mRNA_H-canaliculatus_F_contig13140.2591.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig13140.2591.1 vs. uniprot
Match: A0A6H5KYW9_9PHAE (CULLIN_2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYW9_9PHAE) HSP 1 Score: 225 bits (573), Expect = 2.500e-67 Identity = 109/123 (88.62%), Postives = 118/123 (95.93%), Query Frame = 1
Query: 1 RRLAWAHSLGTVTIRAKYKKSYDLLVTTLQACCLMVFSEDTNTLALGEVSQRLHLPDDTVKRILHSLSCGKYKVLKREGEGGSIKATDKFAFNSAFSCPLRKLRIPMASLEESHNPKRVEEDR 369
RRL W+H+LG VTIRAKY+KSYDL VTTLQACCLMVFSE+T+ L LGEVSQRLHLPDDTVKRILHSLSCGKYKVLKREG+GGSIKATDKFAFN++F+CPLRKLRIPMASLEESHNPKRVEEDR
Sbjct: 556 RRLGWSHTLGNVTIRAKYQKSYDLQVTTLQACCLMVFSEETSMLVLGEVSQRLHLPDDTVKRILHSLSCGKYKVLKREGQGGSIKATDKFAFNASFNCPLRKLRIPMASLEESHNPKRVEEDR 678
BLAST of mRNA_H-canaliculatus_F_contig13140.2591.1 vs. uniprot
Match: D7FJN2_ECTSI (CULLIN_2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJN2_ECTSI) HSP 1 Score: 214 bits (544), Expect = 3.130e-65 Identity = 105/123 (85.37%), Postives = 114/123 (92.68%), Query Frame = 1
Query: 1 RRLAWAHSLGTVTIRAKYKKSYDLLVTTLQACCLMVFSEDTNTLALGEVSQRLHLPDDTVKRILHSLSCGKYKVLKREGEGGSIKATDKFAFNSAFSCPLRKLRIPMASLEESHNPKRVEEDR 369
RRL W+H+LG VTIRAKY+KSYDL VTTLQAC LMVFS++TNTL LGEVSQRLHLPDDTVKRILHSLSCGK KVLKREG+GG IKATDKFAFN++ +CPLRK RIPMASLEESHNPKRVEEDR
Sbjct: 291 RRLGWSHTLGNVTIRAKYQKSYDLQVTTLQACYLMVFSKETNTLVLGEVSQRLHLPDDTVKRILHSLSCGKCKVLKREGQGGRIKATDKFAFNASVNCPLRKFRIPMASLEESHNPKRVEEDR 413
BLAST of mRNA_H-canaliculatus_F_contig13140.2591.1 vs. uniprot
Match: A0A835YLK2_9STRA (Cullin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLK2_9STRA) HSP 1 Score: 178 bits (451), Expect = 7.420e-50 Identity = 88/125 (70.40%), Postives = 103/125 (82.40%), Query Frame = 1
Query: 1 RRLAWAHSLGTVTIRAKYKK--SYDLLVTTLQACCLMVFSEDTNTLALGEVSQRLHLPDDTVKRILHSLSCGKYKVLKREGEGGSIKATDKFAFNSAFSCPLRKLRIPMASLEESHNPKRVEEDR 369
RRLAW HSLG V+++A Y K +YDL VTTLQAC LMVFS +T L L V+QRL++P++ KRILHSLSCGK+KVL REGEG +IK TDKF FN F+CP+RK+RIPMASLEESHNPKRVEEDR
Sbjct: 555 RRLAWMHSLGNVSVKATYPKGKTYDLQVTTLQACALMVFSTETEMLPLDAVTQRLNVPEEVCKRILHSLSCGKFKVLSREGEGATIKNTDKFGFNLKFTCPMRKIRIPMASLEESHNPKRVEEDR 679
BLAST of mRNA_H-canaliculatus_F_contig13140.2591.1 vs. uniprot
Match: A0A7S4DET0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DET0_HETAK) HSP 1 Score: 145 bits (365), Expect = 4.780e-41 Identity = 68/124 (54.84%), Postives = 96/124 (77.42%), Query Frame = 1
Query: 1 RRLAWAHSLGTVTIRAKY-KKSYDLLVTTLQACCLMVFSEDTNTLALGEVSQRLHLPDDTVKRILHSLSCGKYKVLKREGEGGSIKATDKFAFNSAFSCPLRKLRIPMASLEESHNPKRVEEDR 369
RRLAW HSLG T+RA Y +K+YD+ V TLQA L +F+ + L + +R +LP++ +KR+LHSLSCGK+K+L++ EGG+I+ D F +N+ F+CP+RKLR+PMA+L++SHNPKRVEEDR
Sbjct: 47 RRLAWVHSLGNATLRATYGRKAYDVQVATLQAVALALFNR-ADELDFPTLQERTNLPEEVLKRVLHSLSCGKFKLLRKSSEGGAIRPGDAFRYNAGFACPMRKLRVPMAALDQSHNPKRVEEDR 169
BLAST of mRNA_H-canaliculatus_F_contig13140.2591.1 vs. uniprot
Match: A0A4D9DID3_9STRA (CULLIN_2 domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DID3_9STRA) HSP 1 Score: 144 bits (364), Expect = 9.710e-38 Identity = 69/124 (55.65%), Postives = 90/124 (72.58%), Query Frame = 1
Query: 1 RRLAWAHSLGTVTIRAKY-KKSYDLLVTTLQACCLMVFSEDTNTLALGEVSQRLHLPDDTVKRILHSLSCGKYKVLKREGEGGSIKATDKFAFNSAFSCPLRKLRIPMASLEESHNPKRVEEDR 369
RRLAW HSLG+ T+RAKY K+YDL TLQA L+ F D +L L + +RL++P + +K +LHSLSCG+YK+LK++ IK TD F N +FSCP R +RIPMA++EESHNP R+EEDR
Sbjct: 568 RRLAWQHSLGSATLRAKYGSKTYDLQTNTLQAVLLLSFQSDEESLGLSTLKERLNVPTEQMKPLLHSLSCGRYKILKKQPASDKIKETDTFTINPSFSCPQRVIRIPMATIEESHNPNRIEEDR 691
BLAST of mRNA_H-canaliculatus_F_contig13140.2591.1 vs. uniprot
Match: W4FZI7_9STRA (CULLIN_2 domain-containing protein n=7 Tax=Aphanomyces TaxID=100860 RepID=W4FZI7_9STRA) HSP 1 Score: 142 bits (358), Expect = 6.130e-37 Identity = 76/125 (60.80%), Postives = 91/125 (72.80%), Query Frame = 1
Query: 1 RRLAWAHSLGTVTIRAKY--KKSYDLLVTTLQACCLMVFSEDTNTLALGEVSQRLHLPDDTVKRILHSLSCGKYKVLKREGEGGSIKATDKFAFNSAFSCPLRKLRIPMASLEESHNPKRVEEDR 369
RRL W HSLG T+RA Y KK YDL VTTLQA L +F+ D + L ++ + L++ D VKRILHSLSCGK+KV+K+ E SI TD F N+AF+ P+RKLRIPMASLEESHNPK VEEDR
Sbjct: 548 RRLQWVHSLGNATVRATYANKKWYDLQVTTLQAVALELFNTDAS-LTFDQLQESLNVSPDVVKRILHSLSCGKFKVVKKTPENKSIATTDTFQANAAFASPVRKLRIPMASLEESHNPKHVEEDR 671
BLAST of mRNA_H-canaliculatus_F_contig13140.2591.1 vs. uniprot
Match: A0A7S1G733_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G733_9STRA) HSP 1 Score: 142 bits (357), Expect = 8.470e-37 Identity = 64/123 (52.03%), Postives = 91/123 (73.98%), Query Frame = 1
Query: 1 RRLAWAHSLGTVTIRAKYKKSYDLLVTTLQACCLMVFSEDTNTLALGEVSQRLHLPDDTVKRILHSLSCGKYKVLKREGEGGSIKATDKFAFNSAFSCPLRKLRIPMASLEESHNPKRVEEDR 369
R+L+W HSLGT T++A YKK Y+L VTTLQA L++F+E ++ ++ L++ ++ KR+LHSLSCGKY+ LK+ +G +I D FAFN FSC +++RIPM SL+E+HNPKRV+EDR
Sbjct: 552 RKLSWVHSLGTATLKATYKKGYELQVTTLQAVVLLLFNERDGAVSFEDIRSALNVDEEVAKRLLHSLSCGKYQALKKTPKGRTISTDDTFAFNDGFSCSYKRIRIPMPSLDETHNPKRVQEDR 674
BLAST of mRNA_H-canaliculatus_F_contig13140.2591.1 vs. uniprot
Match: A0A7S4E958_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E958_9STRA) HSP 1 Score: 137 bits (345), Expect = 1.550e-36 Identity = 68/127 (53.54%), Postives = 93/127 (73.23%), Query Frame = 1
Query: 1 RRLAWAHSLGTVTIRAKY-KKSYDLLVTTLQACCLMVFSE---DTNTLALGEVSQRLHLPDDTVKRILHSLSCGKYKVLKREGEGGSIKATDKFAFNSAFSCPLRKLRIPMASLEESHNPKRVEEDR 369
RR+ W SLG +++A + KK+YDL V TLQA L+ F+ + TL +V++R++LPD+ +KR+LHSL+CGKYKVL + + TD FA N+ FSCP+RK+R+PMASL+ESHNPKRVEEDR
Sbjct: 197 RRVTWMWSLGNASVKAFFGKKAYDLQVATLQAIVLLTFNPVDGASQTLTYAQVAERVNLPDEHLKRVLHSLACGKYKVLAKTPMSSRVALTDSFAVNTKFSCPMRKIRVPMASLDESHNPKRVEEDR 323
BLAST of mRNA_H-canaliculatus_F_contig13140.2591.1 vs. uniprot
Match: H3HCN3_PHYRM (CULLIN_2 domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=H3HCN3_PHYRM) HSP 1 Score: 138 bits (348), Expect = 3.290e-36 Identity = 72/125 (57.60%), Postives = 89/125 (71.20%), Query Frame = 1
Query: 1 RRLAWAHSLGTVTIRAKY--KKSYDLLVTTLQACCLMVFSEDTNTLALGEVSQRLHLPDDTVKRILHSLSCGKYKVLKREGEGGSIKATDKFAFNSAFSCPLRKLRIPMASLEESHNPKRVEEDR 369
RRL W HSLG T+RA + KK YDL VTTLQA L++F+E L+ V + L+L D VKRI+HSLSCGKYK+L + G +I +D+FA N F+ P+RKLRIPMASLEESH+ K VEEDR
Sbjct: 318 RRLQWVHSLGNATVRANFPKKKWYDLQVTTLQAVALLLFNEGEGALSFEAVRESLNLTVDVVKRIMHSLSCGKYKLLTKTPAGKTISTSDQFAVNRTFASPMRKLRIPMASLEESHSQKNVEEDR 442
BLAST of mRNA_H-canaliculatus_F_contig13140.2591.1 vs. uniprot
Match: A0A024UBL5_9STRA (CULLIN_2 domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UBL5_9STRA) HSP 1 Score: 139 bits (350), Expect = 7.620e-36 Identity = 73/125 (58.40%), Postives = 92/125 (73.60%), Query Frame = 1
Query: 1 RRLAWAHSLGTVTIRAKY--KKSYDLLVTTLQACCLMVFSEDTNTLALGEVSQRLHLPDDTVKRILHSLSCGKYKVLKREGEGGSIKATDKFAFNSAFSCPLRKLRIPMASLEESHNPKRVEEDR 369
RRL W HSLG T+RA Y KK YDL VTTLQA L++F+ D +L ++ + L++ D +KRILHSLSCGK+KV+K+ E +I TD F N++F+ P+RKLRIPMASLEESHNPK VEEDR
Sbjct: 547 RRLQWIHSLGNATVRATYANKKWYDLQVTTLQAVALVLFNTD-ESLTFDQLQESLNVSPDILKRILHSLSCGKFKVVKKTPENKNIATTDTFQANASFASPVRKLRIPMASLEESHNPKHVEEDR 670 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13140.2591.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig13140.2591.1 >prot_H-canaliculatus_F_contig13140.2591.1 ID=prot_H-canaliculatus_F_contig13140.2591.1|Name=mRNA_H-canaliculatus_F_contig13140.2591.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=125bp RRLAWAHSLGTVTIRAKYKKSYDLLVTTLQACCLMVFSEDTNTLALGEVSback to top mRNA from alignment at H-canaliculatus_F_contig13140:1749..3056- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig13140.2591.1 ID=mRNA_H-canaliculatus_F_contig13140.2591.1|Name=mRNA_H-canaliculatus_F_contig13140.2591.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1308bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13140:1749..3056- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig13140:1749..3056- >mRNA_H-canaliculatus_F_contig13140.2591.1 ID=mRNA_H-canaliculatus_F_contig13140.2591.1|Name=mRNA_H-canaliculatus_F_contig13140.2591.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=750bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13140:1749..3056- (Hapterophycus canaliculatus Oshoro5f female)back to top |