mRNA_H-canaliculatus_F_contig13106.2567.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig13106.2567.1 vs. uniprot
Match: D7G656_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G656_ECTSI) HSP 1 Score: 222 bits (565), Expect = 2.970e-68 Identity = 134/178 (75.28%), Postives = 144/178 (80.90%), Query Frame = 1
Query: 10 QNTGRWTYDEHRLFLRGLDLHGKGWKKIASLIKTRTVVQIRTHAQKYFQKIAKAKQNGDHGEVAMDSKGNVPRRKTKGRRLRLRMEDMLRGSTAVAPSLQPYVAGAGAVETGLYRFLSPVTIQARILSHAESQPSGCPDVERPPTAGHGAGTGGVGGAXXXXXXXX----GASLSSQL 531
+NTGRWTYDEHRLFLRGL+LHGKGWKKIASLIKTRTVVQIRTHAQKYFQKIAKAKQNG+HG+VAMDSKG+ RRK++GRR RMED+LRGSTAVAPSLQPYVAGAGAVETGLYRFLSP+TIQ D+ERPP A AG GG XXXXXXXX GASL SQL
Sbjct: 4 KNTGRWTYDEHRLFLRGLELHGKGWKKIASLIKTRTVVQIRTHAQKYFQKIAKAKQNGEHGDVAMDSKGHGSRRKSRGRR---RMEDLLRGSTAVAPSLQPYVAGAGAVETGLYRFLSPITIQ---------------DLERPPAA---AGQGGTAXXXXXXXXXXXXXGGASLQSQL 160
BLAST of mRNA_H-canaliculatus_F_contig13106.2567.1 vs. uniprot
Match: A0A6H5L4H1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4H1_9PHAE) HSP 1 Score: 211 bits (536), Expect = 5.970e-60 Identity = 105/121 (86.78%), Postives = 115/121 (95.04%), Query Frame = 1
Query: 1 PLSQNTGRWTYDEHRLFLRGLDLHGKGWKKIASLIKTRTVVQIRTHAQKYFQKIAKAKQNGDHGEVAMDSKGNVPRRKTKGRRLRLRMEDMLRGSTAVAPSLQPYVAGAGAVETGLYRFLS 363
P+ +NTGRWTYDEHRLFLRGL+LHGKGWKKIASLIKTRTVVQIRTHAQKYFQKIAKAKQNG+HG+VAMDSKG+ RRK++GRR RMED+LRGSTAVAPSLQPYVAGAGAVETGLYRFL+
Sbjct: 569 PVKENTGRWTYDEHRLFLRGLELHGKGWKKIASLIKTRTVVQIRTHAQKYFQKIAKAKQNGEHGDVAMDSKGHGSRRKSRGRR---RMEDLLRGSTAVAPSLQPYVAGAGAVETGLYRFLA 686
BLAST of mRNA_H-canaliculatus_F_contig13106.2567.1 vs. uniprot
Match: A0A6U4FI15_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4FI15_9STRA) HSP 1 Score: 137 bits (345), Expect = 2.120e-35 Identity = 78/126 (61.90%), Postives = 93/126 (73.81%), Query Frame = 1
Query: 10 QNTGRWTYDEHRLFLRGLDLHGKGWKKIASLIKTRTVVQIRTHAQKYFQKIAKAKQNG-DHGEVAMDSKGNVPRRKTKGRRLRLRMEDMLRGSTAVAPSLQPYVAGAG---AVETGLYRFLSPVTI 375
+NTGRW+Y+EHRLFL+GL++HGKGWKKIA LIKTRTVVQIRTHAQKYFQK+AKAKQ G + G V +D + GR+ R L G TAVAPSLQPY+ G +VE+GLY+FLSP I
Sbjct: 29 ENTGRWSYEEHRLFLKGLEMHGKGWKKIAELIKTRTVVQIRTHAQKYFQKLAKAKQGGAEPGAVLLD--------RGLGRKNGKRKSGSLEG-TAVAPSLQPYMTLPGVNGSVESGLYKFLSPNVI 145
BLAST of mRNA_H-canaliculatus_F_contig13106.2567.1 vs. uniprot
Match: W7TWM0_9STRA (SANT/Myb domain protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TWM0_9STRA) HSP 1 Score: 135 bits (340), Expect = 7.360e-34 Identity = 90/191 (47.12%), Postives = 114/191 (59.69%), Query Frame = 1
Query: 10 QNTGRWTYDEHRLFLRGLDLHGKGWKKIASLIKTRTVVQIRTHAQKYFQKIAKAKQNGDHGEV-AMD-SKGNVPRRKTKGRRLRLRMEDMLRG----STAVAPSLQPYVAGA----------------GAVETGLYRFLSPVTIQARILSHAESQPSGCPDVERPPTAGHGAGTGGVGGAXXXXXXXXGAS 516
+NTGRWT +EH LFL+GL++HGKGWKKIA LIKTRTVVQIRTHAQKYFQK+AKAK+NG HG++ M+ ++ R K G+R L L G S A++P+LQ Y+ G+ A+E GLYRFLSPV + A A + + P+V P T G G GV GA G+S
Sbjct: 98 ENTGRWTCEEHVLFLKGLEMHGKGWKKIAKLIKTRTVVQIRTHAQKYFQKLAKAKKNGHHGDMLGMEGTRFGGKRVKFTGKRRGLVYGSYLVGAEATSAAISPALQSYMPGSWAGREEGEALSDKEEDAAIEKGLYRFLSPVVLDAA----ASNLDATAPEVLPPSTPGTGVHANGVVGADGETTEEDGSS 284
BLAST of mRNA_H-canaliculatus_F_contig13106.2567.1 vs. uniprot
Match: A0A8J9S9N3_PHATR (Hypothetical protein (Fragment) n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9S9N3_PHATR) HSP 1 Score: 121 bits (303), Expect = 2.070e-30 Identity = 55/71 (77.46%), Postives = 66/71 (92.96%), Query Frame = 1
Query: 10 QNTGRWTYDEHRLFLRGLDLHGKGWKKIASLIKTRTVVQIRTHAQKYFQKIAKAKQNGDHGEVAMDSKGNV 222
+NTGRWT +EHRLFL+GL+ HGKGWKKIASLIK+RTVVQIRTHAQKYFQK+AKA+QNG+ G+VAM+ +G V
Sbjct: 115 ENTGRWTAEEHRLFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAKARQNGEEGDVAMEGRGGV 185
BLAST of mRNA_H-canaliculatus_F_contig13106.2567.1 vs. uniprot
Match: A0A7S1V9A3_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1V9A3_9STRA) HSP 1 Score: 121 bits (304), Expect = 5.180e-29 Identity = 55/71 (77.46%), Postives = 66/71 (92.96%), Query Frame = 1
Query: 10 QNTGRWTYDEHRLFLRGLDLHGKGWKKIASLIKTRTVVQIRTHAQKYFQKIAKAKQNGDHGEVAMDSKGNV 222
+NTGRWT DEHRLFL+GL+ HGKGWKKIASLIK+RTVVQIRTHAQKYFQK+AKA+QNG+ G+V+MD++G
Sbjct: 165 ENTGRWTADEHRLFLQGLEEHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAKARQNGEEGDVSMDARGGT 235
BLAST of mRNA_H-canaliculatus_F_contig13106.2567.1 vs. uniprot
Match: B7GAW9_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GAW9_PHATC) HSP 1 Score: 121 bits (303), Expect = 5.640e-29 Identity = 55/71 (77.46%), Postives = 66/71 (92.96%), Query Frame = 1
Query: 10 QNTGRWTYDEHRLFLRGLDLHGKGWKKIASLIKTRTVVQIRTHAQKYFQKIAKAKQNGDHGEVAMDSKGNV 222
+NTGRWT +EHRLFL+GL+ HGKGWKKIASLIK+RTVVQIRTHAQKYFQK+AKA+QNG+ G+VAM+ +G V
Sbjct: 115 ENTGRWTAEEHRLFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAKARQNGEEGDVAMEGRGGV 185
BLAST of mRNA_H-canaliculatus_F_contig13106.2567.1 vs. uniprot
Match: A0A7S0GFF0_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GFF0_9STRA) HSP 1 Score: 121 bits (303), Expect = 6.140e-29 Identity = 55/72 (76.39%), Postives = 65/72 (90.28%), Query Frame = 1
Query: 7 SQNTGRWTYDEHRLFLRGLDLHGKGWKKIASLIKTRTVVQIRTHAQKYFQKIAKAKQNGDHGEVAMDSKGNV 222
S+NTGRWT DEHRLFL GL+LHGKGWKKIA LIK+RTVVQIRTHAQKYFQK+AKA+QNG+ G+V M+ +G +
Sbjct: 41 SENTGRWTADEHRLFLHGLELHGKGWKKIACLIKSRTVVQIRTHAQKYFQKLAKARQNGEEGDVPMEGRGGL 112
BLAST of mRNA_H-canaliculatus_F_contig13106.2567.1 vs. uniprot
Match: B7GAX0_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GAX0_PHATC) HSP 1 Score: 121 bits (303), Expect = 1.430e-28 Identity = 55/71 (77.46%), Postives = 66/71 (92.96%), Query Frame = 1
Query: 10 QNTGRWTYDEHRLFLRGLDLHGKGWKKIASLIKTRTVVQIRTHAQKYFQKIAKAKQNGDHGEVAMDSKGNV 222
+NTGRWT +EHRLFL+GL+ HGKGWKKIASLIK+RTVVQIRTHAQKYFQK+AKA+QNG+ G+VAM+ +G V
Sbjct: 115 ENTGRWTAEEHRLFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAKARQNGEEGDVAMEGRGGV 185
BLAST of mRNA_H-canaliculatus_F_contig13106.2567.1 vs. uniprot
Match: A0A6S8TU06_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A6S8TU06_9STRA) HSP 1 Score: 120 bits (300), Expect = 2.170e-28 Identity = 55/71 (77.46%), Postives = 66/71 (92.96%), Query Frame = 1
Query: 10 QNTGRWTYDEHRLFLRGLDLHGKGWKKIASLIKTRTVVQIRTHAQKYFQKIAKAKQNGDHGEVAMDSKGNV 222
+NTGRWT DEHRLFL+GL+ HGKGWKKIASLIK+RTVVQIRTHAQKYFQK+AKA+QNG+ GEV+M+++ V
Sbjct: 133 ENTGRWTADEHRLFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAKARQNGEEGEVSMENRERV 203 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13106.2567.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig13106.2567.1 >prot_H-canaliculatus_F_contig13106.2567.1 ID=prot_H-canaliculatus_F_contig13106.2567.1|Name=mRNA_H-canaliculatus_F_contig13106.2567.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=178bp PLSQNTGRWTYDEHRLFLRGLDLHGKGWKKIASLIKTRTVVQIRTHAQKYback to top mRNA from alignment at H-canaliculatus_F_contig13106:1088..3171- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig13106.2567.1 ID=mRNA_H-canaliculatus_F_contig13106.2567.1|Name=mRNA_H-canaliculatus_F_contig13106.2567.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2084bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13106:1088..3171- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig13106:1088..3171- >mRNA_H-canaliculatus_F_contig13106.2567.1 ID=mRNA_H-canaliculatus_F_contig13106.2567.1|Name=mRNA_H-canaliculatus_F_contig13106.2567.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1068bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13106:1088..3171- (Hapterophycus canaliculatus Oshoro5f female)back to top |