prot_H-canaliculatus_F_contig13073.2540.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig13073.2540.1
Unique Nameprot_H-canaliculatus_F_contig13073.2540.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length189
Homology
BLAST of mRNA_H-canaliculatus_F_contig13073.2540.1 vs. uniprot
Match: D7FI10_ECTSI (DNA polymerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FI10_ECTSI)

HSP 1 Score: 334 bits (856), Expect = 5.610e-103
Identity = 174/193 (90.16%), Postives = 178/193 (92.23%), Query Frame = 0
Query:    5 AYAGGLVLEPKKGLYDEYILLLDFNSLYPSLIQEYNLCFTTMDWATCDMSTPAQEG----------GAEAGPKLPALPADGMDIGVLPRVIKTLVERRAVVKKMLKKEKDPSRKQELDIRQKALKLTANSMYGCLGFSFSRFYAKPIAALVTAQGRESLQRTVDLSENQLGLEVIYGDTDSVMINTHSTDLKQ 187
            AYAGGLVLEPKKGLYDEYILLLDFNSLYPSLIQEYNLCFTTM+WA CDMSTPAQ G           A AGPKLP LPA+GMDIGVLPRVI+TLVERR+VVKKMLKKEKDPSRKQELDIRQKALKLTANSMYGCLGFSFSRFYAKPIAALVTAQGRESLQRTVDLSENQLGLEVIYGDTDSVMINTHSTDLKQ
Sbjct:  957 AYAGGLVLEPKKGLYDEYILLLDFNSLYPSLIQEYNLCFTTMNWAACDMSTPAQGGEDDMDEDDGAAASAGPKLPDLPAEGMDIGVLPRVIRTLVERRSVVKKMLKKEKDPSRKQELDIRQKALKLTANSMYGCLGFSFSRFYAKPIAALVTAQGRESLQRTVDLSENQLGLEVIYGDTDSVMINTHSTDLKQ 1149          
BLAST of mRNA_H-canaliculatus_F_contig13073.2540.1 vs. uniprot
Match: B8LEG9_THAPS (DNA polymerase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LEG9_THAPS)

HSP 1 Score: 257 bits (657), Expect = 2.010e-76
Identity = 130/185 (70.27%), Postives = 153/185 (82.70%), Query Frame = 0
Query:    3 KAAYAGGLVLEPKKGLYDEYILLLDFNSLYPSLIQEYNLCFTTMDWATCDMSTPAQEGGAEAGPKLPALPADGMDIGVLPRVIKTLVERRAVVKKMLKKEKDPSRKQELDIRQKALKLTANSMYGCLGFSFSRFYAKPIAALVTAQGRESLQRTVDLSENQLGLEVIYGDTDSVMINTHSTDLKQ 187
            KA Y+GGLVLEPKKGLYD +ILLLDFNSLYPSLIQEYNLCFTTM+W+  +     + G    G +LP LP +G+  GVLPRVIKTLV+RR  VKK LK EK+  +K+EL+IRQ+ALKLTANSMYGCLGFS SRFYA+PIAALVTA GRE+LQRTVDL++  +GLEVIYGDTDS+MINT  TD+ +
Sbjct:  498 KAKYSGGLVLEPKKGLYDSFILLLDFNSLYPSLIQEYNLCFTTMEWSKSNAPANVEGGEVPQGDQLPPLPDEGLKRGVLPRVIKTLVDRRRNVKKFLKTEKNAEKKEELNIRQQALKLTANSMYGCLGFSHSRFYAQPIAALVTAMGRETLQRTVDLAQTSIGLEVIYGDTDSIMINTRITDVNE 682          
BLAST of mRNA_H-canaliculatus_F_contig13073.2540.1 vs. uniprot
Match: A0A7S2L169_9STRA (DNA polymerase n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2L169_9STRA)

HSP 1 Score: 257 bits (656), Expect = 7.530e-76
Identity = 131/185 (70.81%), Postives = 155/185 (83.78%), Query Frame = 0
Query:    3 KAAYAGGLVLEPKKGLYDEYILLLDFNSLYPSLIQEYNLCFTTMDWATCDMSTPAQEGGAEAGPKLPALPADGMDIGVLPRVIKTLVERRAVVKKMLKKEKDPSRKQELDIRQKALKLTANSMYGCLGFSFSRFYAKPIAALVTAQGRESLQRTVDLSENQLGLEVIYGDTDSVMINTHSTDLKQ 187
            KA Y+GGLVLEPKKGLYD +ILLLDFNSLYPSLIQEYNLCFTTMDW+       A EG A  G +LP LP + +D GVLPRVIKTLV+RR  VK+++K EKD ++K+ELDIRQ ALKLTANSMYGCLGFS SRFYA+PIAAL+TA GRE+LQRTVDL++  +GL+VIYGDTDS+MINT  +D+ +
Sbjct:  911 KAKYSGGLVLEPKKGLYDSFILLLDFNSLYPSLIQEYNLCFTTMDWSKSVTPNNA-EGVAPQGDQLPPLPDESLDRGVLPRVIKTLVDRRRAVKRLVKTEKDQTKKEELDIRQLALKLTANSMYGCLGFSHSRFYAQPIAALITAMGRETLQRTVDLTQTTIGLDVIYGDTDSIMINTRISDVNE 1094          
BLAST of mRNA_H-canaliculatus_F_contig13073.2540.1 vs. uniprot
Match: A0A7S2FD72_9STRA (DNA-directed DNA polymerase (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FD72_9STRA)

HSP 1 Score: 239 bits (610), Expect = 4.980e-75
Identity = 128/189 (67.72%), Postives = 153/189 (80.95%), Query Frame = 0
Query:    1 RKKAAYAGGLVLEPKKGLYDEYILLLDFNSLYPSLIQEYNLCFTTMDWATCDM-STPAQEGGAEAG-PKLPALPADGMDIGVLPRVIKTLVERRAVVKKMLKKEKDPSRKQELDIRQKALKLTANSMYGCLGFSFSRFYAKPIAALVTAQGRESLQRTVDLSENQLGLEVIYGDTDSVMINTHSTDLKQ 187
            R K  YAGGLVLEPKKGLY+ YILLLDF SLYPS+IQEYN+CFTTM+WA     ST   E   EAG   LP  P +  D GV+P+VI+T++ RR  VK++LK+E D  +KQ+LDIRQKALKLTANS+YGCLGFS SRF+A+PIAALVTA+GR+ LQRTVDL+EN +GLEVIYGDTDS+MI+T  TDLK+
Sbjct:    9 RGKPQYAGGLVLEPKKGLYETYILLLDFMSLYPSIIQEYNICFTTMEWAKYKTKSTNPAEDEEEAGFDGLPPDPENIDDKGVVPKVIRTIINRRVQVKQLLKQETDVGKKQQLDIRQKALKLTANSLYGCLGFSSSRFHAQPIAALVTAKGRQILQRTVDLAENNMGLEVIYGDTDSIMIDTKCTDLKE 197          
BLAST of mRNA_H-canaliculatus_F_contig13073.2540.1 vs. uniprot
Match: K0T5T4_THAOC (DNA polymerase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T5T4_THAOC)

HSP 1 Score: 251 bits (641), Expect = 1.460e-74
Identity = 131/187 (70.05%), Postives = 155/187 (82.89%), Query Frame = 0
Query:    1 RKKAAYAGGLVLEPKKGLYDEYILLLDFNSLYPSLIQEYNLCFTTMDWATCDMSTPAQEGGAEAGPKLPALPADGMDIGVLPRVIKTLVERRAVVKKMLKKEKDPSRKQELDIRQKALKLTANSMYGCLGFSFSRFYAKPIAALVTAQGRESLQRTVDLSENQLGLEVIYGDTDSVMINTHSTDLKQ 187
            + K  YAGGLVL+PKKGLYD +ILLLDFNSLYPSLIQEYNLCFTTMDWA  D    A E GA+   +LP+LP + +D GVLPRVIK+LVERR  VKK +K EKD  +K+EL+IRQ ALKLTANSMYGCLGF  SRFYA+PIAALVTA GR++LQRTVD+++  +GL+VIYGDTDS+MINT  TDL++
Sbjct:  363 KSKKGYAGGLVLDPKKGLYDSFILLLDFNSLYPSLIQEYNLCFTTMDWAK-DKDI-ADEAGAQEN-QLPSLPDESLDRGVLPRVIKSLVERRRNVKKFMKSEKDADKKEELNIRQLALKLTANSMYGCLGFQNSRFYARPIAALVTAMGRQTLQRTVDITQTTIGLDVIYGDTDSIMINTRITDLEE 546          
BLAST of mRNA_H-canaliculatus_F_contig13073.2540.1 vs. uniprot
Match: A0A482T3C7_9ARCH (DNA polymerase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T3C7_9ARCH)

HSP 1 Score: 251 bits (641), Expect = 3.120e-74
Identity = 140/220 (63.64%), Postives = 157/220 (71.36%), Query Frame = 0
Query:    1 RKKAAYAGGLVLEPKKGLYDEYILLLDFNSLYPSLIQEYNLCFTTMDW-------------ATCDMSTPAQ--------------------EGGAEAGPKLPALPADGMDIGVLPRVIKTLVERRAVVKKMLKKEKDPSRKQELDIRQKALKLTANSMYGCLGFSFSRFYAKPIAALVTAQGRESLQRTVDLSENQLGLEVIYGDTDSVMINTHSTDLKQ 187
            R KAAYAGGLVLEPKKGLYD YILLLDFNSLYPS+IQEYNLCFTT+DW             A  +   PA+                    EG    G  LP LP      GVLPRVIKTLV+RR  VK +LK E+DP ++Q LDIRQKALKLTANSMYGCLGFSFSRFYA+PIAALVTA GRE+LQRTVDL+ +Q+GL+VIYGDTDSVMINT+  DL+Q
Sbjct:  721 RAKAAYAGGLVLEPKKGLYDTYILLLDFNSLYPSIIQEYNLCFTTVDWTKYMPKEGALANDARGNAKGPAKGKTAKTEDEEEEVEGSDDEAEGDGGTGNNLPPLPESSSTPGVLPRVIKTLVDRRRQVKNLLKNERDPVQRQLLDIRQKALKLTANSMYGCLGFSFSRFYARPIAALVTAMGREALQRTVDLATHQMGLDVIYGDTDSVMINTNLVDLQQ 940          
BLAST of mRNA_H-canaliculatus_F_contig13073.2540.1 vs. uniprot
Match: A0A4D9CVK1_9STRA (DNA polymerase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVK1_9STRA)

HSP 1 Score: 248 bits (634), Expect = 6.960e-73
Identity = 132/201 (65.67%), Postives = 157/201 (78.11%), Query Frame = 0
Query:    1 RKKAAYAGGLVLEPKKGLYDEYILLLDFNSLYPSLIQEYNLCFTTMDWATC--------------------DMSTPAQEGGAEAG-PKLPALPADGMDIGVLPRVIKTLVERRAVVKKMLKKEKDPSRKQELDIRQKALKLTANSMYGCLGFSFSRFYAKPIAALVTAQGRESLQRTVDLSENQLGLEVIYGDTDSVMINT 180
            R+K AYAGGLVLEPKKGLYD YILLLDFNSLYPS+IQEYNLCFTT++W+                      D+   A E  A AG  +LP LP   +D G+LPRVIKTLV+RR+ VKK+LK E+D ++K++LDIRQKALKLTANSMYGCLGFS SRF+A+PIAALVTA GRE+LQRTVD+++NQL L+VIYGDTDS+MINT
Sbjct:  942 RQKPAYAGGLVLEPKKGLYDSYILLLDFNSLYPSIIQEYNLCFTTINWSAFARPSSTAGGDPLAKTAGDEDDVGLGADEDEAAAGGAQLPPLPDTALDQGILPRVIKTLVDRRSSVKKLLKAERDAAKKEQLDIRQKALKLTANSMYGCLGFSHSRFFARPIAALVTAMGRETLQRTVDVAQNQLSLDVIYGDTDSIMINT 1142          
BLAST of mRNA_H-canaliculatus_F_contig13073.2540.1 vs. uniprot
Match: A0A7S4IIV6_9STRA (DNA polymerase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IIV6_9STRA)

HSP 1 Score: 247 bits (630), Expect = 2.340e-72
Identity = 132/204 (64.71%), Postives = 154/204 (75.49%), Query Frame = 0
Query:    1 RKKAAYAGGLVLEPKKGLYDEYILLLDFNSLYPSLIQEYNLCFTTMD-WATCD---MSTPAQEGGA--------------------EAGPKLPALPADGMDIGVLPRVIKTLVERRAVVKKMLKKEKDPSRKQELDIRQKALKLTANSMYGCLGFSFSRFYAKPIAALVTAQGRESLQRTVDLSENQLGLEVIYGDTDSVMINT 180
            R KA Y+GGLVLEPKKGLYD YILLLDFNSLYPS+IQEYNLCFTT+D W+      ++    +GG                      AG  LP++P    D+GVLPRVI+TLVERR  VKK+LK E+D  +K+ELDIRQKALKLTANSMYGCLGFSFSRFYA+PIAALVTA GRE+LQ+TVD++E  +GL+VIYGDTDSVMINT
Sbjct:  771 RAKAKYSGGLVLEPKKGLYDSYILLLDFNSLYPSIIQEYNLCFTTLDDWSGLQAKALAASTPKGGTPSGXXXXXXXXXXXXVALIENAGDALPSIPDPSKDVGVLPRVIRTLVERRKAVKKLLKNERDADKKEELDIRQKALKLTANSMYGCLGFSFSRFYAQPIAALVTAMGRETLQKTVDIAEKSVGLDVIYGDTDSVMINT 974          
BLAST of mRNA_H-canaliculatus_F_contig13073.2540.1 vs. uniprot
Match: B7S420_PHATC (DNA polymerase (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7S420_PHATC)

HSP 1 Score: 239 bits (609), Expect = 9.340e-70
Identity = 127/182 (69.78%), Postives = 145/182 (79.67%), Query Frame = 0
Query:    3 KAAYAGGLVLEPKKGLYDEYILLLDFNSLYPSLIQEYNLCFTTMDWATCDMSTPAQEGGAEAGPKLPALPADGMDIGVLPRVIKTLVERRAVVKKMLKKEKDPSRKQELDIRQKALKLTANSMYGCLGFSFSRFYAKPIAALVTAQGRESLQRTVDLSENQLGLEVIYGDTDSVMINTHSTD 184
            KA YAGGLVLEPKKGLYD YILLLDFNSLYPS+IQEYNLCFTT+DWA           G E    LP LP    D GVLPRVI++LVERR  VKK+LK E +  RK+ELDIRQKALKLTANSMYGCLGFS SRF+A+PIAAL+T+ GRE LQRTVD+++ ++GL+VIYGDTDS+MINT   D
Sbjct:  502 KAKYAGGLVLEPKKGLYDSYILLLDFNSLYPSIIQEYNLCFTTLDWAGL--------AGTEDN-VLPDLPDTEADRGVLPRVIQSLVERRRTVKKLLKSETNAVRKEELDIRQKALKLTANSMYGCLGFSNSRFFAQPIAALITSMGREILQRTVDIAQQKVGLDVIYGDTDSIMINTRIND 674          
BLAST of mRNA_H-canaliculatus_F_contig13073.2540.1 vs. uniprot
Match: A0A7S1UP17_9STRA (DNA polymerase (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UP17_9STRA)

HSP 1 Score: 234 bits (596), Expect = 1.970e-69
Identity = 122/183 (66.67%), Postives = 146/183 (79.78%), Query Frame = 0
Query:    3 KAAYAGGLVLEPKKGLYDEYILLLDFNSLYPSLIQEYNLCFTTMD-WATCDMSTPAQEGGAEAGPKLPALPADGMDIGVLPRVIKTLVERRAVVKKMLKKEKDPSRKQELDIRQKALKLTANSMYGCLGFSFSRFYAKPIAALVTAQGRESLQRTVDLSENQLGLEVIYGDTDSVMINTHSTD 184
            KA Y+GGLVLEPKKG YD +ILLLDFNSLYPS+IQEYNLCFTTMD WA  D +            +LP LP +  + GVLPRVIK+LV+RR VVK++LK E +  ++Q LDIRQKALKLTANSMYGCLGFS SRFYA+PIAALVTA GRE+LQ++VD+++  +GL VIYGDTDS+MI+T  TD
Sbjct:  511 KAKYSGGLVLEPKKGYYDSFILLLDFNSLYPSIIQEYNLCFTTMDDWA--DHANNNAXXXXXXSSELPELPEESKERGVLPRVIKSLVDRRRVVKRLLKNETNDDKRQNLDIRQKALKLTANSMYGCLGFSHSRFYAQPIAALVTAMGRETLQKSVDIAQESVGLSVIYGDTDSIMIDTRITD 691          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13073.2540.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FI10_ECTSI5.610e-10390.16DNA polymerase n=2 Tax=Ectocarpus TaxID=2879 RepID... [more]
B8LEG9_THAPS2.010e-7670.27DNA polymerase (Fragment) n=1 Tax=Thalassiosira ps... [more]
A0A7S2L169_9STRA7.530e-7670.81DNA polymerase n=1 Tax=Skeletonema marinoi TaxID=2... [more]
A0A7S2FD72_9STRA4.980e-7567.72DNA-directed DNA polymerase (Fragment) n=1 Tax=Dic... [more]
K0T5T4_THAOC1.460e-7470.05DNA polymerase n=1 Tax=Thalassiosira oceanica TaxI... [more]
A0A482T3C7_9ARCH3.120e-7463.64DNA polymerase n=1 Tax=archaeon TaxID=1906665 RepI... [more]
A0A4D9CVK1_9STRA6.960e-7365.67DNA polymerase n=1 Tax=Nannochloropsis salina CCMP... [more]
A0A7S4IIV6_9STRA2.340e-7264.71DNA polymerase n=1 Tax=Odontella aurita TaxID=2655... [more]
B7S420_PHATC9.340e-7069.78DNA polymerase (Fragment) n=1 Tax=Phaeodactylum tr... [more]
A0A7S1UP17_9STRA1.970e-6966.67DNA polymerase (Fragment) n=1 Tax=Grammatophora oc... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006172DNA-directed DNA polymerase, family BPRINTSPR00106DNAPOLBcoord: 168..176
score: 76.12
coord: 115..127
score: 56.49
coord: 23..36
score: 55.86
IPR023211DNA polymerase, palm domain superfamilyGENE3D3.90.1600.10coord: 5..187
e-value: 1.2E-68
score: 232.8
NoneNo IPR availableTIGRFAMTIGR00592TIGR00592coord: 2..187
e-value: 2.8E-85
score: 285.2
NoneNo IPR availableGENE3D1.10.287.690coord: 79..131
e-value: 1.2E-68
score: 232.8
NoneNo IPR availablePANTHERPTHR45861FAMILY NOT NAMEDcoord: 1..188
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 2..186
IPR006134DNA-directed DNA polymerase, family B, multifunctional domainPFAMPF00136DNA_pol_Bcoord: 4..187
e-value: 1.6E-63
score: 215.1
IPR017964DNA-directed DNA polymerase, family B, conserved sitePROSITEPS00116DNA_POLYMERASE_Bcoord: 170..178

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig13073contigH-canaliculatus_F_contig13073:464..2752 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig13073.2540.1mRNA_H-canaliculatus_F_contig13073.2540.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig13073 464..2752 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig13073.2540.1 ID=prot_H-canaliculatus_F_contig13073.2540.1|Name=mRNA_H-canaliculatus_F_contig13073.2540.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=189bp
RKKAAYAGGLVLEPKKGLYDEYILLLDFNSLYPSLIQEYNLCFTTMDWAT
CDMSTPAQEGGAEAGPKLPALPADGMDIGVLPRVIKTLVERRAVVKKMLK
KEKDPSRKQELDIRQKALKLTANSMYGCLGFSFSRFYAKPIAALVTAQGR
ESLQRTVDLSENQLGLEVIYGDTDSVMINTHSTDLKQA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017964DNA-dir_DNA_pol_B_CS
IPR006134DNA-dir_DNA_pol_B_multi_dom
IPR023211DNA_pol_palm_dom_sf
IPR006172DNA-dir_DNA_pol_B