prot_H-canaliculatus_F_contig13004.2499.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig13004.2499.1
Unique Nameprot_H-canaliculatus_F_contig13004.2499.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length99
Homology
BLAST of mRNA_H-canaliculatus_F_contig13004.2499.1 vs. uniprot
Match: A0A6H5KXQ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXQ0_9PHAE)

HSP 1 Score: 162 bits (411), Expect = 1.720e-44
Identity = 78/86 (90.70%), Postives = 83/86 (96.51%), Query Frame = 0
Query:   13 AQKVLQKSQQMARNEHTLDYDERNPFEVDCQALKPIYRGSPSCKCPYCASSYQPSAKGSVCVTCGLSQVGVETLGLVTTSSAGGKR 98
            AQKVLQKSQQMARNEHTLDYDERNPFEVDCQ+LKPIYRG+PSCKCPYC S+Y  SAKG+VCVTCGLSQ+GVETLGLVTTSSAGGKR
Sbjct:  807 AQKVLQKSQQMARNEHTLDYDERNPFEVDCQSLKPIYRGTPSCKCPYCGSAYPLSAKGTVCVTCGLSQIGVETLGLVTTSSAGGKR 892          
BLAST of mRNA_H-canaliculatus_F_contig13004.2499.1 vs. uniprot
Match: D8LL95_ECTSI (Coatomer subunit alpha n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL95_ECTSI)

HSP 1 Score: 162 bits (409), Expect = 3.630e-44
Identity = 78/86 (90.70%), Postives = 82/86 (95.35%), Query Frame = 0
Query:   13 AQKVLQKSQQMARNEHTLDYDERNPFEVDCQALKPIYRGSPSCKCPYCASSYQPSAKGSVCVTCGLSQVGVETLGLVTTSSAGGKR 98
            AQKVLQKSQQMARNEHTLDYDERNPFEVDCQ+LKPIYRG+PSCKCPYC S+Y  SAKG VCVTCGLSQ+GVETLGLVTTSSAGGKR
Sbjct: 1173 AQKVLQKSQQMARNEHTLDYDERNPFEVDCQSLKPIYRGTPSCKCPYCGSAYPLSAKGMVCVTCGLSQIGVETLGLVTTSSAGGKR 1258          
BLAST of mRNA_H-canaliculatus_F_contig13004.2499.1 vs. uniprot
Match: A0A835Z8J6_9STRA (Coatomer subunit alpha n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8J6_9STRA)

HSP 1 Score: 128 bits (322), Expect = 1.970e-32
Identity = 62/90 (68.89%), Postives = 75/90 (83.33%), Query Frame = 0
Query:    5 RPARSKSQAQKVLQKSQQMARNEHTLDYDERNPFEVDCQALKPIYRGSPSCKCPYCASSYQPSAKGSVCVTCGLSQVGVETLGLVTTSSA 94
            R A  + +AQK+LQKSQQMARNE  LDYDERNPF +DC  LKPIYRG+P  KCPYC+SSY P++  +VC TCG+SQVGVETLGLVTT+++
Sbjct: 1137 RNAELRDKAQKILQKSQQMARNEVDLDYDERNPFVIDCATLKPIYRGAPVVKCPYCSSSYSPASDKTVCQTCGISQVGVETLGLVTTTAS 1226          
BLAST of mRNA_H-canaliculatus_F_contig13004.2499.1 vs. uniprot
Match: A0A7S3YID5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YID5_HETAK)

HSP 1 Score: 112 bits (280), Expect = 1.100e-28
Identity = 54/85 (63.53%), Postives = 63/85 (74.12%), Query Frame = 0
Query:   10 KSQAQKVLQKSQQMARNEHTLDYDERNPFEVDCQALKPIYRGSPSCKCPYCASSYQPSAKGSVCVTCGLSQVGVETLGLVTTSSA 94
            K +AQKVLQKS+QM  NEH LDYDERNPF VD   L PIYRGSP   CP+CAS YQP     +C TC +SQ+GVET+GLV+  +A
Sbjct:  153 KLKAQKVLQKSEQMGSNEHALDYDERNPFAVDAADLVPIYRGSPEVTCPFCASHYQPRHANGLCATCNISQIGVETIGLVSQVAA 237          
BLAST of mRNA_H-canaliculatus_F_contig13004.2499.1 vs. uniprot
Match: W7TRK7_9STRA (Coatomer subunit alpha n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TRK7_9STRA)

HSP 1 Score: 117 bits (294), Expect = 1.180e-28
Identity = 54/83 (65.06%), Postives = 68/83 (81.93%), Query Frame = 0
Query:   13 AQKVLQKSQQMARNEHTLDYDERNPFEVDCQALKPIYRGSPSCKCPYCASSYQPSAKGSVCVTCGLSQVGVETLGLVTTSSAG 95
            AQKVLQKS+QMARNEH ++YD+R  F +DC+ L PI RG+P  KC YC SSY P +KG +CVTCG+SQVG+ETLGLVT++ +G
Sbjct: 1188 AQKVLQKSEQMARNEHAIEYDDRQAFVIDCRTLLPIPRGAPCLKCSYCGSSYTPESKGVLCVTCGISQVGLETLGLVTSAGSG 1270          
BLAST of mRNA_H-canaliculatus_F_contig13004.2499.1 vs. uniprot
Match: A0A7S2FV00_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FV00_9STRA)

HSP 1 Score: 113 bits (282), Expect = 2.280e-28
Identity = 51/85 (60.00%), Postives = 64/85 (75.29%), Query Frame = 0
Query:   10 KSQAQKVLQKSQQMARNEHTLDYDERNPFEVDCQALKPIYRGSPSCKCPYCASSYQPSAKGSVCVTCGLSQVGVETLGLVTTSSA 94
            K +AQKV+ KS++  RNEHTL YDERNPF++DCQA  P+YRGSP  KC YC S+YQP     +C TCG++ +GVETLGL T  S+
Sbjct:  221 KGKAQKVILKSEKEGRNEHTLQYDERNPFDIDCQAFVPVYRGSPVVKCAYCGSAYQPECTNKLCTTCGIALIGVETLGLPTGRSS 305          
BLAST of mRNA_H-canaliculatus_F_contig13004.2499.1 vs. uniprot
Match: A0A7S3GXR2_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GXR2_9STRA)

HSP 1 Score: 114 bits (284), Expect = 1.370e-27
Identity = 52/87 (59.77%), Postives = 69/87 (79.31%), Query Frame = 0
Query:    7 ARSKSQAQKVLQKSQQMARNEHTLDYDERNPFEVDCQALKPIYRGSPSCKCPYCASSYQPSAKGSVCVTCGLSQVGVETLGLVTTSS 93
            A S+S+AQKVLQKS+Q  RNE+T+DYDERNPF +DC  LKP+Y+G+P  KC YCA+ Y    KG +C+ CG+S VG++T+GLVT S+
Sbjct:  410 ADSRSKAQKVLQKSEQQGRNEYTIDYDERNPFSLDCSTLKPLYKGTPLVKCSYCAACYAVDYKGKLCLICGISTVGLDTVGLVTQSA 496          
BLAST of mRNA_H-canaliculatus_F_contig13004.2499.1 vs. uniprot
Match: A0A7S3GXJ7_9STRA (Coatomer subunit alpha n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GXJ7_9STRA)

HSP 1 Score: 114 bits (284), Expect = 2.640e-27
Identity = 52/87 (59.77%), Postives = 69/87 (79.31%), Query Frame = 0
Query:    7 ARSKSQAQKVLQKSQQMARNEHTLDYDERNPFEVDCQALKPIYRGSPSCKCPYCASSYQPSAKGSVCVTCGLSQVGVETLGLVTTSS 93
            A S+S+AQKVLQKS+Q  RNE+T+DYDERNPF +DC  LKP+Y+G+P  KC YCA+ Y    KG +C+ CG+S VG++T+GLVT S+
Sbjct: 1167 ADSRSKAQKVLQKSEQQGRNEYTIDYDERNPFSLDCSTLKPLYKGTPLVKCSYCAACYAVDYKGKLCLICGISTVGLDTVGLVTQSA 1253          
BLAST of mRNA_H-canaliculatus_F_contig13004.2499.1 vs. uniprot
Match: F0YGR3_AURAN (Coatomer subunit alpha n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YGR3_AURAN)

HSP 1 Score: 111 bits (277), Expect = 2.330e-26
Identity = 51/83 (61.45%), Postives = 66/83 (79.52%), Query Frame = 0
Query:   10 KSQAQKVLQKSQQMARNEHTLDYDERNPFEVDCQALKPIYRGSPSCKCPYCASSYQPSAKGSVCVTCGLSQVGVETLGLVTTS 92
            +S+AQ V++ S+Q ARNEH L+YDERNPF+++C  L+PIYRGSPS  CPYC S +    KGS+CVTC L+ +GVETLGLV+ S
Sbjct: 1136 RSRAQLVIRNSEQKARNEHALNYDERNPFDIECTDLQPIYRGSPSASCPYCRSVHSTKMKGSLCVTCNLAVIGVETLGLVSQS 1218          
BLAST of mRNA_H-canaliculatus_F_contig13004.2499.1 vs. uniprot
Match: A0A7S2RES0_9STRA (Coatomer subunit alpha n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RES0_9STRA)

HSP 1 Score: 107 bits (268), Expect = 3.820e-25
Identity = 52/83 (62.65%), Postives = 61/83 (73.49%), Query Frame = 0
Query:   10 KSQAQKVLQKSQQMARNEHTLDYDERNPFEVDCQALKPIYRGSPSCKCPYCASSYQPSAKGSVCVTCGLSQVGVETLGLVTTS 92
            K +AQKV+ KS+QMARNEH L YDERNPF++D     PIYRGSP  +C YC ++Y P  K  VC  CGLS VGVET+GLVT S
Sbjct: 1170 KVKAQKVVLKSEQMARNEHQLHYDERNPFDIDSDTFLPIYRGSPVVRCAYCNAAYSPDMKNKVCRACGLSLVGVETIGLVTAS 1252          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13004.2499.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KXQ0_9PHAE1.720e-4490.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LL95_ECTSI3.630e-4490.70Coatomer subunit alpha n=1 Tax=Ectocarpus siliculo... [more]
A0A835Z8J6_9STRA1.970e-3268.89Coatomer subunit alpha n=1 Tax=Tribonema minus Tax... [more]
A0A7S3YID5_HETAK1.100e-2863.53Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
W7TRK7_9STRA1.180e-2865.06Coatomer subunit alpha n=2 Tax=Monodopsidaceae Tax... [more]
A0A7S2FV00_9STRA2.280e-2860.00Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S3GXR2_9STRA1.370e-2759.77Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S3GXJ7_9STRA2.640e-2759.77Coatomer subunit alpha n=1 Tax=Spumella elongata T... [more]
F0YGR3_AURAN2.330e-2661.45Coatomer subunit alpha n=1 Tax=Aureococcus anophag... [more]
A0A7S2RES0_9STRA3.820e-2562.65Coatomer subunit alpha n=1 Tax=Rhizochromulina mar... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010714Coatomer, alpha subunit, C-terminalPFAMPF06957COPI_Ccoord: 8..91
e-value: 2.7E-29
score: 102.1
NoneNo IPR availablePANTHERPTHR19876COATOMERcoord: 10..87
NoneNo IPR availablePANTHERPTHR19876:SF1COATOMER SUBUNIT ALPHAcoord: 10..87

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig13004contigH-canaliculatus_F_contig13004:2915..3211 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig13004.2499.1mRNA_H-canaliculatus_F_contig13004.2499.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig13004 2915..3211 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig13004.2499.1 ID=prot_H-canaliculatus_F_contig13004.2499.1|Name=mRNA_H-canaliculatus_F_contig13004.2499.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=99bp
SSAPRPARSKSQAQKVLQKSQQMARNEHTLDYDERNPFEVDCQALKPIYR
GSPSCKCPYCASSYQPSAKGSVCVTCGLSQVGVETLGLVTTSSAGGKR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010714Coatomer_asu_C