prot_H-canaliculatus_F_contig1309.2547.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1309.2547.1
Unique Nameprot_H-canaliculatus_F_contig1309.2547.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length276
Homology
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1309.2547.1 vs. uniprot
Match: D7G3T2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3T2_ECTSI)

HSP 1 Score: 311 bits (798), Expect = 1.090e-103
Identity = 174/268 (64.93%), Postives = 205/268 (76.49%), Query Frame = 0 
Query:    2 RHQNEAAAELLSVALTSSGLENVLSGLTSRVNALESTNKAQQHQREALKQQAPDIEISKKHLCETSAIQSLSTKSPEKQLATMAEAIVNMGQNINQFYKDVKYREAVQQATDAAQDELMQMELDGLKREVSVKFTRQDGLDMRKMIASEMRGMREEMEQQFAGKLSTVHDEVSXXLSLVMDHMRAIQETTSTTHELLKYRIEEAFTDIQNASEDMDAKLRKITEMFGLSNDPTDNDTPSLPEMLRSISDLQKFFYDCRDGLDIQTVRS 269
            +HQ  AAAELL+VALTSSGLE+VLS LT RVN LES NKAQ+H+ E L  Q P+++IS KHLCETSA+Q+L+ KSPE+QL  M++AIV++GQ++NQFYKDVKYREAVQQATDAAQDELMQMELD L  EV +KFTR+D  DMR+MIA EMR                      XX S V DH+R IQETT  T+ELLKYRIEEAFTDIQ AS DMDAK+RKIT+MFGLS +P DN TPS PEMLR+I DL++    CRD +D QTVR+
Sbjct:    3 KHQQAAAAELLTVALTSSGLESVLSQLTDRVNDLESVNKAQKHRLETLAHQTPEVDISDKHLCETSALQNLAGKSPEQQLVAMSDAIVSIGQSVNQFYKDVKYREAVQQATDAAQDELMQMELDRLNGEVDIKFTRKDAQDMRRMIAKEMRAXXXXXXXXXXXXXXXXXXXXXXXXSRVTDHVRVIQETTGATNELLKYRIEEAFTDIQRASVDMDAKIRKITDMFGLSANPDDNGTPSFPEMLRNIGDLERLALGCRDDIDEQTVRA 270
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1309.2547.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G3T2_ECTSI1.090e-10364.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 32..52
NoneNo IPR availableCOILSCoilCoilcoord: 105..125
NoneNo IPR availableCOILSCoilCoilcoord: 202..222

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1309contigH-canaliculatus_F_contig1309:2438..11426 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1309.2547.1mRNA_H-canaliculatus_F_contig1309.2547.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1309 2438..11426 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1309.2547.1 ID=prot_H-canaliculatus_F_contig1309.2547.1|Name=mRNA_H-canaliculatus_F_contig1309.2547.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=276bp
MRHQNEAAAELLSVALTSSGLENVLSGLTSRVNALESTNKAQQHQREALK
QQAPDIEISKKHLCETSAIQSLSTKSPEKQLATMAEAIVNMGQNINQFYK
DVKYREAVQQATDAAQDELMQMELDGLKREVSVKFTRQDGLDMRKMIASE
MRGMREEMEQQFAGKLSTVHDEVSGQLSLVMDHMRAIQETTSTTHELLKY
RIEEAFTDIQNASEDMDAKLRKITEMFGLSNDPTDNDTPSLPEMLRSISD
LQKFFYDCRDGLDIQTVRSTYHKAS*
back to top