SH2 domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNY6_ECTSI) HSP 1 Score: 253 bits (647), Expect = 1.280e-73 Identity = 147/292 (50.34%), Postives = 186/292 (63.70%), Query Frame = 1
Query: 1 DQAAQQFATLFYDALMSETRRYTVQEAFDIALHLVNATNSNNSRPQGEHFLLLPAGGNHDVRIFDTLPEGDFVDETKMPPPRPPGAKPVPFYKGLEELQKVVGMLVDPVVVCVTVTGERGSGKRERAIQACDYVRKRHHFDAVLWADLRRAA---PPFGARATYEEPCRLVRAGVGGASQKFLSFWAVWLIGIAAGMPLPGPETEDELIRFLFKSHSAGHKVQKVLLVLEKVDSLFEAGGDARDRVLKLLSNLCSMGE--QLKLLVTSEQSLQRDTNERFRHGSERVRSLSP 861
D AA++FA +FY+AL R TV++AFD+AL+ VNAT+ + + + FLLLP GNHDVRIFDTLPEG VDET PPRPP K V Y G +Q VV +L+D CVTVTG+ GSGK E AIQACDYVR RHHF++ LWAD +AA P+ ++ + L + G + S IG+A G+P PGP T +EL +F+F + +G QKVLLVL+ VDSL E GGDA+DR++ LL +LCSMG LKLL TSE L NE F G+ERV + P
Sbjct: 169 DGAAREFANVFYNALFENGGRSTVKQAFDMALNCVNATHLGAPKHEEDLFLLLPRDGNHDVRIFDTLPEGKLVDETHRLPPRPPCKKAVSSYMGPARVQHVVRLLLDERAACVTVTGDPGSGKTELAIQACDYVRYRHHFNSFLWADCDKAALDASPYNLVSSADRFYVLPNSPNGASGDSVSSEDLCRQIGVAIGIPQPGPSTTNELHQFIFPNTDSGQPSQKVLLVLDNVDSLLERGGDAQDRLVHLLGDLCSMGGGGHLKLLATSEYKLL-SGNEVFHGGTERVAEVEP 459
BLAST of mRNA_H-canaliculatus_F_contig13141.2592.1 vs. uniprot
Match: D7FNX8_ECTSI (SH2 domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNX8_ECTSI) HSP 1 Score: 246 bits (628), Expect = 3.440e-71 Identity = 149/289 (51.56%), Postives = 167/289 (57.79%), Query Frame = 1
Query: 1 DQAAQQFATLFYDALMSETRRYTVQEAFDIALHLVNATNSNNSRPQGEHFLLLPAGGNHDVRIFDTLPEGDFVDETKMPPPRPPGAKPVPFYKGLEELQKVVGMLVDPVVVCVTVTGERGSGKRERAIQACDYVRKRHHFDAVLWADLRRAAPPFGARATYEEPCRLVRAGVGGASQKFLSFWAVWLIGIAAGMPLPGPETEDELIRFLFKSHSA--GHKVQKVLLVLEKVDSLFEAGGDARDRVLKLLSNLCSMGEQLKLLVTSEQSLQRDTNERFRHGSERVRSLSP 861
DQAAQQFA FYDAL+SE R+TV++AFDIAL+ VNA + ++RPQG+HFLLLP GGNHDVRIFDTLPEG FVDET+ PP RP A+PVPFY+GLEELQ IG+A GM PGP +E+EL+RFLF + G QKVLLVLE VDSLFEAGGDARDRVLKLLSNLCS GE LKLLVTSEQ LQRDTNERFRHGSERV + P
Sbjct: 115 DQAAQQFAKQFYDALLSEAGRFTVKQAFDIALNTVNA-HPPHARPQGDHFLLLPHGGNHDVRIFDTLPEGRFVDETREPPARPRCARPVPFYQGLEELQ----------------------------------------------------------------------------------------IGLAIGMTQPGPNSEEELVRFLFDRPTVQEGRTCQKVLLVLEDVDSLFEAGGDARDRVLKLLSNLCSKGEHLKLLVTSEQRLQRDTNERFRHGSERVAKVKP 314
BLAST of mRNA_H-canaliculatus_F_contig13141.2592.1 vs. uniprot
Match: D7FNY4_ECTSI (SH2 domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNY4_ECTSI) HSP 1 Score: 223 bits (567), Expect = 1.020e-62 Identity = 131/251 (52.19%), Postives = 157/251 (62.55%), Query Frame = 1
Query: 166 GGNHDVRIFDTLPEGDFVDETKMPPPRPPGAKPVPFYKGLEELQKVVGMLVDPVVVCVTVTGERGSGKRERAIQACDYVRKRHHFDAVLWADLRRAA---------PPFGARAT------YEEPCRLVRAGVGGASQKFLSFWAVWLIGIAAGMPLPGPETEDELIRFLFKSHS--AGHKVQKVLLVLEKVDSLFEAGGDARDRVLKLLSNLCSMGE--QLKLLVTSEQSLQRDTNERFRHGSERVRSLSP 861
GGNHDVRIF+TLPEG VDET P PRPP K VP YKGL LQ+VV +L+D CVT+TGE GSGK ERAIQACDYVR+RH FD LWAD +AA PF A T +E+PCRL IG+A GMP PGP +E EL +F+F + + +G QKVLLVL+ VDSL E GDA+DR+++LL NLCS+G+ LKLL TSE L +ERFR G+E V + P
Sbjct: 111 GGNHDVRIFETLPEGQLVDETHPPTPRPPCKKAVPSYKGLAGLQQVVRLLLDERAACVTITGEPGSGKTERAIQACDYVRERHRFDCFLWADCDKAALNSCSDKSGNPFFALPTCLKDSAWEDPCRL--------------------IGLAIGMPQPGPTSEQELHQFIFNNPNTDSGQPFQKVLLVLDNVDSLLERDGDAQDRLVQLLCNLCSIGDGGHLKLLATSEHKLL-SGHERFRGGTETVARVEP 340
BLAST of mRNA_H-canaliculatus_F_contig13141.2592.1 vs. uniprot
Match: A0A6H5KC67_9PHAE (SH2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC67_9PHAE) HSP 1 Score: 212 bits (539), Expect = 9.150e-59 Identity = 149/316 (47.15%), Postives = 184/316 (58.23%), Query Frame = 1
Query: 1 DQAAQQFATLFYDALMSETRRYTVQEAFDIALHLVNATNSNNSRPQGEH--FLLLPAGGNHD--------VRI--FDTLP------------EGDFVDETKMPPPRPPGAKPVPFYKGLEELQKVVGMLVDPVVVCVTVTGERGSGKRERAIQACDYVRKRHHFDAVLWADLRRAAPPFGARATYEEPCRLVRAGVGGASQKFLSFWAVW-LIGIAAGMPLPGPETEDELIRFLFKSHS--AGHKVQKVLLVLEKVDSLFEAGGDARDRVLKLLSNLCSMGE--QLKLLVTSEQSLQRDTNERFRHGSERVRSLSP 861
D AA++FAT+FYDAL+ TV+ AFD AL +NA + P+ E FLLLP G +R+ F P G VDET+ PPRPP K V Y GL +Q VV +L+DP VCVTVTGE GSGK E AIQACDYVR+RHHFD+ LWAD +AA E ++ GAS +S + LIG+A GMP PGP T +EL +F+FK+ + +G QKVLLVL+ VDSLFE DA+DR++ LLS+LCSMG LKLL TSE L R N FR GSE V ++ P
Sbjct: 134 DGAAREFATVFYDALIKH--EVTVKRAFDTALICINA---HRCPPKHEEDLFLLLPKGEEKSFGCCTAERLRLGRFQHAPFQEDQPFVVEHVGGKLVDETRQVPPRPPCKKAVSSYMGLVRVQFVVRLLLDPQTVCVTVTGEPGSGKTELAIQACDYVRERHHFDSFLWADCDKAALD-----ACPETFFVIPNSPNGASGDSVSLEDLCRLIGVAIGMPQPGPSTANELHQFIFKNPNTDSGQPFQKVLLVLDNVDSLFERDEDAQDRLVHLLSDLCSMGGGGHLKLLATSEYKLLRG-NGYFRGGSEMVATVKP 438
BLAST of mRNA_H-canaliculatus_F_contig13141.2592.1 vs. uniprot
Match: A0A6H5JN51_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN51_9PHAE) HSP 1 Score: 151 bits (381), Expect = 4.870e-42 Identity = 80/146 (54.79%), Postives = 97/146 (66.44%), Query Frame = 1
Query: 118 SNNSRPQGEHFLLLPAGGNHDVRIFDTLPEGDFVDETKMPPPRPPGAKPVPFYKGLEELQKVVGMLVDPVVVCVTVTGERGSGKRERAIQACDYVRKRHHFDAVLWADLRRAA----------PPFGAR------ATYEEPCRLVR 507
SN+ P + + AGGNHD+RIF+TLPEG VDET P PRPP K VP +KGL +Q+VV +L++P CVTVTGE GSGK ERAIQACDYVR+RHHFD+ LWAD +AA PF A + +E+PCRLVR
Sbjct: 14 SNHRPPALPPAVRVHAGGNHDIRIFETLPEGQLVDETHPPTPRPPCKKAVPSFKGLAGVQQVVRLLLNPQAACVTVTGEHGSGKTERAIQACDYVRERHHFDSFLWADCDKAAFNSCSDKSSGHPFFALQNCLNDSAWEDPCRLVR 159
BLAST of mRNA_H-canaliculatus_F_contig13141.2592.1 vs. uniprot
Match: A0A7S0DT24_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DT24_9EUKA) HSP 1 Score: 90.1 bits (222), Expect = 1.080e-16 Identity = 63/153 (41.18%), Postives = 84/153 (54.90%), Query Frame = 1
Query: 1 DQAAQQFATLFYDALMSETRRYTVQEAFDIALHLVNATNSNNSRPQGEHFLLLPAGGNHDVRIFDTLPEGDFVDETKMPPPRP-PGAKPVPFYKGLEELQKVVGMLVDPVVVCVTVTGERGSGKRERAIQACDYVRKRHHF-DAVLWADLRRA 453
D+AA F T FY ALM T V+EAF IA + V A ++ + + E +LLLPA GNHDVRI++ +P G D T P P P +G E VV +VD +T+TGE G G+RE A+ A Y +R F D V++ DL R+
Sbjct: 155 DKAALTFTTQFYLALMVNT----VKEAFQIAKNSV-ANLTDYGKGESEKYLLLPANGNHDVRIYEDIPRGTMSDHTSPPSVNNLPAVSPNLLGRG-EATHAVVSRIVDQKSRVITLTGEAGIGRREVAVAASQYAVQRQIFADGVVYIDLSRS 301
BLAST of mRNA_H-canaliculatus_F_contig13141.2592.1 vs. uniprot
Match: D8LEZ2_ECTSI (SH2 domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEZ2_ECTSI) HSP 1 Score: 90.1 bits (222), Expect = 1.510e-16 Identity = 57/152 (37.50%), Postives = 87/152 (57.24%), Query Frame = 1
Query: 1 DQAAQQFATLFYDALMSETRRYTVQEAFDIALHLVNATNSNNSRPQ-GEHFLLLPAGGNHDVRIFDTLPEGDFVDETKMPPPRPPGAKPVPFYKGLEELQKVVGMLVDPVVVCVTVTGERGSGKRERAIQACDYVRKRHHFDAVLWADLRRA 453
D A +FA FY +L+ R TV+ AF + +A + +P+ G FLLLP G+HD+ +F+ +P+G FVD T + PP A F+ ++QKVV +V V CVT+TG++G GK + ++AC Y R+R+ F + + L RA
Sbjct: 117 DHKAAEFAKSFYASLL---RGDTVRRAFLLG----SACLEGSDQPEEGHKFLLLPPEGDHDIPVFEEVPDGQFVDATPLKPPYRCDAVTQYFWGRAVDVQKVVKHMVSGVP-CVTITGQKGIGKTQVLLKACAYTRERNVFGEIFFCRLDRA 260
BLAST of mRNA_H-canaliculatus_F_contig13141.2592.1 vs. uniprot
Match: A0A6H5JKD1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKD1_9PHAE) HSP 1 Score: 85.5 bits (210), Expect = 1.810e-16 Identity = 51/98 (52.04%), Postives = 65/98 (66.33%), Query Frame = 1
Query: 580 MPLPGPETEDELIRFLFKSHS--AGHKVQKVLLVLEKVDSLFEAGGDARDRVLKLLSNLCSMGE--QLKLLVTSEQSLQRDTNERFRHGSERVRSLSP 861
M PGP +E EL +F+FK+ + +G QKVLLVL+ VDSL E GDA+DR+++ L NLCSMG+ LKLL TSE L NE FR G+E V + P
Sbjct: 1 MSQPGPNSEQELHQFIFKNPNTDSGQPFQKVLLVLDSVDSLLERDGDAQDRLVQFLCNLCSMGDGGHLKLLATSEHKLL-SGNEFFRGGTEMVARVEP 97
BLAST of mRNA_H-canaliculatus_F_contig13141.2592.1 vs. uniprot
Match: A0A6H5KXM6_9PHAE (SH2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXM6_9PHAE) HSP 1 Score: 77.4 bits (189), Expect = 3.240e-12 Identity = 40/100 (40.00%), Postives = 61/100 (61.00%), Query Frame = 1
Query: 154 LLPAGGNHDVRIFDTLPEGDFVDETKMPPPRPPGAKPVPFYKGLEELQKVVGMLVDPVVVCVTVTGERGSGKRERAIQACDYVRKRHHFDAVLWADLRRA 453
LLP G+HD+ +F+ +P+G FVD T + PP A F+ ++QKVV +V V CVT+TG++G GK + ++AC Y R+R+ F + + L RA
Sbjct: 390 LLPLEGDHDIPVFEEVPDGQFVDATPLKPPYRCDAVTQYFWGRAVDVQKVVKHMVSGVP-CVTITGQKGIGKTQVLLKACAYTRERNVFGEIFFCRLDRA 488 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13141.2592.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig13141.2592.1 >prot_H-canaliculatus_F_contig13141.2592.1 ID=prot_H-canaliculatus_F_contig13141.2592.1|Name=mRNA_H-canaliculatus_F_contig13141.2592.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=287bp DQAAQQFATLFYDALMSETRRYTVQEAFDIALHLVNATNSNNSRPQGEHFback to top mRNA from alignment at H-canaliculatus_F_contig13141:498..3206- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig13141.2592.1 ID=mRNA_H-canaliculatus_F_contig13141.2592.1|Name=mRNA_H-canaliculatus_F_contig13141.2592.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2709bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13141:498..3206- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig13141:498..3206- >mRNA_H-canaliculatus_F_contig13141.2592.1 ID=mRNA_H-canaliculatus_F_contig13141.2592.1|Name=mRNA_H-canaliculatus_F_contig13141.2592.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1722bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13141:498..3206- (Hapterophycus canaliculatus Oshoro5f female)back to top |