mRNA_H-canaliculatus_F_contig130.2492.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig130.2492.1
Unique NamemRNA_H-canaliculatus_F_contig130.2492.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig130.2492.1 vs. uniprot
Match: D7G3T3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3T3_ECTSI)

HSP 1 Score: 248 bits (634), Expect = 4.860e-70
Identity = 196/457 (42.89%), Postives = 240/457 (52.52%), Query Frame = 1
Query:  337 LEVGRVHVGLIAGRRIARRGRGGMTELFGLVSAPPASPYCKITLGDSELSSGVGVRTTAGYAWNREQMAFPVKVQEMAVLRDPGKATHTEYQESEGGTTRGEKGEDGPSPSS-----PTRGG-GKAGGVACGSSISRAXXXXXXXXXAHEVSRRLTLKVQVFHR---------VDDGRTRPEAGXXXXXXXVVVSKGPGVQIGTAADSPATNNAASRSGGTVGTGGATDGSDGDSXXXXXXXXXXNEDLLIGECSLDLVELVCGRAPHVEEWLPLDSEGDLRLSLDYDSVGGVVPVPGDPVVLLCLSNRLDFFPLPVWDGDDAEDLPRPGAPSWLWPGGGRAWLRRSSGGGGEGFRVEEAGDDFFLISYPTPEGWRCAVEVHRFLVHPDHTAPRRWTLSGVRDHAAATPAAAAVREAVLSASQEESILEGGKGLAIAAFEGVMWTAARWRAGGLGRA 1662
            L VG +HVGLIA R + R  +GG++++ GL  +P ASPYC+ TLG+ E +SGVGVRTT G++WNREQ+ FPVKV    V+   G++ HT    S+G +T    G  GP  ++     P  GG G +G VAC SS+SRA         AH V  +L+L+ QVFHR         V  G T     X      V   K   + +G    + AT+NA +         G T    G++XXXXXXXXXX  D L+GECSL+LVE+V GRAPHVEEW+PLDSEG+LRLSLDYDSV  + PVPGD V                                                                                     +PD TAP+RWTLSGVRDHAAATPAAAA+R AVL ASQEES  EGGK LA+   EGV WTA RW +GGL RA
Sbjct:    2 LGVGSLHVGLIAARDVKRVKQGGVSDMLGL--SPQASPYCRFTLGEYEFTSGVGVRTTGGHSWNREQIYFPVKVPISCVVGGSGQSYHTAGSGSDGSSTNTRGGTKGPRKAATPVGQPKSGGEGGSGSVACRSSLSRAVANADAAA-AHCVWNQLSLRAQVFHREGGDGYGAGVGSGTTAXXXXXVKGPGGVAAKKATTMAVGITTSTTATSNAKALKDTPEDPAGTTL-MGGNTXXXXXXXXXXXNDRLLGECSLNLVEVVSGRAPHVEEWVPLDSEGELRLSLDYDSVREL-PVPGDSV-------------------------------------------------------------------------------------YPDPTAPQRWTLSGVRDHAAATPAAAAIRGAVLRASQEESAWEGGKTLALNVLEGVSWTAKRWWSGGLDRA 368          
BLAST of mRNA_H-canaliculatus_F_contig130.2492.1 vs. uniprot
Match: A0A6H5KRG9_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRG9_9PHAE)

HSP 1 Score: 134 bits (337), Expect = 4.050e-32
Identity = 82/168 (48.81%), Postives = 108/168 (64.29%), Query Frame = 1
Query:  325 VEETLEVGRVHVGLIAGRRIARRGRGGMTELFGLVSAPPASPYCKITLGDSELSSGVGVRTTAGYAWNREQMAFPVKVQEMAVLRDPGKATHTEYQESEGGTTRGEKGEDGP----SPSSPTRGGGK--AGGVACGSSISRAXXXXXXXXXAHEVSRRLTLKVQVFHR 810
            VE+ LEVG +HVGLIA R + R  +GG++++ GL  +P ASPYC+ TLG+ E +SGVGVRTT G++WNREQ+ FPVKV    V+   G++ HT    S+G +T   KG  GP    +P    + GGK  +G VACGSS+SRA         AH V   L+L+ QVFHR
Sbjct:    6 VEDMLEVGSLHVGLIAARDVKRVKQGGVSDMLGL--SPQASPYCRFTLGEYEFTSGVGVRTTGGHSWNREQIFFPVKVPISCVIGGSGQSYHTAGSGSDGSSTNRRKGTKGPRKAATPGGQPKSGGKGGSGSVACGSSLSRAVAADAAA--AHGVWNHLSLRAQVFHR 169          
BLAST of mRNA_H-canaliculatus_F_contig130.2492.1 vs. uniprot
Match: A0A6H5KDQ7_9PHAE (U-box domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDQ7_9PHAE)

HSP 1 Score: 128 bits (321), Expect = 4.200e-31
Identity = 61/75 (81.33%), Postives = 63/75 (84.00%), Query Frame = 1
Query: 2074 FTPDQEQRE----HLCPITRCPMEDPAVACDGITYERAAIERWLSEHDTSPVTGKILETKVVFKNWSLVSSSSSP 2286
            F P Q+Q +    HLCPITRCPMEDPAVA DG TYER AIERWLSEHDTSPVTGK LETKVVFKNWSLVSSS SP
Sbjct:   30 FAPQQQQHQXQHQHLCPITRCPMEDPAVAADGYTYERTAIERWLSEHDTSPVTGKALETKVVFKNWSLVSSSPSP 104          
BLAST of mRNA_H-canaliculatus_F_contig130.2492.1 vs. uniprot
Match: D7G3T4_ECTSI (Protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3T4_ECTSI)

HSP 1 Score: 98.2 bits (243), Expect = 3.200e-21
Identity = 47/53 (88.68%), Postives = 47/53 (88.68%), Query Frame = 1
Query: 2128 MEDPAVACDGITYERAAIERWLSEHDTSPVTGKILETKVVFKNWSLVSSSSSP 2286
            MEDPAVA DG TYER AIE WLSEHDTSPVTGK LETKVVFKNWSLVSSS SP
Sbjct:    1 MEDPAVAADGYTYERTAIECWLSEHDTSPVTGKALETKVVFKNWSLVSSSPSP 53          
BLAST of mRNA_H-canaliculatus_F_contig130.2492.1 vs. uniprot
Match: A0A7S1UIP8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UIP8_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 7.070e-17
Identity = 72/229 (31.44%), Postives = 104/229 (45.41%), Query Frame = 1
Query: 1030 EDLLIGECSLDLVELVCGRAPHVEEWLPLDSEGDLRLSLDYDSVGGVVPVP--GDPVVLLCLSNRLD--FFPLPVWDGDDAEDLPRPGAPSWLWPGGGRAWLRRSSGGGGEGFRVEEAGDDFFLISYPTPEGWRCAVEVHRFLVHPDHTAPRRW--TLSGVRDHAAATPAAAAVREAVLSASQEESILEGGKGLAIAAFEGVMWTAARWRAGGLGRARDDVCFALDLTD 1698
            E +++G   LD+V L+ GR  H++EWL L   G + +++D+D     +P+P  GD V  + L  RLD   FP+P                + LW                    V+E G D   +S+ T EGW+C VEVHRFL+ P  T   R    + G       +P    V +AVL+  ++     GG       + GV+  A RWR GG   ARDD+ + L   D
Sbjct:   49 EAVVLGAVELDVVNLLTGRVNHMDEWLDLGDGGSIHVAVDFDMT---MPLPQVGDGV--MPLPYRLDARLFPVP--------------RSTTLW--------------------VDETGCDHVKVSWETTEGWKCVVEVHRFLLVPLPTEKGRIMANIEGAAQALYHSPIVNTVTDAVLAIPEDGVTRVGGM-----LWGGVVDYAGRWRQGGFAAARDDLAWGLGFAD 233          
BLAST of mRNA_H-canaliculatus_F_contig130.2492.1 vs. uniprot
Match: A0A7S1UFM5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UFM5_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 8.320e-13
Identity = 33/57 (57.89%), Postives = 45/57 (78.95%), Query Frame = 1
Query: 2107 CPITRCPMEDPAVACDGITYERAAIERWLSEHDTSPVTGKILETKVVFKNWSLVSSS 2277
            CPIT  PM +P VA DG TYER+A+ERWL +HDTSP+TG++L TK +F N +L +++
Sbjct:   37 CPITGAPMCEPVVAADGHTYERSAMERWLRDHDTSPLTGEVLPTKALFPNRTLAATN 93          
BLAST of mRNA_H-canaliculatus_F_contig130.2492.1 vs. uniprot
Match: A0A7R9UF69_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UF69_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 8.560e-13
Identity = 34/53 (64.15%), Postives = 41/53 (77.36%), Query Frame = 1
Query: 2107 CPITRCPMEDPAVACDGITYERAAIERWLSEHDTSPVTGKILETKVVFKNWSL 2265
            CPIT  PM DP VA DG TYER AI RW SEHDTSP+TG++L TK +F N+++
Sbjct:   79 CPITGAPMCDPVVAADGHTYERTAILRWFSEHDTSPLTGEVLVTKALFPNFAI 131          
BLAST of mRNA_H-canaliculatus_F_contig130.2492.1 vs. uniprot
Match: A0A7J6LA49_PEROL (U-box domain-containing protein n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6LA49_PEROL)

HSP 1 Score: 73.9 bits (180), Expect = 1.810e-11
Identity = 31/48 (64.58%), Postives = 38/48 (79.17%), Query Frame = 1
Query: 2104 LCPITRCPMEDPAVACDGITYERAAIERWLSEHDTSPVTGKILETKVV 2247
            +CPITR PM  PAVACDG TYER AIERWL+ +D SP+TG  + T++V
Sbjct:  102 MCPITRAPMRSPAVACDGHTYERGAIERWLAGNDKSPITGSRMMTRLV 149          
BLAST of mRNA_H-canaliculatus_F_contig130.2492.1 vs. uniprot
Match: A0A7S2FZS1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FZS1_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 3.690e-11
Identity = 31/54 (57.41%), Postives = 42/54 (77.78%), Query Frame = 1
Query: 2104 LCPITRCPMEDPAVACDGITYERAAIERWLSEHDTSPVTGKILETKVVFKNWSL 2265
            +CPIT+  + DP VA DG+TYERAAIERWL+    SP TG+I+ T+V+F N++L
Sbjct:    8 VCPITQEAIVDPMVAADGVTYERAAIERWLATSRLSPATGQIMATRVLFPNYTL 61          
BLAST of mRNA_H-canaliculatus_F_contig130.2492.1 vs. uniprot
Match: A0A7S3WUR5_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3WUR5_EMIHU)

HSP 1 Score: 69.3 bits (168), Expect = 2.440e-10
Identity = 33/62 (53.23%), Postives = 42/62 (67.74%), Query Frame = 1
Query: 2080 PDQEQREHLCPITRCPMEDPAVACDGITYERAAIERWLSEHDTSPVTGKILETKVVFKNWSL 2265
            P++   + +CPIT   M DP VA DG +YER+AIERWLS   TSP+T   LE+K +F N SL
Sbjct:   50 PEEPPDDFICPITTEIMSDPVVAADGQSYERSAIERWLSTKSTSPLTSAELESKGLFPNHSL 111          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig130.2492.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3T3_ECTSI4.860e-7042.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KRG9_9PHAE4.050e-3248.81Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KDQ7_9PHAE4.200e-3181.33U-box domain-containing protein n=1 Tax=Ectocarpus... [more]
D7G3T4_ECTSI3.200e-2188.68Protein kinase n=1 Tax=Ectocarpus siliculosus TaxI... [more]
A0A7S1UIP8_9STRA7.070e-1731.44Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7S1UFM5_9STRA8.320e-1357.89Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7R9UF69_9STRA8.560e-1364.15Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7J6LA49_PEROL1.810e-1164.58U-box domain-containing protein n=1 Tax=Perkinsus ... [more]
A0A7S2FZS1_9STRA3.690e-1157.41Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7S3WUR5_EMIHU2.440e-1053.23Hypothetical protein n=1 Tax=Emiliania huxleyi Tax... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig130contigH-canaliculatus_F_contig130:21711..33195 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score75.9
Seed ortholog evalue8.1e-11
Seed eggNOG ortholog35128.Thaps24305
EggNOG free text desc.U-box domain
EggNOG OGs2CN9V@1,2QUQY@2759,2XC1Q@2836
COG Functional cat.S
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons11
Model size3141
Cds size1986
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929032.8604174-UTR-H-canaliculatus_F_contig130:21710..225501622929032.8604174-UTR-H-canaliculatus_F_contig130:21710..22550Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig130 21711..22550 -
1696845654.818963-UTR-H-canaliculatus_F_contig130:21710..225501696845654.818963-UTR-H-canaliculatus_F_contig130:21710..22550Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig130 21711..22550 -
1622929033.0337415-UTR-H-canaliculatus_F_contig130:32880..331951622929033.0337415-UTR-H-canaliculatus_F_contig130:32880..33195Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig130 32881..33195 -
1696845654.9827871-UTR-H-canaliculatus_F_contig130:32880..331951696845654.9827871-UTR-H-canaliculatus_F_contig130:32880..33195Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig130 32881..33195 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929032.8727415-CDS-H-canaliculatus_F_contig130:22550..226801622929032.8727415-CDS-H-canaliculatus_F_contig130:22550..22680Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig130 22551..22680 -
1696845654.8315868-CDS-H-canaliculatus_F_contig130:22550..226801696845654.8315868-CDS-H-canaliculatus_F_contig130:22550..22680Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig130 22551..22680 -
1622929032.8832068-CDS-H-canaliculatus_F_contig130:22918..230071622929032.8832068-CDS-H-canaliculatus_F_contig130:22918..23007Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig130 22919..23007 -
1696845654.8422544-CDS-H-canaliculatus_F_contig130:22918..230071696845654.8422544-CDS-H-canaliculatus_F_contig130:22918..23007Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig130 22919..23007 -
1622929032.893165-CDS-H-canaliculatus_F_contig130:23327..235761622929032.893165-CDS-H-canaliculatus_F_contig130:23327..23576Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig130 23328..23576 -
1696845654.8579845-CDS-H-canaliculatus_F_contig130:23327..235761696845654.8579845-CDS-H-canaliculatus_F_contig130:23327..23576Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig130 23328..23576 -
1622929032.907349-CDS-H-canaliculatus_F_contig130:24057..242261622929032.907349-CDS-H-canaliculatus_F_contig130:24057..24226Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig130 24058..24226 -
1696845654.8695822-CDS-H-canaliculatus_F_contig130:24057..242261696845654.8695822-CDS-H-canaliculatus_F_contig130:24057..24226Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig130 24058..24226 -
1622929032.9300435-CDS-H-canaliculatus_F_contig130:25800..259081622929032.9300435-CDS-H-canaliculatus_F_contig130:25800..25908Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig130 25801..25908 -
1696845654.9010324-CDS-H-canaliculatus_F_contig130:25800..259081696845654.9010324-CDS-H-canaliculatus_F_contig130:25800..25908Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig130 25801..25908 -
1622929032.9509323-CDS-H-canaliculatus_F_contig130:26720..268301622929032.9509323-CDS-H-canaliculatus_F_contig130:26720..26830Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig130 26721..26830 -
1696845654.9122567-CDS-H-canaliculatus_F_contig130:26720..268301696845654.9122567-CDS-H-canaliculatus_F_contig130:26720..26830Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig130 26721..26830 -
1622929032.9634757-CDS-H-canaliculatus_F_contig130:28460..287151622929032.9634757-CDS-H-canaliculatus_F_contig130:28460..28715Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig130 28461..28715 -
1696845654.9227526-CDS-H-canaliculatus_F_contig130:28460..287151696845654.9227526-CDS-H-canaliculatus_F_contig130:28460..28715Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig130 28461..28715 -
1622929032.977765-CDS-H-canaliculatus_F_contig130:29437..297271622929032.977765-CDS-H-canaliculatus_F_contig130:29437..29727Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig130 29438..29727 -
1696845654.9307353-CDS-H-canaliculatus_F_contig130:29437..297271696845654.9307353-CDS-H-canaliculatus_F_contig130:29437..29727Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig130 29438..29727 -
1622929032.9912066-CDS-H-canaliculatus_F_contig130:30290..306141622929032.9912066-CDS-H-canaliculatus_F_contig130:30290..30614Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig130 30291..30614 -
1696845654.9390101-CDS-H-canaliculatus_F_contig130:30290..306141696845654.9390101-CDS-H-canaliculatus_F_contig130:30290..30614Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig130 30291..30614 -
1622929033.00544-CDS-H-canaliculatus_F_contig130:31731..318371622929033.00544-CDS-H-canaliculatus_F_contig130:31731..31837Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig130 31732..31837 -
1696845654.9487135-CDS-H-canaliculatus_F_contig130:31731..318371696845654.9487135-CDS-H-canaliculatus_F_contig130:31731..31837Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig130 31732..31837 -
1622929033.016692-CDS-H-canaliculatus_F_contig130:32724..328801622929033.016692-CDS-H-canaliculatus_F_contig130:32724..32880Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig130 32725..32880 -
1696845654.9586835-CDS-H-canaliculatus_F_contig130:32724..328801696845654.9586835-CDS-H-canaliculatus_F_contig130:32724..32880Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig130 32725..32880 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig130.2492.1prot_H-canaliculatus_F_contig130.2492.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig130 22551..32880 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig130.2492.1

>prot_H-canaliculatus_F_contig130.2492.1 ID=prot_H-canaliculatus_F_contig130.2492.1|Name=mRNA_H-canaliculatus_F_contig130.2492.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=662bp
MTAVEETLEVGRVHVGLIAGRRIARRGRGGMTELFGLVSAPPASPYCKIT
LGDSELSSGVGVRTTAGYAWNREQMAFPVKVQEMAVLRDPGKATHTEYQE
SEGGTTRGEKGEDGPSPSSPTRGGGKAGGVACGSSISRAAAAAAKAAAAH
EVSRRLTLKVQVFHRVDDGRTRPEAGAGAGAGAVVVSKGPGVQIGTAADS
PATNNAASRSGGTVGTGGATDGSDGDSDSGGGGGGGGNEDLLIGECSLDL
VELVCGRAPHVEEWLPLDSEGDLRLSLDYDSVGGVVPVPGDPVVLLCLSN
RLDFFPLPVWDGDDAEDLPRPGAPSWLWPGGGRAWLRRSSGGGGEGFRVE
EAGDDFFLISYPTPEGWRCAVEVHRFLVHPDHTAPRRWTLSGVRDHAAAT
PAAAAVREAVLSASQEESILEGGKGLAIAAFEGVMWTAARWRAGGLGRAR
DDVCFALDLTDAESSANSEEGRLQQRQQQPQREVAEGGRERGEESAGGDR
DGSHETDAVERPQLQQQQDRHDRRHLHQPSLPREGSGDDGHLESRGLEIS
PSVRVAAASAGGDRSTAGGSGGDEDGGGGGSESGGAFTPDQEQREHLCPI
TRCPMEDPAVACDGITYERAAIERWLSEHDTSPVTGKILETKVVFKNWSL
VSSSSSPVIDR*
back to top

mRNA from alignment at H-canaliculatus_F_contig130:21711..33195-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig130.2492.1 ID=mRNA_H-canaliculatus_F_contig130.2492.1|Name=mRNA_H-canaliculatus_F_contig130.2492.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=11485bp|location=Sequence derived from alignment at H-canaliculatus_F_contig130:21711..33195- (Hapterophycus canaliculatus Oshoro5f female)
CACGGTAGTCGCTCCACCCTACGCGTTTGTGGGTGACTAAAGCTGGGACC TAGCATCGTGAACACGTACATTTAAAGGCCTCTCGCCACGTGCATTATCC GGTCGCAATTATCGCAGGAACGCAGCTCCAAGCTTTACAACATTTTCGAC GGGGTGGGTGTAAAACTCCGCAGTCTCTTCGAACCCTCAGTCCTCGCGAC ATCCTCCGCGGGCGCGATCGTGTGCGTGCGTCGGTGAAAGCGTGGAACAG GGCTCCTTCTTGTTCGCCTTGCCTTAAGCGCACCCTTTTCTCGCTCGGCA TATTTGGCCGTGAGCATGACCGCCGTGGAAGAAACGCTGGAGGTCGGCCG CGTACACGTAGGCCTGATCGCTGGCAGACGCATCGCGCGAAGAGGAAGAG GCGGCATGACTGAGTTGTTCGGGCTTGTTTCTGCGCCGCCGGCCAGCCCC TACTGCAAGATCACGCTGGGGGTAAGATTTTTTGTTGGATGCTAGCTGTA TGACGGGAGCATCCAATCATCCCTGGGCTCTGTCGACTGTCGGGCGTCAA CGCATCGTAGACAGCCCTGCAACTTCAACCGCCGCACAGGTAGCACACCG CCTCTAATTGTTTTCACCAACGGGAGGACGCGGTAGGGGCGTTTCTTGCC CTTGCATGATAGCCTTGTGCCGGTCTGGTTGAGGGTTGGCATGTTCCCCC CGTCCAAACGGGTCGGCAAAGACGAAGTGATGGCGACTATTTTTGCTCGC AGTGTGGTGCGCACGGAGACGGCTTCGAGAACGTACTTGTACATTCGTTG CTTTTCGGCCAAGCCTTAACCACGCCTGCTTGCTACTTCTTCCTTTGTGC GACAAGGCGATTGAACTGCGGGCGATCAGGAATCAACGCCACGCATGGAG AACCATATGGTTTGCGCGAGTCCCCCATAGAGAGCGCCTCGGAGACTTGC GAAATTTTTATTTCGAGAAGGCGCTGAAGGGCGGCCAGTCGTTCTGTAAG AGAGACGTCACCTCTCTCATTTTTGAGCGCTCTTCGAGGCCTCGCGCACG GAGAAGGCCCTGACAGCAGTAGCGGCATTTGGAGGGCGGGATGTATTTGG CTTTTCCTCGCCCAGGCCACACAACTGCCTTTTCGCTGTTTGATATCGTT GTGGTCCTGTTCTCCATGCTTTGTGTGCCTGAATTCCGGTCACGGGCGTT GTTTTCGGCAGTGGCTTCACACGTTCGTGATAAACGTCAAAATCTTGGAT AGAATCAAGAGCAAGAGCAGCAACAATCCCAACAACTCTCGTGTTTCTCG TTTGCACTCCCTTCATGCACGTACGTATCCGCGGTATGCTGCATCGGTCA TACCGCAGGACTCCGAACTCTCCAGCGGCGTGGGGGTGAGGACGACAGCC GGATACGCATGGAACAGAGAACAGATGGCCTTCCCCGTCAAGGTGCAAGA GATGGCCGTTCTGCGTGCTCTCGTATAATCAGTTTGCATCTACCGTGCGC TCTTCCGGCTTACGCCGGTAAGCTGTTCCGCACGGTGTTAGCGAAGCAGT GGACGAAGTAGGGGGAAGGCCTTCTCGATGTCGATCTCTCGATGTCGATC TCTCGATGTCGATCTCGATTGCATGAGGCAGCGAGCAAGCAAAGGAAGCC TAAAGCCCCTAGGCTCGCGGAGGAAGGCCGTGCGTCGAGGCTTGAAGCGC GAGTGATCACGCACGGTAGGGCGCGGAGATGCAGCACAAAAATGTTGGAG ATTCGTGATGGGTAACCGCAGCAGCAGCCACAACAGCAGCAGGGACCCTG TATTCCCCGCAATGTAAGGCATGGTGGCGGGTATTGAACGCAGCTGAATA GGCCGCCACAGCTCTGCGATGTCCCGGCTGCGGTGGGAAATTTACCGATG CATTCTGCATGAAGAGTGCTGACGTGGTGGTGGTTGTTATTGTTGTTGGG GTTGGGGTTGAGGTTGCTATTGCCATCGTTGTTAAAAACGATGCTGTCGT TCTCGAGGTCCGTGATGTGCTGTATGTGGACCGTGCGGAAGGGTACAGAC CAGAGCTACTAGTGCGCGTCACAACGAAGGGAACGGAGATCCCTCTTTTT TTTCGTTCGCATGGATCCTGTGCGCCGGGCAGACTTCCACGGTTGCGGCC GAGGGCCGAAGAGTGTTGAGAAGGTTTGGTACGGGAGCGGAATTCCGTGT CAACCTTAGAGTGTAAATCAGGTCGAGCTGCCGTACTTCGTCAAAGTCAG TGCTTCACTTTTTTTTATTTCTTTAATGGCGGGAGTCCTCTTCCTCCAAA ATCCTAGCGGGAACTTTTCTGTCGCTGCTGTTTTCCCTCGCTGCTGCTGC TGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTCCTGCTG CCGCCGCCGCCGGCATGCATTTGCACGGTTCCCCATGCCCGACCCCCTCC GCCGACGGTGTTTCAATCGCGTTCCACACCAAACCACCAGGTTCCTTTGC CGTGTATAGTGGGAGCCTATGGTACTTGGCGCCACACAGAAAGCGCCGAC GGCAGCGGGGGACGAGGAGGGGGTAGCAAAGGTGATCCTGGCAAGGCGAC ACACACAGAATACCAAGAGAGCGAAGGAGGAACAACGCGGGGGGAGAAAG GAGAGGATGGACCGAGCCCCTCTTCCCCAACGCGCGGCGGCGGAAAAGCG GGGGGGGTGGCCTGCGGCTCGAGCATTTCGCGGGCGGCGGCGGCGGCTGC GAAAGCGGCGGCAGCTCACGAAGTGTCTAGGCGGCTGACGCTGAAGGTCC AAGTTTTTCACCGGGTTGACGACGGACGAACTAGGCCGGAGGCGGGGGCG GGGGCGGGGGCGGGGGCGGTAGTGGTGTCGAAGGGGCCGGGGGTTCAGAT TGGGAGTAGGGGCGGTGCCTCAGCGGGAGAGGTGAGAGGCAGACGAACAG GAAACGATAGGTAAATGTGAGTTGTGTCATGCCTTGCGTGTGACGTGAGG GGCCGCGTGGGCCCGTCCGTCTGTCTCTTCCGAGGAAAACGCCTGCGTGT TCCGGAGAGGTCTCGTCAAAGGGTAGACATTTGAAGGGGCGGGGAGAGGT TTTTTTCGCTTGTGTTGACCTTTCTTACGAGCACGGTGTGCTCGATATCT CGGGACGCTTTTGCCGTCGACGTTTCTGTCCCTCTACAGAAGACGTCGTT TTTTGCTCCAGAGACAAGTTGTATTTGTTTCCAACATCGCGACTTTTCTG AGGGAATGGACAGGAGCCCCGCAAAGTTGCCGTACTTTCCGGTCCGCCTT CCGACGGCAACTGCCAGCATCGCGCTTTGTTTTCCTAAAGTTTTGTATCG TCTGCGCTCGGTCGCGTCGCACTGGCCTGTCCTTCTTCCCGTCCTCCCGG AACAACAAAAAACACCAACAACGACGTCACCTATCAGGTAAAAACGTCGA TTCTGACGGGATCGGCAGCGGCAGCGGACTCACCCGCAACAAACAATGCC GCCAGTCGAAGCGGGGGTACAGTGGGCACGGGTGGCGCAACCGACGGCAG TGACGGAGACAGCGATAGCGGCGGCGGTGGCGGCGGCGGCGGCAACGAAG ACCTGTTGATAGGAGAGTGCTCCCTTGACCTCGTTGAACTGGTGTGTGGG CGCGCGCCGCACGTGGAGGAGTGGCTTCCTCTCGACAGCGAGGGTGACCT AAGGCTGTCGCTGGACTACGACTCGGTGGGGGGAGTGGTGCCCGTGCCTG GCGATCCGGTGAGAGGTGGTGGAGACAGGAAGGAAGGCAGCCGTTCCCCT TCGCGGTTGTTTAGGCATCTTGTCGATAGCTGTGATAGCAGTGTTGTTGG TGCTTGTCTTCGTTGTAGCGAGTGCTCTACCTGCTCCGTGGTGACGGTGC TTTACAGTGGGAAAGGTCGCCCGCTCTGTTTGCTCTGACGGCCTGGGGGG GGAGCAGGGGGGGGGGCTTGACGGCCGAACACGCGGGCGTCGTTGAGCCT CGTCGTTGCGACCCTTCGGATGGAGACACGCCCACGCGTCTGTTTCGAGG CAGCGTTGTTCACTACTGCAGTCTTGGACGGCTGGTTTCCGACACCCTTG ATGCACGCCTCCGGAACGACGTTCGTCACATTGTGCAAGCAAAACAACCA CAACCACAACAACAACAACAACAACAACAACAACAACAAAAGCAGCAGTA CCCGACCTTCCTGGTGCGTCAAGTCTTTTTTCACGTTGCTGACGTAGAAG CCACTGGAAACCTTAACCTTCTTCCGCCGCCGTCGAAGAAGCACGTGCAT CTCGCTTCAGGAGGCTTGGACGGGCGTCGCTTCCTTGCCCGAAAGAAAAG CGTGGTCTGCTGCCAAACCGACGAACCCAATAAAAAATTGGCACCGCCTC TCTTCTTCGAGACCTCCCCCAAACGTCCCCAGTCCCTAGCAACTCACCCC CACGGGGCGTGCTTCCCCGACTACTTGCAGGTGGTCCTCCTCTGCCTTTC AAACCGCTTGGATTTCTTTCCCCTGCCGGTGTGGGACGGCGACGACGCCG AAGACCTCCCCCGACCTGGGGCCCCGTCGTGGTTGTGGCCGGGGGGGGGG AGAGCATGGTTGCGCCGGTCGTCGGGAGGTGGCGGCGAAGGGTTTCGAGT GGAGGAGGCCGGGGACGACTTTTTCCTCATCTCTTACCCTACGCCAGAGG GGTGGCGATGCGCGGTGGAAGTGCACCGCTTTCTCGTGAGTGCCGTGTCC GTTCGATTCCGCAGGTTTGCGGATTGTGTCTGTTCGTCTGTTTGTCCATC CGTCCGTCCGTCTGCCTCCCGTTTGAACCCTGTGTTCGCCTGCTGTCTAA TTTGCTTGCCTAGGTGCCTTCTGGGATGCCTGCATGTTTGCGTGCCTTTT TGTGCGTGCAGTTGTTCGGAGACGACTTGGCTTGTTGGTCTGTCTCCTGT CGTGTTGCTTGTTTTTCTGTTGTAGTGTTCCTTTGATTCTCTCGTTGATT CATCGATCCGTCTACCTCGCTCCCTGTTCAGCTCGTGTGTTCCTCTGAAT GGCTCCAGGCATCTACATCTTCGTGTCCGTTTGCCTGTTCCCCGTTGTAT GGTGTTCCCCTCTACTACATCTCCAGTCACTTCGTGGGAGGTGACACGTC CTTCGCCTTTTCTCTTACTTGATTGTGTTTGGTCGTCGTATGTGATGTCT CACGTTGCGTTTTTCCACCTCTTTCTGGAGAAAAGAGCCAACGACGCAGA AAAAACACTCGGACTCGAGTCAGGACTCGAGATTTCGTTTTCGTTTTTAC GGTATCTTATATCGTTCACCCGGCGCCATGTGCCCCCTCGCCCCCCGGCT TTTCTCCCGCCACGGCAAGCTGTACCGCGCTCCAACACGCTGCAGTTCCT TTACACCGAAACAGCCCGTCTTCGATCTCCACAAGTCAGATGAAGACAGA GGTTCCAACGGCATGGCCGTAGGAACCACCGTTGGCAGTGAAGATTGGTA GCCGCACGAGTCGCGTAGAAGTTCCGGGGGGGGGGTGGTATCGACCTGCT AGCTCGAGAGGCATGCTTGGCAGTGCAAGAAGTCGGTCGAAGTCCTAATC CCCACCCCGCCGGCTGCGGATGGATTACTCTTCGGACCTGGGACCAGTAA AGACTATCACCATCCCTGTTTCAGCGTTTCTGTTGGATTTGATCCCAAGG ATATGTCGAACTTGGCAGGCGCGCTCGTATTGATCCCTGATACCTACTCC CAGAAGAAAGTGAGTTGGGGAATGCGAATGTGATCTTCGTTGAGAAGAGG GGAAAGCACTCGACGAGGACGTGTTTAAATCGTTTCAGCATGACTGGGCG GAGGGTCGTTGAAGGCAGCGGTGTAGAAACACGAGCCATCCCGGGAAAAT TCACCACGAATACAAAAAATAACGAAGAGGCGATGCAACTATACACATTG GGCAAGGGAGTGCGTTGAAGGCGTATCAGGTCGCGATCGTCCGACGACTG GGGGCGTTTTTCAGAAGATTTCGACCGAACCCCGCTCGGTCTCGACAGAG GTAACGGGCGACATAGGACAGCAGTGTTCCTAGGAGTAGAAACCAGGCAA AAAAAAAGAGTACCCTGCCCCACCCTTCCCCCCCTTCTCGCCTCGACGTT TCCCATCCCGGCCGGCCGCGGGGGTCTCTAAGGCCTAAGATCTGGAGACC ACGAGGCCGGTCACGGCGATGAGCCCTCCCCCCCCATGCGCCCGCACGGC GAGAAGGACCATTCGCAGCCGTACGGTTCGCCGAATGCATCCCGCTGGCC GCTCCCTGGCATCTGGGCTCCTGCTGTTGCTGATGGCACTGTCGTCGCCG ACGTTCCCGTGACAGGTGCACCCCGATCACACAGCCCCCCGCCGGTGGAC CCTTTCCGGCGTGCGGGACCACGCCGCCGCTACCCCTGCCGCCGCGGCGG TGCGTGAGGCGGTGCTATCTGCCAGGTGAGACGAGCCGGAGGAGGGGGGA GGGGTCTGGGGAGGACCGTGGCTGACATCTGCTCTTTTTTTTTTTTAAAT GTACAGGCGAGCGCGAGGTTGAACAGATGTAGTCCCTCGCACGCGGTGCT TTCGGTAGACGGGGAGGGAGGAGGAGTACCGCAGTTTCAAGAGTAGATTA CTTTCAGTACACAGCGAGGGTGGAGGGGCACAGTTCGAGGTTCGCGTTTT CTGAGGCTATACACCTGGGAAGAGCTTTGGAATCCGGGGGGTGTGGGTGA CGGGTTTCCGACGCTGGGGGATGGGATATGGGGCATTCAAGTTGGATTGC TTCTCTTTCTGCTTTGACCCTGAGTCCTCTTCTCCTCTCGGGCTTTACTA TCGCAGATGGCGCTTGCGTGTCGCACTTTTTTCATGACTACAAAACAATG ATGGTCTGAACTGACGCGTGTTTCCGCAGGGCTTACGATGAACCGGCGTG CATTGTCGTGCTCCCTACCGCACTGTCTCGGCCCGGATCCCCCCCCTCGC GCCCTATCCGTGTTGAAGTGTTGTGTTGTTGTACGAGCTTCGGAAACCCC CTATGGTAGTGTCGACAAAAACGCCGAGTGTTGCTTGTTGCTTCTCGTTT GATACGTGAGATCGCACCACCAACCAAGATCGAACATCGAAGGGGTGGAT AGCAGGCATGGATGCGCAGATGCCGGCGCCAACAACGACAACCACAACCA TAACGACGACGACAACAATAACCAACAGCAACGTTCCTCCCTGGGCGTGC TTGCTCTCTTTCGCGCGTGCTTGGGGTGGTTCAACAGCCAGGAGGAGTCG ATCTTGGAGGGAGGAAAGGGATTAGCCATCGCAGCGTTCGAGGGCGTCAT GTGGACAGCTGCGCGGTGGCGGGCCGGGGGGCTGGGCAGGGCCAGGTGAC GACAAATACAGACCTGCGGTAGAGATGACGGGGGGGGGGCAGCAGGCGGT TCAAGCCGTCACGATCGTCCATACAATGCAACGGACCGCTCCGCAGCTTT CTCCCGTTGTCTATTTCATGCAACCGATTGATTCGTGCCCTGTCGGGGAT GGCTGTGGTGCCTTGTCCACGCACTGGGCCGACTCTTGTCCCGCGGTGTT GTTTCCCCAGGCAGCCCACGGATTTGCCCCCGCATCGCGTCCCTTTATGC CAAAGGATTGGCTTGTTCCACAACGTTTTTTGCTGTCTCCCATACGCGAC ACTCGACTTGTTCTTCTTTGCGTCGCCGCCCCCCCGCGAGCGACCTAAGC GTCGTAGTGGGCTGTGAAGTGAACAAACACCACGATGGAACAATTTGCAT CTGCTTTCTCCCCTCGGCGGGGTCAATCAATGGATCGCAAGGAGGGTAAC GTTGCGGGGTAGCTTGGCACGGGTCATCAAGCGTGCTTTCATGTGTCTTC GTGGTAGAAGTAACGAAGTACGAAATGACAAAATATCGAGCGAGAAGTGT CTGAATAGAAAGGCGTCTGGATAAGAAGGACGGCTGTCTGAGGCAGTAGG GGTTGATCCAATCGCGAGGCCCGCAGCGCTTGTGTTTCCAACTTAGCGAG GTTTTTTAAAGAAAGAGGTTTTTTGTCCGGCTAACTGACTGCATATTGTG ACCGTTCAGCTGACAAACGCCTGGACCATGCACACACGTGACAACTGTAA TGTGCTATCTACTAGACGATTATCGGGTGCGACCTGTAGTGATTCGAGAC GGAGACACCTCAGACATCTGCCTCACCTCGACGGGGGCACAGGGAGGCAA GCTGCCGGGGGCGAAGTGTTCGCTAAATGGACAAGTGTGACACTAGAGCT TGTTTTCGAACAGAAGCTTCGCGTTATCGCCAAGCAGGATCACGGTCGGT GATGCTCGCGTTTCGCGTGCAAGTGGAAAGCTCATATTTTGTCCCAACCA ACCACAGACAATGTACCCGCATTCTTTGGAACTGAACCGAAACCTCGAGG TACGCCTCGCGCGACACCCGCCGGGAGGTGTTCCTACGGTCTTGTCATGG CTTTCTTGAAAAGGCTCGATACAGAAAGGTTCGCACGGCTGCCGCCTGTC TATCGAGGCATCCTTCTTCTCGCGTTTGTTGAGCACGCCTTGGCGGCATG AACCGTGAACGCAGAGATAGTTCACGGTCTTGTTGTTTTCGTCTGTGCCC CCCCCCATTCCACCCTTGGATCCTTGACTTATCCCCTTGTTTATCCTTCT CCTCTGGTATTATCGTCCATCGCAGTTGCGTCTTCCGCGTTGCTGTCCGC CTGTTTTGTCTCTGGCGTGGTTTATTCCTCCGTGGCATACCCGTCTCCGC GTATCTCCGCTTCTCCGCCGACCTACGGGGATGAGCGAAACCGATCCGCA CCACACCCTCCGCGTGCTCCGCGTGCTCCGCGTGCTCCGCGTGCTCCGCT CTCCCAAGGCTTAAGGAGAAAGCGACTAAATCTTGCCCCAATGGAAACTC CTTTCACCGACAATCGCAGAGACGACGTATGCTTCGCTCTGGACTTGACC GACGCCGAATCCTCCGCCAACTCCGAAGAAGGGCGGCTGCAGCAGCGACA GCAGCAGCCTCAGCGGGAGGTGGCAGAAGGGGGGCGGGAAAGGGGCGAAG AAAGCGCAGGCGGTGACCGAGATGGCAGCCACGAGACGGTGGGCTTGCAG CTTTGGGCCGACAATCTGGGCAATTATTTCATGTTTGACACATCGGGGTT GGTTCCGGCCAATGACCCGTTGTTCGGGAAGGCGGCAAAGAATTACGGCA CAGAACACGTCCAAATCCATCCAGCGATCTTGTCCTCACGGGGATGGTAG CAGCAGCAGCAGCAGCAGTTGACTTTCAACTGAAGGGATCCTTGCAGGCC TCCTCGGGGTACCGCGTTGACTATCTCGATGGCGCCGATTCGATTTTTTT TGCTGGGTCCTATCCCAATCTCGAAGCTCGTGCACCTAGGCTCCGCCGTT CCGTTCACTGCAAGCGCCCGTGGAAGAAACGATCCTGTCGTTGCTCCTCG ACGTTTCACGGGGCGCTTCGAAGCACGACCGCGCTGAACAAAGTGAGAAC CTAGCTCAGAGGGTAATCCTTTCTGTTTAGTTGACTCAAGGAATGTCCCC GTCGCGCCGCCGTTGACAGGACGCGGTGGAGCGGCCTCAGCTCCAACAGC AGCAGGACCGCCACGATCGGCGCCACCTCCATCAGCCCTCACTGCCGCGA GAAGGCTCCGGCGACGACGGGCATCTGGAAAGCAGAGGCTTGGAAATCTC TCCTTCCGTGCGGGTTGCCGCCGCTTCGGCTGGTGGCGACAGGAGCACAG CCGGAGGCAGCGGCGGTGATGAGGATGGCGGTGGCGGCGGCTCCGAAAGT GGCGGTGCCTTCACGCCGGTGAGGTTTGCGCAACGGAATATCGTGACAAG ATATGGCGCTCGTCTATTCTTTCAAGATACCCGCGGCAAGCGGCGACCCC CCCCCCCTCCCCCCCCCTCCTTACCACGAAATACCTGGCCCCCCTGACTC GAATTCCTCAACGGGTCCTCGCCGTCGTAGATGTCAACCGGAACACACGG AGGAGACCTCGAGCGGGTGCAAATTACCTGTGCCCCCCTCCCCCCCTGGC GTGGGCTAGTCGTCGCGCTAGCACCACCCGGCAACGATATTTTTACCTGC AAGACCACCTGCCCCGCCGCCTTCGTCGCCGCCAACAGGACCAGGAGCAG CGGGAGCATCTTTGCCCGATCACGAGGTGCCCGATGGAAGACCCGGCCGT AGCCTGCGATGGGATTACGTACGAGAGGTGGGTGGGGAAACTGGAAGAGG GCCCCTTATCTGTGTTGCGTGGATGAGTCTTGGTTTGATCGATCCTGGAA GGTATATGTTATATCTTGGACCCCTGGATCCAAAGGGTACGAGGAGAGCG CCAGGGGCAGGGGGCCGGCACGTTTCGAACGTAAAAAGATGGTCAACCCT TGTAAGTAGAGGTGGGCACAACAGCAAGACTAACAAGCATTATTCCCGTT TCCTGTTGTACACAGGGCGGCCATCGAGCGTTGGCTATCGGAGCACGACA CAAGCCCCGTCACAGGGAAAATTCTCGAAACGAAGGTGGTCTTCAAGAAC TGGTCCCTGGTTTCCTCGTCCTCTTCCCCCGTGATCGATCGATGATTGGG GAAGGCGTCTTCGAGAATTTCATGCTGTTTGTGCTCCATCGTGGGTGCGC GGATTGGCGCACACAAACGCCGTGCGGGGTCGGTAGAGCGCTCCATACTC GATAGATCTTTCGTGATGTTGTGATCGAGGGCTTTCGTTTTTCTTCTCAG CAGGAACGAAGTATACGGCAAGGCGGAGGGAGGCAACGTGCACGGTACCC CCGAAGTTACGGCATTCGATTCAGTTTCTGTGCGTGTATAGTTTGTGGGT GAACGAGTGTATAGTTTGAAGTTCAGATGTGCTTTGTAAATATTTGAAAA CAAATCCATCTTTTTTGTTCGTGGCACCTTCTCGTCTTCGGACTTCTTTC CCACTGGATCTGCCTGTTTTTTGTCTCGGGGGAGGTAAGGAAAGAGATGG GGAACGTCGGCAGCACTGGGACAGAAAATGTGACCAACAGTCCTAAGCCT CTCGTTCGTCACCACTGACAACTGCTGGAGATCGCAGCGAAGAGAGAACC GGGGAGAGAAGATAATGAATGAAGAGCAGAGACGAGGCGAAAGCATTGCA CGGTCAGGCGTTGGGAAGAGAGAGGGGCGGGGGCGTGAGATGCCCACGAG ACGCACACGAAACCCAAGGTGGAGGAGGGCGACGGGTCTTCTGTGTCTCC GCAGAAGACCGTTCTAAGGATCAGACCGCGGCGCTGGCCGTCACGAAATA ATGACGCGGTGACCGCGTCGGTGGTGACGCCGCATAGTAGACGAGCAGGT GGACACCAGCGAAAGGGTATCCCGTCCCCCGTGGCGAGAAAAGAGAGTGA CGTCCGTGGGCGCCAACACAAAAGTTGAACCCCAC
back to top

Coding sequence (CDS) from alignment at H-canaliculatus_F_contig130:21711..33195-

>mRNA_H-canaliculatus_F_contig130.2492.1 ID=mRNA_H-canaliculatus_F_contig130.2492.1|Name=mRNA_H-canaliculatus_F_contig130.2492.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=3972bp|location=Sequence derived from alignment at H-canaliculatus_F_contig130:21711..33195- (Hapterophycus canaliculatus Oshoro5f female)
ATGACCGCCGTGGAAGAAACGCTGGAGGTCGGCCGCGTACACGTAGGCCT
GATCGCTGGCAGACGCATCGCGCGAAGAGGAAGAGGCGGCATGACTGAGT
TGTTCGGGCTTGTTTCTGCGCCGCCGGCCAGCCCCTACTGCAAGATCACG
CTGGGGATGACCGCCGTGGAAGAAACGCTGGAGGTCGGCCGCGTACACGT
AGGCCTGATCGCTGGCAGACGCATCGCGCGAAGAGGAAGAGGCGGCATGA
CTGAGTTGTTCGGGCTTGTTTCTGCGCCGCCGGCCAGCCCCTACTGCAAG
ATCACGCTGGGGGACTCCGAACTCTCCAGCGGCGTGGGGGTGAGGACGAC
AGCCGGATACGCATGGAACAGAGAACAGATGGCCTTCCCCGTCAAGGTGC
AAGAGATGGCCGTTCTGCGACTCCGAACTCTCCAGCGGCGTGGGGGTGAG
GACGACAGCCGGATACGCATGGAACAGAGAACAGATGGCCTTCCCCGTCA
AGGTGCAAGAGATGGCCGTTCTGCGTGATCCTGGCAAGGCGACACACACA
GAATACCAAGAGAGCGAAGGAGGAACAACGCGGGGGGAGAAAGGAGAGGA
TGGACCGAGCCCCTCTTCCCCAACGCGCGGCGGCGGAAAAGCGGGGGGGG
TGGCCTGCGGCTCGAGCATTTCGCGGGCGGCGGCGGCGGCTGCGAAAGCG
GCGGCAGCTCACGAAGTGTCTAGGCGGCTGACGCTGAAGGTCCAAGTTTT
TCACCGGGTTGACGACGGACGAACTAGGCCGGAGGCGGGGGCGGGGGCGG
GGGCGGGGGCGGTAGTGGTGTCGAAGGGGCCGGGGGTTCAGATTGGGAGT
GATCCTGGCAAGGCGACACACACAGAATACCAAGAGAGCGAAGGAGGAAC
AACGCGGGGGGAGAAAGGAGAGGATGGACCGAGCCCCTCTTCCCCAACGC
GCGGCGGCGGAAAAGCGGGGGGGGTGGCCTGCGGCTCGAGCATTTCGCGG
GCGGCGGCGGCGGCTGCGAAAGCGGCGGCAGCTCACGAAGTGTCTAGGCG
GCTGACGCTGAAGGTCCAAGTTTTTCACCGGGTTGACGACGGACGAACTA
GGCCGGAGGCGGGGGCGGGGGCGGGGGCGGGGGCGGTAGTGGTGTCGAAG
GGGCCGGGGGTTCAGATTGGGACGGCAGCGGACTCACCCGCAACAAACAA
TGCCGCCAGTCGAAGCGGGGGTACAGTGGGCACGGGTGGCGCAACCGACG
GCAGTGACGGAGACAGCGATAGCGGCGGCGGTGGCGGCGGCGGCGGCAAC
GAAGACCTGTTGATAGGAGAGTGCTCCCTTGACCTCGTTGAACTGGTGTG
TGGGCGCGCGCCGCACGTGGAGGAGTGGCTTCCTCTCGACAGCGAGGGTG
ACCTAAGGCTGTCGCTGGACTACGACTCGGTGGGGGGAGTGGTGCCCGTG
CCTGGCGATCCGCGGCAGCGGACTCACCCGCAACAAACAATGCCGCCAGT
CGAAGCGGGGGTACAGTGGGCACGGGTGGCGCAACCGACGGCAGTGACGG
AGACAGCGATAGCGGCGGCGGTGGCGGCGGCGGCGGCAACGAAGACCTGT
TGATAGGAGAGTGCTCCCTTGACCTCGTTGAACTGGTGTGTGGGCGCGCG
CCGCACGTGGAGGAGTGGCTTCCTCTCGACAGCGAGGGTGACCTAAGGCT
GTCGCTGGACTACGACTCGGTGGGGGGAGTGGTGCCCGTGCCTGGCGATC
CGGTGGTCCTCCTCTGCCTTTCAAACCGCTTGGATTTCTTTCCCCTGCCG
GTGTGGGACGGCGACGACGCCGAAGACCTCCCCCGACCTGGGGCCCCGTC
GTGGTTGTGGCCGGGGGGGGGGAGAGCATGGTTGCGCCGGTCGTCGGGAG
GTGGCGGCGAAGGGTTTCGAGTGGAGGAGGCCGGGGACGACTTTTTCCTC
ATCTCTTACCCTACGCCAGAGGGGTGGCGATGCGCGGTGGAAGTGCACCG
CTTTCTCGTGGTCCTCCTCTGCCTTTCAAACCGCTTGGATTTCTTTCCCC
TGCCGGTGTGGGACGGCGACGACGCCGAAGACCTCCCCCGACCTGGGGCC
CCGTCGTGGTTGTGGCCGGGGGGGGGGAGAGCATGGTTGCGCCGGTCGTC
GGGAGGTGGCGGCGAAGGGTTTCGAGTGGAGGAGGCCGGGGACGACTTTT
TCCTCATCTCTTACCCTACGCCAGAGGGGTGGCGATGCGCGGTGGAAGTG
CACCGCTTTCTCGTGCACCCCGATCACACAGCCCCCCGCCGGTGGACCCT
TTCCGGCGTGCGGGACCACGCCGCCGCTACCCCTGCCGCCGCGGCGGTGC
GTGAGGCGGTGCTATCTGCCAGGTGCACCCCGATCACACAGCCCCCCGCC
GGTGGACCCTTTCCGGCGTGCGGGACCACGCCGCCGCTACCCCTGCCGCC
GCGGCGGTGCGTGAGGCGGTGCTATCTGCCAGCCAGGAGGAGTCGATCTT
GGAGGGAGGAAAGGGATTAGCCATCGCAGCGTTCGAGGGCGTCATGTGGA
CAGCTGCGCGGTGGCGGGCCGGGGGGCTGGGCAGGGCCAGCCAGGAGGAG
TCGATCTTGGAGGGAGGAAAGGGATTAGCCATCGCAGCGTTCGAGGGCGT
CATGTGGACAGCTGCGCGGTGGCGGGCCGGGGGGCTGGGCAGGGCCAGAG
ACGACGTATGCTTCGCTCTGGACTTGACCGACGCCGAATCCTCCGCCAAC
TCCGAAGAAGGGCGGCTGCAGCAGCGACAGCAGCAGCCTCAGCGGGAGGT
GGCAGAAGGGGGGCGGGAAAGGGGCGAAGAAAGCGCAGGCGGTGACCGAG
ATGGCAGCCACGAGACGAGACGACGTATGCTTCGCTCTGGACTTGACCGA
CGCCGAATCCTCCGCCAACTCCGAAGAAGGGCGGCTGCAGCAGCGACAGC
AGCAGCCTCAGCGGGAGGTGGCAGAAGGGGGGCGGGAAAGGGGCGAAGAA
AGCGCAGGCGGTGACCGAGATGGCAGCCACGAGACGGACGCGGTGGAGCG
GCCTCAGCTCCAACAGCAGCAGGACCGCCACGATCGGCGCCACCTCCATC
AGCCCTCACTGCCGCGAGAAGGCTCCGGCGACGACGGGCATCTGGAAAGC
AGAGGCTTGGAAATCTCTCCTTCCGTGCGGGTTGCCGCCGCTTCGGCTGG
TGGCGACAGGAGCACAGCCGGAGGCAGCGGCGGTGATGAGGATGGCGGTG
GCGGCGGCTCCGAAAGTGGCGGTGCCTTCACGCCGGACGCGGTGGAGCGG
CCTCAGCTCCAACAGCAGCAGGACCGCCACGATCGGCGCCACCTCCATCA
GCCCTCACTGCCGCGAGAAGGCTCCGGCGACGACGGGCATCTGGAAAGCA
GAGGCTTGGAAATCTCTCCTTCCGTGCGGGTTGCCGCCGCTTCGGCTGGT
GGCGACAGGAGCACAGCCGGAGGCAGCGGCGGTGATGAGGATGGCGGTGG
CGGCGGCTCCGAAAGTGGCGGTGCCTTCACGCCGGACCAGGAGCAGCGGG
AGCATCTTTGCCCGATCACGAGGTGCCCGATGGAAGACCCGGCCGTAGCC
TGCGATGGGATTACGTACGAGAGGACCAGGAGCAGCGGGAGCATCTTTGC
CCGATCACGAGGTGCCCGATGGAAGACCCGGCCGTAGCCTGCGATGGGAT
TACGTACGAGAGGGCGGCCATCGAGCGTTGGCTATCGGAGCACGACACAA
GCCCCGTCACAGGGAAAATTCTCGAAACGAAGGTGGTCTTCAAGAACTGG
TCCCTGGTTTCCTCGTCCTCTTCCCCCGTGATCGATCGATGAGGCGGCCA
TCGAGCGTTGGCTATCGGAGCACGACACAAGCCCCGTCACAGGGAAAATT
CTCGAAACGAAGGTGGTCTTCAAGAACTGGTCCCTGGTTTCCTCGTCCTC
TTCCCCCGTGATCGATCGATGA
back to top