mRNA_H-canaliculatus_F_contig13093.2551.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig13093.2551.1 vs. uniprot
Match: D8LK78_ECTSI (Ubiquinol cytochrome c reductase subunit QCR7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK78_ECTSI) HSP 1 Score: 152 bits (383), Expect = 4.100e-46 Identity = 79/82 (96.34%), Postives = 82/82 (100.00%), Query Frame = 1
Query: 1 GLKFDDLMIEENPDVAEAVRRLTPEQQLARKRRQFRAFDISLKKTPLPDHIQAVQEPFEPYLQDIIKEVKEERLERELLNQR 246
GLKFDDLMIEE+PDVAEAVRRLTPEQQLARKRRQFRAFDISLKKTPLPDHIQAVQ+PFEPYLQDIIKEV+EERLERELLNQR
Sbjct: 32 GLKFDDLMIEEDPDVAEAVRRLTPEQQLARKRRQFRAFDISLKKTPLPDHIQAVQDPFEPYLQDIIKEVREERLERELLNQR 113
BLAST of mRNA_H-canaliculatus_F_contig13093.2551.1 vs. uniprot
Match: A0A7S2GXC5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GXC5_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 1.060e-15 Identity = 42/80 (52.50%), Postives = 54/80 (67.50%), Query Frame = 1
Query: 1 GLKFDDLMIEENPDVAEAVRRLTPEQQLARKRRQFRAFDISLKKTPLPDHIQAVQEPFEPYLQDIIKEVKEERLERELLN 240
GLK++D++ E PDV +AV RL P+ Q +R RR RA DIS KK PLP IQ P +PY+ ++ E +E RLERELLN
Sbjct: 30 GLKYNDILNEALPDVQKAVSRLDPDMQQSRDRRIKRALDISFKKKPLPMDIQKKLFPLDPYIDSLLDEARELRLERELLN 109
BLAST of mRNA_H-canaliculatus_F_contig13093.2551.1 vs. uniprot
Match: A0A7S3LNZ1_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LNZ1_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 7.750e-13 Identity = 37/79 (46.84%), Postives = 55/79 (69.62%), Query Frame = 1
Query: 1 GLKFDDLMIEENPDVAEAVRRLTPEQQLARKRRQFRAFDISLKKTPLPDHIQAVQEPFEPYLQDIIKEVKEERLERELL 237
GL+++D++I ENPDV A++ + PE+ AR RR RA D+S K LP HIQA+Q P + YL + ++E+++ R ERE L
Sbjct: 26 GLRYEDVIIYENPDVQRALKYIPPEEVEARNRRIRRALDLSFKHKELPKHIQAIQAPGKFYLDETMEEMRKLRKEREEL 104
BLAST of mRNA_H-canaliculatus_F_contig13093.2551.1 vs. uniprot
Match: A0A7S2WSF4_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WSF4_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 3.720e-12 Identity = 36/79 (45.57%), Postives = 55/79 (69.62%), Query Frame = 1
Query: 1 GLKFDDLMIEENPDVAEAVRRLTPEQQLARKRRQFRAFDISLKKTPLPDHIQAVQEPFEPYLQDIIKEVKEERLERELL 237
GL+++D+++ ENPDV A++ + E+Q+AR+RR RA D++ K LP I+AVQEP YLQ ++ + + R ERELL
Sbjct: 24 GLRYEDILMTENPDVKRALQYIPKEEQIARQRRIRRAIDLNFKHQYLPKEIEAVQEPGTVYLQPLMDKFRVLREERELL 102
BLAST of mRNA_H-canaliculatus_F_contig13093.2551.1 vs. uniprot
Match: A0A1X6NXZ7_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NXZ7_PORUM) HSP 1 Score: 65.1 bits (157), Expect = 1.070e-11 Identity = 33/77 (42.86%), Postives = 53/77 (68.83%), Query Frame = 1
Query: 1 GLKFDDLMIEENPDVAEAVRRLTPEQQLARKRRQFRAFDISLKKTPLPDHIQAVQEPFEPYLQDIIKEVKEERLERE 231
GL++DDL+ E +P+V + +R + PE+ R +R RA D+ LKKT LPD IQA Q+ + PY++ + +K+ +LER+
Sbjct: 41 GLRYDDLLNEYDPEVRKTIRTMPPEEAELRAKRLTRAIDVDLKKTQLPDPIQAKQDIWNPYIRSRLGALKQSQLERQ 117
BLAST of mRNA_H-canaliculatus_F_contig13093.2551.1 vs. uniprot
Match: A0A7S2TS46_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TS46_9EUKA) HSP 1 Score: 62.4 bits (150), Expect = 1.320e-10 Identity = 33/79 (41.77%), Postives = 53/79 (67.09%), Query Frame = 1
Query: 1 GLKFDDLMIEENPDVAEAVRRLTPEQQLARKRRQFRAFDISLKKTPLPDHIQAVQEPFEPYLQDIIKEVKEERLERELL 237
GL++DDL+IE +PDV A+ RL+P ++ R R RA D +K + +P+H+Q Q P YL I++ ++ERLE+++L
Sbjct: 46 GLRYDDLLIETDPDVITAISRLSPRERTLRTMRLKRALDCEIKHSYVPEHLQGKQGPHR-YLTPYIEQARKERLEKDIL 123
BLAST of mRNA_H-canaliculatus_F_contig13093.2551.1 vs. uniprot
Match: A0A2V3J0E6_9FLOR (Cytochrome b-c1 complex subunit 7-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0E6_9FLOR) HSP 1 Score: 61.2 bits (147), Expect = 3.130e-10 Identity = 31/80 (38.75%), Postives = 57/80 (71.25%), Query Frame = 1
Query: 1 GLKFDDLMIEENPDVAEAVRRLTPEQQLARKRRQFRAFDISLKKTPLPDHIQAVQEPFEPYLQDIIKEVKEERLERELLN 240
GL++DDL+ E + +V A+ +L+P++ R +R RA D+ +KKT LP+ IQA ++ + PYL+ I +K+++LER++++
Sbjct: 36 GLRYDDLLNEYDDEVKHAISKLSPQELELRNKRLKRAIDLDVKKTYLPEDIQAQEDIWNPYLRTRIAALKQKKLERQIVD 115
BLAST of mRNA_H-canaliculatus_F_contig13093.2551.1 vs. uniprot
Match: A0A059LHI6_9CHLO (Cytochrome b-c1 complex subunit 7 n=1 Tax=Helicosporidium sp. ATCC 50920 TaxID=1291522 RepID=A0A059LHI6_9CHLO) HSP 1 Score: 61.2 bits (147), Expect = 3.820e-10 Identity = 39/80 (48.75%), Postives = 52/80 (65.00%), Query Frame = 1
Query: 1 GLKFDDLMIEENP-DVAEAVRRLTPEQQLARKRRQFRAFDISLKKTPLPDHIQAVQEPFEPYLQDIIKEVKEERLERELL 237
GL+++DLM E+ +V EA+RRL + AR +R RA D+S+K LP +QAVQ PFE YLQ + V+ ER ERE L
Sbjct: 34 GLRYEDLMDHEHDLNVNEALRRLPQDVVDARNQRIKRALDLSMKHAELPKELQAVQTPFESYLQATLDVVRAERAEREAL 113
BLAST of mRNA_H-canaliculatus_F_contig13093.2551.1 vs. uniprot
Match: M2XVT8_GALSU (Ubiquinol-cytochrome c reductase subunit 7 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XVT8_GALSU) HSP 1 Score: 60.8 bits (146), Expect = 4.520e-10 Identity = 30/73 (41.10%), Postives = 50/73 (68.49%), Query Frame = 1
Query: 1 GLKFDDLMIEENPDVAEAVRRLTPEQQLARKRRQFRAFDISLKKTPLPDHIQAVQEPFEPYLQDIIKEVKEER 219
GL++DDL+ E++PDV +A+ L ++ R +R RAFD+S+KKT LP+ I ++ + PYL+ I+ ++ ER
Sbjct: 37 GLRYDDLLNEQDPDVKQAIEMLPEHEKQLRAKRFIRAFDLSMKKTQLPEEIAQKEDIWNPYLRSRIQLIRRER 109
BLAST of mRNA_H-canaliculatus_F_contig13093.2551.1 vs. uniprot
Match: A0A3M6TEI6_POCDA (Cytochrome b-c1 complex subunit 7 n=2 Tax=Pocilloporidae TaxID=46729 RepID=A0A3M6TEI6_POCDA) HSP 1 Score: 59.3 bits (142), Expect = 1.850e-9 Identity = 35/78 (44.87%), Postives = 51/78 (65.38%), Query Frame = 1
Query: 1 GLKFDDLMIEENPDVAEAVRRLTPEQQLARKRRQFRAFDISLKKTPLPDHIQAVQEPFEPYLQDIIKEVKEERLEREL 234
GL+ DL+ E++PDV EAV+RL+PE R+ R RA D+++K T LP E Y+Q +I +VK+ER+ERE+
Sbjct: 36 GLRRGDLLNEDDPDVKEAVKRLSPEDFNLRQFRIKRALDLTMKHTILPKEHWTTSEEDTMYIQPLIDQVKKERIEREM 113 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13093.2551.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig13093.2551.1 >prot_H-canaliculatus_F_contig13093.2551.1 ID=prot_H-canaliculatus_F_contig13093.2551.1|Name=mRNA_H-canaliculatus_F_contig13093.2551.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=76bp MIEENPDVAEAVRRLTPEQQLARKRRQFRAFDISLKKTPLPDHIQAVQEPback to top mRNA from alignment at H-canaliculatus_F_contig13093:1136..1721+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig13093.2551.1 ID=mRNA_H-canaliculatus_F_contig13093.2551.1|Name=mRNA_H-canaliculatus_F_contig13093.2551.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=586bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13093:1136..1721+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig13093:1136..1721+ >mRNA_H-canaliculatus_F_contig13093.2551.1 ID=mRNA_H-canaliculatus_F_contig13093.2551.1|Name=mRNA_H-canaliculatus_F_contig13093.2551.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=456bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13093:1136..1721+ (Hapterophycus canaliculatus Oshoro5f female)back to top |