prot_H-canaliculatus_F_contig1311.2570.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1311.2570.1
Unique Nameprot_H-canaliculatus_F_contig1311.2570.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length325
Homology
BLAST of mRNA_H-canaliculatus_F_contig1311.2570.1 vs. uniprot
Match: D8LPM7_ECTSI (RPA_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPM7_ECTSI)

HSP 1 Score: 367 bits (941), Expect = 9.280e-124
Identity = 192/266 (72.18%), Postives = 223/266 (83.83%), Query Frame = 0
Query:   61 KQSILAVNVKQVLESEMSNQDSGAKIDGVDVAQVKLVGCIVEMEDASTNTEYTIEDTTGRLKVKMFHSDGEGGSDRSAEKRARNQVGTYVQVYGNVRSWKGDRHSVAYTMQPISDMNEVTMHTLEIIYTHLFNTKGALPGKAAVGGGAAVAQPMNGVGSPGFHGSSSQQGFTSPSNNMSG-------GNMSSNQADAKGFSTVQQKVHDMFLGSNDEQGRSIKDVAGALQSSGSGISFQDVSDAVSFLSSEGHLYSTIDDDHYRST 319
            +QS+L+VN+KQVLESEM+NQDSGAKIDG DV+Q+KLVGCIVE+++ASTNTEYT+EDTTGRLKVKMFH+DGEG +DR+AEKRAR QVGTYV+V+GNVRSWK DRHSVAYTM PI+DM+EVT+H LE IYTHLFNTKG LPGKA+  GGA VAQPMNGVGSPGF+G SSQ GFTSP NN           N + +   +KGF+ +QQKVHD FLG+++EQGRSI +VA +L   G  IS  DVS AV FLSSEGHLYSTIDDDHYRST
Sbjct:   64 QQSLLSVNIKQVLESEMANQDSGAKIDGADVSQIKLVGCIVEVDEASTNTEYTVEDTTGRLKVKMFHNDGEGANDRAAEKRARCQVGTYVRVFGNVRSWKDDRHSVAYTMTPITDMDEVTLHALETIYTHLFNTKGPLPGKASTFGGAGVAQPMNGVGSPGFNGGSSQHGFTSPGNNXXXXXXXXMYNNSNMDPEGSKGFTPIQQKVHDQFLGADEEQGRSIAEVADSLTREG--ISRTDVSTAVQFLSSEGHLYSTIDDDHYRST 327          
BLAST of mRNA_H-canaliculatus_F_contig1311.2570.1 vs. uniprot
Match: A0A835YU42_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU42_9STRA)

HSP 1 Score: 188 bits (477), Expect = 3.030e-54
Identity = 113/268 (42.16%), Postives = 161/268 (60.07%), Query Frame = 0
Query:   58 NKEKQSILAVNVKQVLESEMSNQDSGAKIDGVDVAQVKLVGCIVEMEDASTNTEYTIEDTTGRLKVKMFHSDGEGGSDRSAEKRARNQVGTYVQVYGNVRSWKGDRHSVAYTMQPISDMNEVTMHTLEIIYTHLFNTKGAL---PGKAAVG-GGAAVAQPMN--GVGSPGFHGSSSQQGFTSPSNNMSGGNMSSNQADAKGFSTVQQKVHDMFLGSNDEQGRSIKDVAGALQSSGSGISFQDVSDAVSFLSSEGHLYSTIDDDHYRST 319
            ++EKQSI+ + +KQVLES+  N D   K+DGV++  V+LVGCI+++ + STN  + IED TGR+  K+F    E  S    E+R+R + G YV V G ++ W+   H  A+ ++P+ D N++T H LE IY HL NT G L   PG AA G GGAA AQPM     GSPGF    ++QG  +   N    N    + D+   + + QK+ D+F    +  G S+   A  L+  G  I + D+ DAV +LSSEGH+Y+T+DD HY+ST
Sbjct:   31 SREKQSIMPLTIKQVLESQHDNPDDKPKVDGVEIVHVRLVGCIIDINEHSTNAVFKIEDGTGRIDAKVFIEQDE--SQLQTERRSRCREGVYVAVVGQIKRWQDKLHVHAFDIRPLEDTNQITQHFLEAIYAHLHNTLGPLRKAPGGAAGGIGGAAGAQPMAVANYGSPGF----ARQGGAAQQGNYGAFNGGGGEMDSNNLAPLHQKLLDIFQADTNPHGLSLDYCADVLKPQG--IGYDDIRDAVVYLSSEGHIYTTVDDFHYKST 290          
BLAST of mRNA_H-canaliculatus_F_contig1311.2570.1 vs. uniprot
Match: A0A7S3AZ16_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AZ16_9EUKA)

HSP 1 Score: 135 bits (341), Expect = 7.110e-34
Identity = 96/265 (36.23%), Postives = 149/265 (56.23%), Query Frame = 0
Query:   58 NKEKQSILAVNVKQVLES-EMSNQDSGAKIDGVDVAQVKLVGCIVEMEDASTNTEYTIEDTTGRLKVKMFHSDGEGGSDRSAEKRARNQVGTYVQVYGNVRSWKGDRHSVAYTMQPISDMNEVTMHTLEIIYTHLFNTKGALPGKAAVGGGAAVAQPMNGVGSPGFHGSSSQQGFTSPSNNMSGGNMSSNQADAKGFSTVQQKVHDMFL--GSNDEQGRSIKDVAGALQSSGSGISFQDVSDAVSFLSSEGHLYSTIDDDHYRST 319
            N++KQS++   +KQ+  +   SN ++   IDG D+ Q+ +VG I   ++ +TN +Y+++D T  + VKM+  D E   +   E+RA+ + G  V+V G +R++   +  VAY++QPI++ NE T H +++++THL  TKG  P    V  G     PMNG G     G + QQG    + N+  G   ++         V   V   F   G   + G +I DV GA+  S   IS Q V +AV FL++EGHLYSTIDDDH+++T
Sbjct:   67 NRDKQSLIPATIKQLKNAVPASNGEASFMIDGADLHQITIVGLITSADEQATNLQYSVDDGTDHIMVKMW-IDAEA-DESFQERRAQWKEGVVVRVIGQLRAFNNSKSVVAYSIQPITNFNEYTFHFIDVVHTHLKATKGK-PVGVGVPRGIMGGFPMNGGG---MGGPAMQQGMAQAAPNVPTGGAPAD---------VNNLVLSFFKTKGEASDMGCTIGDVVGAV--SAQNISEQRVREAVEFLTNEGHLYSTIDDDHFKAT 314          
BLAST of mRNA_H-canaliculatus_F_contig1311.2570.1 vs. uniprot
Match: A0A7S2B4J1_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B4J1_9STRA)

HSP 1 Score: 133 bits (335), Expect = 8.360e-34
Identity = 95/243 (39.09%), Postives = 137/243 (56.38%), Query Frame = 0
Query:   81 DSGAKIDGVDVAQVKLVGCIVEMEDASTNTEYTIEDTTGRLKVKMFHSDGEGGSDRSAEKRARNQVGTYVQVYGNVRSWKGDRHSVAYTMQPISDMNEVTMHTLEIIYTHLFNTKGAL-PGKAAVGGGAAVAQPMNGVGSPGFHGSSSQQGFTSPSNNMSGGNMSSNQADAKG-FSTVQQKVHDMFLGSND-EQGRSIKDVAGALQSSGSGISFQDVSDAVSFLSSEGHLYSTIDDDHYRSTA 320
            DS  K+DG D+ Q+KLVG I+ +E+ ST   Y IED TG +  K++   G+  +D  AEKRA  + G+YV+  G +R ++G+     Y M+P++D NE+T H LE IY HL NTKG+   G+              GVG           GF +P+ N +  +  ++     G FSTVQ +V   F  +   E+G SI D   +L ++G     Q V + V FLS+EGHLYSTIDD+H++ST+
Sbjct:   11 DSNYKVDGQDIHQLKLVGNILSIEEHSTYAVYKIEDGTGVVDCKLWIDAGDSEAD--AEKRALCRQGSYVRAVGVLRDFQGNASVQLYDMRPVTDHNEITHHMLEAIYVHLQNTKGSKNAGQPXXXXXXXXXXXXXGVG-----------GFNAPAVNTNLNSAMASDGQGSGDFSTVQTEVLAYFTNNGSGEEGASINDAVKSLCANGHHD--QAVRETVEFLSNEGHLYSTIDDEHFKSTS 238          
BLAST of mRNA_H-canaliculatus_F_contig1311.2570.1 vs. uniprot
Match: F0YKH3_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YKH3_AURAN)

HSP 1 Score: 132 bits (333), Expect = 1.820e-33
Identity = 98/270 (36.30%), Postives = 145/270 (53.70%), Query Frame = 0
Query:   59 KEKQSILAVNVKQVLES-EMSNQDSGAKIDGVDVAQVKLVGCIVEMEDASTNTEYTIEDTTGRLKVKMFHSDGEGGSDRSAEKRARNQV-GTYVQVYGNVRSWKGDRHSVAYTMQPISDMNEVTMHTLEIIYTHLFNTKGALPGKAAVGGGAAVAQPMNGVGSPGFHGSSSQQGFTSPSNNMSGGNMSSNQADAKG---FSTVQQKVHDMFL--GSNDEQGRSIKDVAGALQSSGSGISFQDVSDAVSFLSSEGHLYSTIDDDHYRSTAE 321
            ++KQS++ + +KQVL + + + +D G  +DG +V QV++VG I+  +   T   YTIED TG L+  M+ +  E G+  + E+RA   V G+YV V G ++ + G  +  AY ++PI D NE+T H LE IY+H   T     G    GGGAA      G  +P                  SGG +S++  D  G    +  Q KV + +   G+ DE G ++  VA +L      +    V   V FLSSEGHLYSTIDDDH++ST++
Sbjct:    2 RDKQSLIPMTIKQVLSATKAAGEDDGFAVDGREVNQVRVVGNILRQDKKETKHVYTIEDQTGMLECTMWVNQEEAGA--TVEERAEKMVNGSYVCVIGGLKEYNGKLNVSAYDVRPIEDFNEITHHYLEAIYSHAKQTNAIKTG----GGGAAAPASAFGAFNP------------------SGGRVSADAMDTSGDGGMTADQTKVFNFYTTEGTGDE-GCNVNSVASSLA-----MDLNQVKHIVEFLSSEGHLYSTIDDDHHKSTSD 241          
BLAST of mRNA_H-canaliculatus_F_contig1311.2570.1 vs. uniprot
Match: A0A7S0HR69_9EUKA (Hypothetical protein n=2 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HR69_9EUKA)

HSP 1 Score: 133 bits (334), Expect = 1.130e-32
Identity = 94/264 (35.61%), Postives = 145/264 (54.92%), Query Frame = 0
Query:   61 KQSILAVNVKQVLESEMSNQDSGAKIDGVDVAQVKLVGCIVEMEDASTNTEYTIEDTTGRLKVKMFHSDGEGGSDRSA-EKRARNQVGTYVQVYGNVRSWKGDRHSVAYTMQPISDMNEVTMHTLEIIYTHLFNTKGALPGKAAVGGGAAVAQPMNGVGSPGFHGSSSQQGFT--SPSNNMSGGNMSSNQADAKGFSTVQQKVHDMFLG-SNDEQGRSIKDVAGALQSSGSGISFQDVSDAVSFLSSEGHLYSTIDDDHYRSTA 320
            KQS+    +KQ+  +  S  D+G  +DG D+ QV +VG I   ++ +TN +YT++D T  + VKM+    +  +D +A EKRA+ + G  V+V G +R++   R  VA+ +QP++D NE T H +E+++THL NTKGA   + A   GA +A    GV + G  G  + QG    +P    +          A G ++ Q  V   F   +  + G +I D   A+   G  ++   V  AV  L +EGHLYSTIDD+HY++TA
Sbjct:   88 KQSLAPCTIKQLKNAPASGGDNGFSVDGKDLHQVTIVGLITHADEQNTNLQYTVDDGTDSINVKMWI---DAATDEAAMEKRAQWREGAVVRVIGQMRAFNQVRSIVAFHIQPLTDFNEYTFHFIEVVHTHLRNTKGAAAEQGAPAAGAGMAGASMGV-AGGMAGGMAPQGGAGFAPQAGFA----------ANGAASTQDTVMKYFTSYAETDIGCTISDCVNAMAPQG--VTDAQVRTAVEALVNEGHLYSTIDDEHYKATA 335          
BLAST of mRNA_H-canaliculatus_F_contig1311.2570.1 vs. uniprot
Match: A0A8J2SFF3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SFF3_9STRA)

HSP 1 Score: 130 bits (328), Expect = 2.460e-32
Identity = 96/267 (35.96%), Postives = 142/267 (53.18%), Query Frame = 0
Query:   59 KEKQSILAVNVKQVLESEMS-NQDSGAKIDGVDVAQVKLVGCIVEMEDASTNTEYTIEDTTGRLKVKMFHSDGEGGSDRSAEKRARNQVGTYVQVYGNVRSWKGDRHSVAYTMQPISDMNEVTMHTLEIIYTHLFNTKGALPGKAAVGGGAAVAQPMNGVGSPGFHGSSSQQGFTSPSNNMSGGNMSSNQAD-AKGFSTVQQKVHDMFL--GSNDEQGRSIKDVAGALQSSGSGISFQDVSDAVSFLSSEGHLYSTIDDDHYRSTAE 321
            ++KQ++  V +KQ+  +E     D G KID  ++  V++V C+   E   T   Y IED TG ++V  + +D +     + +K A+   G YV V+GN++ + G     AY M+P+ D N+VT H LE IY H         GK  V  GAA A   + +   GFH        T+   + +GG      AD A G +++Q++V D +   G+ DE G +   VA +L     G+    V  AV FLSSEGHLYSTID+DH++ST+E
Sbjct:   39 RDKQTLTPVTIKQLQSAEKGVGDDDGYKIDNAEIHSVRVVACVQTDEVRETKATYNIEDGTGSVEVTFWLNDAQDEDSWARQKLAKMTPGAYVVVHGNIKEYDGRLTISAYDMRPVEDFNQVTHHYLEAIYVHAKRV-----GKIQVSSGAAPAAKRDSM--AGFH-------PTTHGQSAAGG------ADGADGMTSLQKRVLDYYTENGTGDE-GCNTDSVAASL-----GLDLGQVKAAVEFLSSEGHLYSTIDEDHHKSTSE 279          
BLAST of mRNA_H-canaliculatus_F_contig1311.2570.1 vs. uniprot
Match: A0A7S2SSA9_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SSA9_9STRA)

HSP 1 Score: 129 bits (323), Expect = 2.170e-31
Identity = 83/262 (31.68%), Postives = 142/262 (54.20%), Query Frame = 0
Query:   58 NKEKQSILAVNVKQVLESEMSNQDSGAKIDGVDVAQVKLVGCIVEMEDASTNTEYTIEDTTGRLKVKMFHSDGEGGSDRSAEKRARNQVGTYVQVYGNVRSWKGDRHSVAYTMQPISDMNEVTMHTLEIIYTHLFNTKGALPGKAAVGGGAAVAQPMNGVGSPGFHGSSSQQGFTSPSNNMSGGNMSSNQADAKGFSTVQQKVHDMFLGSNDEQGRSIKDVAGALQSSGSGISFQDVSDAVSFLSSEGHLYSTIDDDHYRST 319
            ++++Q+++   ++Q+  + + + D   KIDGV++AQV+LV  ++++ + ST   Y +ED TG ++VKM++   E  ++ +A +RA  + G YV+++  ++ + G     A  ++P+ D NE+T H LE IY HL +T+G     A   G  + +   +G G+ GF+          P NN+S        +   GF+ VQ K  +     +   G  +   A   Q   SG     V  AV FL+SEGHLYST+D++HY+ T
Sbjct:   51 SRDRQTVIPFTIRQIKGATIGHADDPVKIDGVELAQVRLVANVMQVTEQSTYVVYDVEDCTGMIQVKMWNDQDE--NEMTATRRAACRQGVYVRIHAYLKVFNGQISVTAVDIRPVEDQNEITCHMLEAIYIHLQHTQGPKQAPATAAGWNSTS---SGFGTGGFN--------PPPGNNLSSTMALEGVSGNSGFTPVQAKALEAVNQIDSMDGPGVHVQAIVQQLGTSGFDAGAVRAAVEFLASEGHLYSTVDEEHYKVT 299          
BLAST of mRNA_H-canaliculatus_F_contig1311.2570.1 vs. uniprot
Match: UPI0018D7AD94 (replication protein A 32 kDa subunit-like n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D7AD94)

HSP 1 Score: 127 bits (320), Expect = 4.330e-31
Identity = 89/265 (33.58%), Postives = 142/265 (53.58%), Query Frame = 0
Query:   57 RNKEKQSILAVNVKQVLESEMSNQDSGAKIDGVDVAQVKLVGCIVEMEDASTNTEYTIEDTTGRLKVKMFHSDGEGGSDRSAEKRARNQVGTYVQVYGNVRSWKGDRHSVAYTMQPISDMNEVTMHTLEIIYTHLFNTKGALPGKAAVGGGAAVAQPMNGVGSPGFHGSSSQQGFTSPSNN--MSGGNMSSNQADAKGFSTVQQKVHDMFLGSNDEQGRSIKDVAGALQSSGSGISFQDVSDAVSFLSSEGHLYSTIDDDHYRST 319
            + K  Q+++   + QVL++  +  D   KI  V++ QV +VG I ++E A+TN  Y ++D TG L       D +  +    + +   +  TYV+V GN+R++ G R    + ++P++DMNE+T+H LE ++TH+  TK            +A A   +  GS           FT+PS     S     S  A A G + VQ +VH +    +D+QG SI  +A +L+    G  F  + +A+ FLS+EGH+YSTIDDDH++ST
Sbjct:   47 KGKRAQNLIPCTIAQVLQA--TQVDEHFKIGEVEIYQVSIVGLIRQVEMAATNILYKLDDRTGPLLDIRQWIDNDENTPEEMQPQVHRE-NTYVKVIGNIRTFGGKRSIAPFKIKPLTDMNELTLHMLETVHTHMLLTKRK----------SAEASTSSNFGS---------NQFTTPSKGGMASTSGFGSVAAPANGLNNVQGQVHQLITACHDDQGVSINYLATSLK----GTPFNKIREALEFLSNEGHIYSTIDDDHFKST 285          
BLAST of mRNA_H-canaliculatus_F_contig1311.2570.1 vs. uniprot
Match: A0A0G4IWY4_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IWY4_PLABS)

HSP 1 Score: 127 bits (318), Expect = 8.450e-31
Identity = 84/261 (32.18%), Postives = 140/261 (53.64%), Query Frame = 0
Query:   63 SILAVNVKQVLESEMSNQDSGAKIDGVDVAQVKLVGCIVEMEDASTNTEYTIEDTTGRLKVKMFHSDGEGGSDRSAEKRARNQVGTYVQVYGNVRSWKGDRHSVAYTMQPISDMNEVTMHTLEIIYTHLFNTKGALPGKAAVGGGAAVAQPMN-GVGSPGFHGSSSQQGFTSPSNNMSGGNMSSNQADAKGFSTVQQKVHDMFLGS-NDEQGRSIKDVAGALQSSGSGISFQDVSDAVSFLSSEGHLYSTIDDDHYRSTAE 321
            ++  V +KQ+L +E S  +S   +D  ++ QVK+VGCI++++  STN  YTI+D+TG ++V+++ +D +  S++    R+    G YV VYG V+ +   ++   ++++P++D NE+  H      THL N +G           AA  QP   GV +P         GF   + N              G + +Q  + D+F+ S + + G SI++V   L  S    S+Q V   ++++S+EGHLYST DDDHYR T +
Sbjct:   61 TLTPVTIKQILTAEPSTTESKFMVDKRELNQVKIVGCIIKVQVQSTNVAYTIDDSTGVIEVRLWQNDSDDDSEQVRMLRSALVEGVYVHVYGKVQEYNSVKNITGFSIRPLTDHNEIASHLAHAALTHLQNVRGV----------AAHQQPRGAGVDAP-------VVGFQRSATN--------------GLTPLQNAIMDVFVQSVSGDNGLSIQEVQRMLPGS---YSYQQVQKDIAWMSNEGHLYSTCDDDHYRPTGQ 287          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1311.2570.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LPM7_ECTSI9.280e-12472.18RPA_C domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A835YU42_9STRA3.030e-5442.16Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3AZ16_9EUKA7.110e-3436.23Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A7S2B4J1_9STRA8.360e-3439.09Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
F0YKH3_AURAN1.820e-3336.30Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A7S0HR69_9EUKA1.130e-3235.61Hypothetical protein n=2 Tax=Phaeocystis antarctic... [more]
A0A8J2SFF3_9STRA2.460e-3235.96Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2SSA9_9STRA2.170e-3131.68Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
UPI0018D7AD944.330e-3133.58replication protein A 32 kDa subunit-like n=1 Tax=... [more]
A0A0G4IWY4_PLABS8.450e-3132.18Uncharacterized protein n=1 Tax=Plasmodiophora bra... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.50.140coord: 56..195
e-value: 2.4E-39
score: 136.0
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 246..322
e-value: 1.9E-19
score: 71.2
IPR014892Replication protein A, C-terminalPFAMPF08784RPA_Ccoord: 190..314
e-value: 1.1E-12
score: 48.5
IPR040260Replication factor A protein-likePANTHERPTHR13989REPLICATION PROTEIN A-RELATEDcoord: 18..319
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 251..319
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 64..195

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1311contigH-canaliculatus_F_contig1311:15914..22642 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1311.2570.1mRNA_H-canaliculatus_F_contig1311.2570.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1311 15632..23589 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1311.2570.1 ID=prot_H-canaliculatus_F_contig1311.2570.1|Name=mRNA_H-canaliculatus_F_contig1311.2570.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=325bp
MSYGGFEYGGGGGGGGFDGGGGGGGGGFGSPSAGGGGYMAGGSSDSPAGG
GGGGGQRNKEKQSILAVNVKQVLESEMSNQDSGAKIDGVDVAQVKLVGCI
VEMEDASTNTEYTIEDTTGRLKVKMFHSDGEGGSDRSAEKRARNQVGTYV
QVYGNVRSWKGDRHSVAYTMQPISDMNEVTMHTLEIIYTHLFNTKGALPG
KAAVGGGAAVAQPMNGVGSPGFHGSSSQQGFTSPSNNMSGGNMSSNQADA
KGFSTVQQKVHDMFLGSNDEQGRSIKDVAGALQSSGSGISFQDVSDAVSF
LSSEGHLYSTIDDDHYRSTAEDQG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012340NA-bd_OB-fold
IPR036390WH_DNA-bd_sf
IPR040260RFA2-like
IPR014892RPA_C
IPR036388WH-like_DNA-bd_sf