prot_H-canaliculatus_F_contig1312.2578.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1312.2578.1
Unique Nameprot_H-canaliculatus_F_contig1312.2578.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length462
Homology
BLAST of mRNA_H-canaliculatus_F_contig1312.2578.1 vs. uniprot
Match: D8LJ71_ECTSI (Ubiquitin-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ71_ECTSI)

HSP 1 Score: 290 bits (741), Expect = 3.650e-90
Identity = 210/405 (51.85%), Postives = 249/405 (61.48%), Query Frame = 0
Query:    1 MLPRRGYEPVDDGDEENTNASHAITGSHLNDNTGAEEERSARRLCNSVTENDAIGKEKAQST--TNNDEEGAGALGSGNEGGDNGMAIRVLDVRGVFYPLRGLTPETTVRELKLMLVTETGVEMERQRIIHAGKMLEDTDTFASRKISDGTTIHLFQRPKTAVTNSVRNRDGAGSGAILEQQPGGLHEFPPIYLQVN---GGGDGAGGAAGSPSHWEVDGARRKLRFLASFLLLISILQXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEAQQLILSDEYWALEQARAVSSAMGIVVGLVGIRSSQSLSIRTIKIYLVGLVMCALVAMAIRIQMFFDIISGKLPFDD-GVGSPSSSSDYEPDEGAGXXXXXXX------GGEAYDETAGEAGIRMFFTAFSSSISV 393
            MLPRRGYEPVDD DE++     A   S        + E SA  LC+SV            S+   N+   GAG + S     D  M +RVLDVRG FYPLR +TPET+VRELKLMLV   GVE+ RQRIIH GKML D DT   RKISDG  IHLFQRPK A   +      AG G    QQPG LHEFPP+ LQV    G G+GAG      +HWEV+  RRK+ FLAS L+LIS+LQ    X            XXXXXXXXXXX     L    EYW L + R +SS MGIVVG +G+R SQSL+  TI+ Y VGLVMCA+VAMAIRI++F+DI++GK+PF D G+ SP SS + +P EG  XXXXXXX      G  A+ ETA  A   +FF AFS+ +SV
Sbjct:    1 MLPRRGYEPVDDVDEDSAPDLQAAAASERXXXXHVQGELSA--LCSSVPXXXXXXXXXXXSSDGVNSRTAGAGEVRSDXXXXDGRMTVRVLDVRGQFYPLR-VTPETSVRELKLMLVDAAGVEVPRQRIIHGGKMLSDADTLGGRKISDGAAIHLFQRPKVAAAAA------AGVGTASAQQPGNLHEFPPVLLQVQERGGNGEGAG------AHWEVEAPRRKIMFLASILVLISVLQLLECXASISTVLSVPGAXXXXXXXXXXXSAHPSL--PGEYWFLVKGRTLSSVMGIVVGTLGVRGSQSLNTHTIRWYFVGLVMCAIVAMAIRIEVFYDIVTGKIPFGDYGINSPDSSRENDPGEGXXXXXXXXXXXXXEGGPGAHHETAEAAQSSLFFMAFSAFVSV 388          
BLAST of mRNA_H-canaliculatus_F_contig1312.2578.1 vs. uniprot
Match: A0A6H5JCL3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCL3_9PHAE)

HSP 1 Score: 224 bits (572), Expect = 1.880e-65
Identity = 162/372 (43.55%), Postives = 199/372 (53.49%), Query Frame = 0
Query:  132 KMLEDTDTFASRKISDGTTIHLFQRPKTAVTNSVRNRDGAGSGAILEQQPGGLHEFPPIYLQ-VNGGGDGAGGAAGSPSHWEVDGARRKLRFLASFLLLISILQXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEAQQLILSDEYWALEQARAVSSAMGIVVGLVGIRSSQSLSIRTIKIYLVGLVMCALVAMAIRIQMFFDIISGKLPFDD-GVGSPSSSSDYEPDEGAGXXXXXXX------GGEAYDETAGEAGIRMFFTAFSSSISV-----------------------------------------LVSGIIWVLCIRRVNSVRGFIHQHTGAWERQERGEGPEGGGARHGGGRLMDAASDPELQER 454
            +ML D DT  SRKISDG  IHLFQRPK A   +      AG G    QQPG L+EFPP+ LQ +  GGD  G  A    HWEV+  RRK+ FLAS L+LIS+LQ                            G +    L  EYW L + R +SS MGIVVG +G+  SQSL+  TI+ Y VGLVMCA+VAMAIRI++F+D ++GK+PF D G  SP SS + +P EG  XXXXXXX      G  A+ E A EA   + F A S+ +SV                                         +VSG +W++CIRRV+ +R  I  H   WERQERGEG EG   R GGG L +A SDPEL+ R
Sbjct:   29 QMLSDADTLGSRKISDGAAIHLFQRPKVAAAAA------AGVGTASAQQPGNLYEFPPVLLQPLERGGDREGAGA----HWEVEAPRRKIMFLASILVLISVLQLLECLASTSTVLSVPGAGGGSTGGDN--GGSAHPSLPGEYWFLVRGRTLSSVMGIVVGTLGVCGSQSLNTHTIRWYFVGLVMCAIVAMAIRIEVFYDTVTGKIPFGDYGTNSPDSSRENDPGEGGXXXXXXXXXXXDEGGPGAHHEAAEEAQSSLVFMALSAFVSVSPARARGRSVPGQFFFDVAVVPPRMKRKVVAPLRTGCEKRVVVSGTLWMICIRRVHDMRRVISIHVANWERQERGEGLEG---REGGG-LTNAISDPELESR 384          
BLAST of mRNA_H-canaliculatus_F_contig1312.2578.1 vs. uniprot
Match: A0A6H5JH29_9PHAE (Ubiquitin-like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH29_9PHAE)

HSP 1 Score: 87.4 bits (215), Expect = 7.500e-17
Identity = 60/133 (45.11%), Postives = 70/133 (52.63%), Query Frame = 0
Query:    1 MLPRRGYEPVDDGDEENTNASHAITGSHLNDNTGAEEERSARRLCNSVTENDAIGKEKAQSTTNNDEEGAGALGSGNEGGDNGMAIRVLDVRGVFYPLRGLTPETTVRELKLMLVTETGVEMERQRIIHAGKM 133
            MLPRRGYEPVDD DE++     A                               GK       N+    AG + S +E  D  M +RVLDVRG FYPLR +TPET+VRELKLMLV   GVE+ RQRIIH GK+
Sbjct:    1 MLPRRGYEPVDDVDEDSAPDMQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXTG-GKGNGSDGVNSRTAEAGEVRSDDEDDDGRMTVRVLDVRGQFYPLR-VTPETSVRELKLMLVDAAGVEVPRQRIIHGGKV 131          
BLAST of mRNA_H-canaliculatus_F_contig1312.2578.1 vs. uniprot
Match: A0A4D9DFL8_9STRA (Ubiquitin-like domain-containing protein n=4 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DFL8_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 3.620e-9
Identity = 99/376 (26.33%), Postives = 155/376 (41.22%), Query Frame = 0
Query:   58 KAQSTTNNDEEGAGALGSGNEGGDNGMAIRVLDVRGVFYPLRGLTPETTVRELKLMLVTETGVEMERQRIIHAGKMLEDTDTFASRKISDGTTIHLFQRPKT---AVTNSVRNRDGAGSGAILEQQPGGLHEFPPIYLQVNGGGDGAGGAAGSPSHWEVDGARRKLRFLASFLLLISILQXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEAQQLILSDEYW-----------ALEQARAVSSAMGIVVGLVGIRSSQSLSIRTIKIYLVGLVMCALVAMAIRIQMFFDIISGKLPFDDGVGSPSSSSDYEPDEGAGXXXXXXXGGEAYDETAGEAGIRMFFTAFSSSISVLVSGIIWVLCIRRVNSVRGFIHQHTG 419
            +A S  + D E    L      G     IR+LD  G  + L   TP +T+  LK+ +   +GV   +QR+I AG+ML+D  T  S  +  G  IHLF RP         S+ +     SGA  E   GG+   P  +L   G       + G P   E+  +   ++  +S L+ I  +Q                          XX                        AL   + + + +G+ VGLVGIRS+ +L +++ K+Y+ GL++     MA RI   + + S  L +D  VG   S+S         XXXXXXX  EAY +   + G  ++      S+S  +  ++W +C  R +     + +  G
Sbjct:    8 RALSEESYDVEALSGLDGQGPSGPPQFPIRILDTHGKEHALDAETPLSTIGALKVKVQAASGVPPAQQRLIFAGRMLQDQQTLRSCGVEAGCVIHLFARPPPXXXGAPGSIASVVNTTSGAGTE---GGM-VGPGTHLNPYG----LPSSFGDP---ELIRSTHSVKLFSSCLVAICAMQLLLLGLQMLAAWSMGAGGGGEVPAPGXXXXXXXXXXXXXXXXXXXXXXXXXSALLILQVMMNTLGLYVGLVGIRSANTLQLQSTKVYVYGLLVVGTAWMASRI--IWAVNSVNLGYDVDVGPQPSASXXXXXXXXXXXXXXXXXXEAYRQM--DRGELIYMV----SLSCFLYSLVWGVCFMRASQFYTLVRRANG 364          
BLAST of mRNA_H-canaliculatus_F_contig1312.2578.1 vs. uniprot
Match: A0A0G4H0V3_VITBC (Ubiquitin-like domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4H0V3_VITBC)

HSP 1 Score: 58.2 bits (139), Expect = 9.430e-6
Identity = 35/98 (35.71%), Postives = 50/98 (51.02%), Query Frame = 0
Query:   81 DNGMAIRVLDVRGVFYPLRGLTPETTVRELKLMLVTETGVEMERQRIIHAGKMLEDTDTFASRKISDGTTIHLFQRPKTAVTNSVRNRDGAGSGAILE 178
            DNGM I V  + G    L  +TP  TV E+K  +    G+  ++QR+I AGK LED    A   I  G T+HL  R +  + +    R+G GS  + +
Sbjct:   92 DNGMQITVAHLSGKRSVL-DVTPYDTVEEVKAKIQDREGIPPDQQRLIFAGKQLEDGRLLADYNIRHGATLHLVLRLRGGMFHISSGREGWGSAEMTD 188          
BLAST of mRNA_H-canaliculatus_F_contig1312.2578.1 vs. uniprot
Match: A0A397S0Y0_9GLOM (Uncharacterized protein n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=A0A397S0Y0_9GLOM)

HSP 1 Score: 56.2 bits (134), Expect = 5.500e-5
Identity = 30/74 (40.54%), Postives = 43/74 (58.11%), Query Frame = 0
Query:   83 GMAIRVLDVRGVFYPLRGLTPETTVRELKLMLVTETGVEMERQRIIHAGKMLEDTDTFASRKISDGTTIHLFQR 156
            G  I V  + G       +TPET + ++K M+  +TGVE E+QR++ AGK LED  T    KI + +T+HL  R
Sbjct:    2 GFQIYVNGLEGRTTTYNDITPETKIIDIKKMVKDKTGVETEQQRLLFAGKQLEDNFTTRHYKIIERSTLHLVVR 75          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1312.2578.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LJ71_ECTSI3.650e-9051.85Ubiquitin-like domain-containing protein n=1 Tax=E... [more]
A0A6H5JCL3_9PHAE1.880e-6543.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JH29_9PHAE7.500e-1745.11Ubiquitin-like domain-containing protein n=1 Tax=E... [more]
A0A4D9DFL8_9STRA3.620e-926.33Ubiquitin-like domain-containing protein n=4 Tax=M... [more]
A0A0G4H0V3_VITBC9.430e-635.71Ubiquitin-like domain-containing protein n=2 Tax=V... [more]
A0A397S0Y0_9GLOM5.500e-540.54Uncharacterized protein n=1 Tax=Glomus cerebriform... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000626Ubiquitin domainSMARTSM00213ubq_7coord: 84..156
e-value: 2.3E-8
score: 43.8
IPR000626Ubiquitin domainPFAMPF00240ubiquitincoord: 101..157
e-value: 7.6E-12
score: 44.8
IPR000626Ubiquitin domainPROSITEPS50053UBIQUITIN_2coord: 101..160
score: 15.993
NoneNo IPR availableGENE3D3.10.20.90coord: 76..166
e-value: 5.0E-14
score: 53.8
NoneNo IPR availablePANTHERPTHR10677:SF3FI07626P-RELATEDcoord: 103..178
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 280..297
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 331..381
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 382..403
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..225
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 247..279
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 298..308
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 226..246
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 404..461
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 309..330
NoneNo IPR availableTMHMMTMhelixcoord: 222..244
NoneNo IPR availableTMHMMTMhelixcoord: 382..404
NoneNo IPR availableTMHMMTMhelixcoord: 307..329
IPR015496UbiquilinPANTHERPTHR10677UBIQUILINcoord: 103..178
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 81..157

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1312contigH-canaliculatus_F_contig1312:20107..23736 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1312.2578.1mRNA_H-canaliculatus_F_contig1312.2578.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1312 18508..23789 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1312.2578.1 ID=prot_H-canaliculatus_F_contig1312.2578.1|Name=mRNA_H-canaliculatus_F_contig1312.2578.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=462bp
MLPRRGYEPVDDGDEENTNASHAITGSHLNDNTGAEEERSARRLCNSVTE
NDAIGKEKAQSTTNNDEEGAGALGSGNEGGDNGMAIRVLDVRGVFYPLRG
LTPETTVRELKLMLVTETGVEMERQRIIHAGKMLEDTDTFASRKISDGTT
IHLFQRPKTAVTNSVRNRDGAGSGAILEQQPGGLHEFPPIYLQVNGGGDG
AGGAAGSPSHWEVDGARRKLRFLASFLLLISILQLLGCLASISAAASTST
TGDNGDSGEAGEGEAQQLILSDEYWALEQARAVSSAMGIVVGLVGIRSSQ
SLSIRTIKIYLVGLVMCALVAMAIRIQMFFDIISGKLPFDDGVGSPSSSS
DYEPDEGAGGGTGAGSGGEAYDETAGEAGIRMFFTAFSSSISVLVSGIIW
VLCIRRVNSVRGFIHQHTGAWERQERGEGPEGGGARHGGGRLMDAASDPE
LQERHASSVEA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029071Ubiquitin-like_domsf
IPR015496Ubiquilin
IPR000626Ubiquitin_dom