prot_H-canaliculatus_F_contig1312.2577.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1312.2577.1
Unique Nameprot_H-canaliculatus_F_contig1312.2577.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length204
Homology
BLAST of mRNA_H-canaliculatus_F_contig1312.2577.1 vs. uniprot
Match: D8LJ72_ECTSI (Photosystem II 11 kDa protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJ72_ECTSI)

HSP 1 Score: 327 bits (837), Expect = 8.040e-112
Identity = 181/206 (87.86%), Postives = 189/206 (91.75%), Query Frame = 0
Query:    1 MKTFAACTLALVASDFASAFTGPLVAGSGATSIARS-SSTAVCMSVGDEGMSRKNAIAAFSAGAAALLGAAAVPAVVFA-EEAAAPAATAVSE-GPPTDWGLTKQYYPDAAKMVKHMRYCTNMEKGDPNMADIANNCKKEMVEFVSNYRRSDNINGKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLLQEYTDIERAIKRQR 203
            MKTFAACT+ALVA D A+AFTGPL A +GATS     SS+AVCMSVGDE MSRKNAIAAFSAGAAA+LGAAAVPA VFA EEAAAPA  AVSE GPP+DWGLTKQYYPDA+KMV+HMRYCTNMEKGDP MADIANNCKKEMVEFVSNYRRS NINGKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLLQEYTDIERAIKRQR
Sbjct:    1 MKTFAACTIALVAGDLAAAFTGPLAARTGATSXXXXXSSSAVCMSVGDEAMSRKNAIAAFSAGAAAVLGAAAVPAAVFAAEEAAAPAPAAVSEDGPPSDWGLTKQYYPDASKMVRHMRYCTNMEKGDPYMADIANNCKKEMVEFVSNYRRSSNINGKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLLQEYTDIERAIKRQR 206          
BLAST of mRNA_H-canaliculatus_F_contig1312.2577.1 vs. uniprot
Match: A0A836C8X1_9STRA (Photosystem II Pbs27-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8X1_9STRA)

HSP 1 Score: 177 bits (448), Expect = 5.270e-53
Identity = 92/138 (66.67%), Postives = 112/138 (81.16%), Query Frame = 0
Query:   68 GAAAV-PAVVFAEEAAAPAATAVSEGP-PTDWGLTKQYYPDAAKMVKHMRYCTNMEKGDPNMADIANNCKKEMVEFVSNYRRSDNINGKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLLQEYTDIERAIKRQR 203
            GAAAV PA+  A +   PA   V  GP P DWGLTK YY DA+K+V HMRY T+MEKG  N+ ++A NC++EM++FVS YRR  N++GKLSYSNLYTSI+VLAGHYASYGPKFPVPEKRRKRL++EY+ I++AIKRQR
Sbjct:   48 GAAAVAPALAIAADGT-PAVEKVPLGPMPVDWGLTKDYYTDASKVVSHMRYATSMEKGAANIENVAKNCRQEMIDFVSYYRRFPNVSGKLSYSNLYTSINVLAGHYASYGPKFPVPEKRRKRLMEEYSQIDKAIKRQR 184          
BLAST of mRNA_H-canaliculatus_F_contig1312.2577.1 vs. uniprot
Match: A0A836CEQ5_9STRA (Photosystem II Pbs27-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEQ5_9STRA)

HSP 1 Score: 174 bits (440), Expect = 1.240e-51
Identity = 96/145 (66.21%), Postives = 114/145 (78.62%), Query Frame = 0
Query:   60 SAGAAALLGAAAVPAVVFAEEAAAPAATAVSEGP-PTDWGLTKQYYPDAAKMVKHMRYCTNMEKGDPNMADIANNCKKEMVEFVSNYRRSDNINGKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLLQEYTDIERAIKRQR 203
            S  AAA+  A+A  A  FAE+AA PA   +  GP PTDWGLTK YY DA+K+V HMRY T++EKG   +   A NC++EM++FVS YRR  N++GKLSYSNLYTSI+VLAGHYASYGPKFPVPEKRRKRLL+EY  IE+AIKRQR
Sbjct:   55 STAAAAMTVASAFVAPAFAEDAA-PAKAPL--GPMPTDWGLTKDYYTDASKVVSHMRYATSLEKGAAGIEMTAKNCRQEMIDFVSYYRRFPNVSGKLSYSNLYTSINVLAGHYASYGPKFPVPEKRRKRLLEEYNQIEKAIKRQR 196          
BLAST of mRNA_H-canaliculatus_F_contig1312.2577.1 vs. uniprot
Match: A0A7S3ZPN6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZPN6_9STRA)

HSP 1 Score: 163 bits (413), Expect = 2.200e-48
Identity = 83/131 (63.36%), Postives = 102/131 (77.86%), Query Frame = 0
Query:   77 FAEEA-AAPAATAVSEGP---PTDWGLTKQYYPDAAKMVKHMRYCTNMEKGDPNMADIANNCKKEMVEFVSNYRRSDNINGKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLLQEYTDIERAIKRQR 203
            FA++A AAP A A +  P   P DWG+T  YY DAAK+V HMR  T++EKG PNM  IA NCKKEM++FVS YRR  N++GK S+S LYT+I+VLAGHY SYGPKFPVPEKRRKRL QEY ++E+ IK++R
Sbjct:    4 FADDAPAAPPAEAEAPAPVEFPKDWGITSDYYTDAAKVVAHMRLATSLEKGAPNMEMIALNCKKEMIDFVSFYRRFTNVSGKQSFSTLYTAINVLAGHYTSYGPKFPVPEKRRKRLFQEYAEVEKNIKKRR 134          
BLAST of mRNA_H-canaliculatus_F_contig1312.2577.1 vs. uniprot
Match: A0A7R9U8B8_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U8B8_9STRA)

HSP 1 Score: 162 bits (410), Expect = 6.120e-47
Identity = 81/129 (62.79%), Postives = 98/129 (75.97%), Query Frame = 0
Query:   75 VVFAEEAAAPAATAVSEGPPTDWGLTKQYYPDAAKMVKHMRYCTNMEKGDPNMADIANNCKKEMVEFVSNYRRSDNINGKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLLQEYTDIERAIKRQR 203
            +  A+E AAPA+T +   PPTDWGL+ QYY DA ++V HMRY T M K  PN   IA NCKKEM++FVS YRR  N+ GK S+S LYT+I+VLAGHY +YG KFPVPEKR+KRLLQEY +IE+ IKR R
Sbjct:   81 MAVADEVAAPASTELGP-PPTDWGLSNQYYDDAVRVVNHMRYATIMPKSTPNYEAIATNCKKEMIDFVSFYRRFPNVAGKPSFSTLYTAINVLAGHYTNYGVKFPVPEKRKKRLLQEYAEIEKNIKRSR 208          
BLAST of mRNA_H-canaliculatus_F_contig1312.2577.1 vs. uniprot
Match: A0A7S2UVY8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVY8_9STRA)

HSP 1 Score: 162 bits (410), Expect = 8.230e-47
Identity = 83/133 (62.41%), Postives = 103/133 (77.44%), Query Frame = 0
Query:   74 AVVFAEEAAAPAATAVSE--GP-PTDWGLTKQYYPDAAKMVKHMRYCTNMEKGDPNMADIANNCKKEMVEFVSNYRRSDNINGKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLLQEYTDIERAIKRQR 203
            A  FAEEA APAA       GP PTD+ +  +YYPDA  +VK+MRY T M+KG PNM  I  + +K+MV+FV+ YRR++ +NG+LSYS LYTSI+VLAGHYASYGPKFPVPEKRRKRLLQEY DIE+ +++ R
Sbjct:   86 AAAFAEEAVAPAAAPAKPDMGPVPTDFKVKGEYYPDAILLVKNMRYATLMDKGTPNMEQIGKSVRKQMVDFVAQYRRNNKVNGRLSYSTLYTSINVLAGHYASYGPKFPVPEKRRKRLLQEYNDIEKNMRKNR 218          
BLAST of mRNA_H-canaliculatus_F_contig1312.2577.1 vs. uniprot
Match: A0A7S1XRA0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XRA0_9STRA)

HSP 1 Score: 157 bits (397), Expect = 4.970e-45
Identity = 73/110 (66.36%), Postives = 89/110 (80.91%), Query Frame = 0
Query:   94 PTDWGLTKQYYPDAAKMVKHMRYCTNMEKGDPNMADIANNCKKEMVEFVSNYRRSDNINGKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLLQEYTDIERAIKRQR 203
            PTDWGLT +YY DA ++V HMRY T+M KG PN  +IA +CKKEM++FVS YRR  N+ GK S+S LYT+I+VLAGHY +YG KFPVPEKR+KRL QEY +IE+ IKRQR
Sbjct:   95 PTDWGLTNEYYKDAPRVVSHMRYATSMPKGTPNYENIAKSCKKEMIDFVSFYRRFPNVAGKPSFSTLYTAINVLAGHYTNYGLKFPVPEKRKKRLFQEYAEIEKNIKRQR 204          
BLAST of mRNA_H-canaliculatus_F_contig1312.2577.1 vs. uniprot
Match: W7TYA6_9STRA (Photosystem ii 11 kd protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TYA6_9STRA)

HSP 1 Score: 149 bits (375), Expect = 6.850e-42
Identity = 79/145 (54.48%), Postives = 105/145 (72.41%), Query Frame = 0
Query:   60 SAGAAALLGAAAVPAVVFAEEAAAPAATAVSEG-PPTDWGLTKQYYPDAAKMVKHMRYCTNMEKGDPNMADIANNCKKEMVEFVSNYRRSDNINGKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLLQEYTDIERAIKRQR 203
            ++G AA+ G + V   + AEE   P A  V  G PP ++ L+K+YY DAA++V HM+Y T M +  PN  +IA + K EM +FVS YRR +N+ GK S+S LYT+I+V+AGHYASYGPKFP+PEKRRKRL QE+T+I+R IKR R
Sbjct:   46 TSGVAAMAGLSLVLPALAAEEGGVPTAAPVDLGVPPVNFDLSKEYYKDAAQVVNHMKYATFMNRDTPNYENIAKSVKNEMTDFVSYYRRFNNVAGKPSFSTLYTAINVMAGHYASYGPKFPIPEKRRKRLQQEFTEIDRNIKRNR 190          
BLAST of mRNA_H-canaliculatus_F_contig1312.2577.1 vs. uniprot
Match: A0A7S3NKQ6_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NKQ6_9STRA)

HSP 1 Score: 144 bits (364), Expect = 2.540e-40
Identity = 74/121 (61.16%), Postives = 92/121 (76.03%), Query Frame = 0
Query:   83 APAATAVSEGPPTDWGLTKQYYPDAAKMVKHMRYCTNMEKGDPNMADIANNCKKEMVEFVSNYRRSDNINGKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLLQEYTDIERAIKRQR 203
            AP A  V+E P T++G+T+ YY DAAK+V HMR  T+++KG PN+  IA   KKEM  FV+ YRR   + GK S+S LYT+I+VLAGHY SYGPKFPVPEKRRKRL QEY +IE+ IKR+R
Sbjct:   64 APPAPVVAELP-TNYGITQDYYTDAAKVVAHMRLATSLDKGSPNIEQIAIETKKEMNAFVAFYRRFTTVTGKQSFSTLYTAINVLAGHYTSYGPKFPVPEKRRKRLYQEYDEIEKNIKRKR 183          
BLAST of mRNA_H-canaliculatus_F_contig1312.2577.1 vs. uniprot
Match: A0A7S2RL20_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RL20_9STRA)

HSP 1 Score: 142 bits (359), Expect = 3.410e-39
Identity = 70/111 (63.06%), Postives = 85/111 (76.58%), Query Frame = 0
Query:   94 PTDWGLT-KQYYPDAAKMVKHMRYCTNMEKGDPNMADIANNCKKEMVEFVSNYRRSDNINGKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLLQEYTDIERAIKRQR 203
            P +WG+T K YY DA ++V HM+Y T MEKG  NM  I  N KKEMV+FVS YRR +N+ GK S+S LYT+I+VLAGHY SYG KFPVPEKRRKRL QEY +I++ IK+ R
Sbjct:  103 PKEWGITGKDYYYDAQRVVDHMKYATAMEKGTSNMDSINKNMKKEMVDFVSFYRRFNNVAGKQSFSTLYTAINVLAGHYTSYGTKFPVPEKRRKRLFQEYAEIDKYIKKSR 213          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1312.2577.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJ72_ECTSI8.040e-11287.86Photosystem II 11 kDa protein n=2 Tax=Ectocarpus T... [more]
A0A836C8X1_9STRA5.270e-5366.67Photosystem II Pbs27-domain-containing protein n=1... [more]
A0A836CEQ5_9STRA1.240e-5166.21Photosystem II Pbs27-domain-containing protein n=1... [more]
A0A7S3ZPN6_9STRA2.200e-4863.36Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7R9U8B8_9STRA6.120e-4762.79Hypothetical protein n=2 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2UVY8_9STRA8.230e-4762.41Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S1XRA0_9STRA4.970e-4566.36Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
W7TYA6_9STRA6.850e-4254.48Photosystem ii 11 kd protein n=2 Tax=Monodopsidace... [more]
A0A7S3NKQ6_9STRA2.540e-4061.16Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S2RL20_9STRA3.410e-3963.06Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 185..203
NoneNo IPR availablePANTHERPTHR34041:SF1PHOTOSYSTEM II REPAIR PROTEIN PSB27-H1, CHLOROPLASTICcoord: 36..203
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..203
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.674
NoneNo IPR availableTMHMMTMhelixcoord: 56..78
IPR038450Photosystem II Pbs27 superfamilyGENE3D1.20.58.810coord: 92..203
e-value: 6.5E-40
score: 137.6
IPR025585Photosystem II Pbs27PFAMPF13326PSII_Pbs27coord: 64..199
e-value: 4.6E-29
score: 101.6
IPR025585Photosystem II Pbs27PANTHERPTHR34041FAMILY NOT NAMEDcoord: 36..203
IPR025585Photosystem II Pbs27HAMAPMF_01481PSII_Psb27coord: 61..199
score: 24.616

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1312contigH-canaliculatus_F_contig1312:13943..18353 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1312.2577.1mRNA_H-canaliculatus_F_contig1312.2577.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1312 13943..18353 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1312.2577.1 ID=prot_H-canaliculatus_F_contig1312.2577.1|Name=mRNA_H-canaliculatus_F_contig1312.2577.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=204bp
MKTFAACTLALVASDFASAFTGPLVAGSGATSIARSSSTAVCMSVGDEGM
SRKNAIAAFSAGAAALLGAAAVPAVVFAEEAAAPAATAVSEGPPTDWGLT
KQYYPDAAKMVKHMRYCTNMEKGDPNMADIANNCKKEMVEFVSNYRRSDN
INGKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLLQEYTDIERAIK
RQR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025585PSII_Pbs27
IPR038450PSII_Pbs27_sf