mRNA_H-canaliculatus_F_contig130.2490.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig130.2490.1 vs. uniprot
Match: D7G8S9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8S9_ECTSI) HSP 1 Score: 171 bits (433), Expect = 2.330e-46 Identity = 84/100 (84.00%), Postives = 92/100 (92.00%), Query Frame = 3
Query: 288 SLTQSQRDALKVEGFGPTTVHFVKNNGGWMFNLIMAHLLFWLFGFTALLEFGYSDLNQNGSGQIRSGPSGSGVGIISTLLMAVATLVVIVKAIGYDPNRD 587
SLTQSQR+AL V+GFGPT VHFVKNNGGWMFNL+ AHLLFWLFGFTALLEFGYSDLNQ+ SGQI+SGPSGSGVGII+TLLMAV TLVV+ KAI YDPN +
Sbjct: 5 SLTQSQREALIVKGFGPTMVHFVKNNGGWMFNLVFAHLLFWLFGFTALLEFGYSDLNQDSSGQIKSGPSGSGVGIITTLLMAVGTLVVVAKAIRYDPNAE 104
BLAST of mRNA_H-canaliculatus_F_contig130.2490.1 vs. uniprot
Match: A0A6G0XHM4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XHM4_9STRA) HSP 1 Score: 66.6 bits (161), Expect = 8.490e-10 Identity = 31/83 (37.35%), Postives = 55/83 (66.27%), Query Frame = 3
Query: 339 TTVHFVKNNGGWMFNLIMAHLLFWLFGFTALLEFGYSDLNQNGSGQIRSGPSGSGVGIISTLLMAVATLVVIVKAIGYDPNRD 587
T V ++++N GW FNL+++++LFWL GF + ++GYS N + +G I SG GSGV +I+ +LM + +V + + + ++D
Sbjct: 7 TVVGYIQDNVGWGFNLVVSNILFWLTGFPTVRDYGYSSENYDENGGIPSGGEGSGVFVITLVLMVICYIVYFGRMVTFLTSKD 89
BLAST of mRNA_H-canaliculatus_F_contig130.2490.1 vs. uniprot
Match: A0A6U4K512_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4K512_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 1.450e-9 Identity = 34/76 (44.74%), Postives = 50/76 (65.79%), Query Frame = 3
Query: 360 NNGGWMFNLIMAHLLFWLFGFTALLEFGYSDLNQN-------GSGQIRSGPSGSGVGIISTLLMAVATLVVIVKAI 566
+NGGW ++ H+LFW++GFTA+ EFGY+D N+ G+G + SGPSGSGV +IS L+ TL+ I + +
Sbjct: 40 SNGGWTMLFVLGHILFWVYGFTAINEFGYTDSNKYDEGPTDLGTGGVASGPSGSGVFMISLFLVIPITLIYIKQGV 115
BLAST of mRNA_H-canaliculatus_F_contig130.2490.1 vs. uniprot
Match: A0A1V9ZXZ5_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZXZ5_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 1.580e-9 Identity = 33/83 (39.76%), Postives = 51/83 (61.45%), Query Frame = 3
Query: 351 FVKNNGGWMFNLIMAHLLFWLFGFTALLEFGYSDLNQNGSGQIRSGPSGSGVGIISTLLMAVATLVVIVKAIGY----DPNRD 587
++ NN GW FNL+ ++LLFWL GF + ++GYS N + G I SG GSGV I++ +LM + ++ + I Y +P+ D
Sbjct: 11 YISNNVGWAFNLLCSNLLFWLAGFPTVQKYGYSSTNYDEYGGIPSGGEGSGVFIVTLVLMCLCYIIYFSRMIAYLQSDEPHHD 93
BLAST of mRNA_H-canaliculatus_F_contig130.2490.1 vs. uniprot
Match: A0A024T7R1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024T7R1_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 1.810e-9 Identity = 33/70 (47.14%), Postives = 48/70 (68.57%), Query Frame = 3
Query: 339 TTVHFVKNNGGWMFNLIMAHLLFWLFGFTALLEFGYSDLNQNGSGQIRSGPSGSGVGIISTLLMAVATLV 548
T V FV +N GW FNL+++++LFWL GF ++GYS+++ N G I SG GSGV +I+ +LM + LV
Sbjct: 12 TVVAFVLDNTGWGFNLVVSNILFWLTGFPIYRDYGYSNVHYNEKGGIPSGGEGSGVFVITLVLMLICYLV 81
BLAST of mRNA_H-canaliculatus_F_contig130.2490.1 vs. uniprot
Match: A0A7S2KAR8_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KAR8_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 1.860e-9 Identity = 33/75 (44.00%), Postives = 49/75 (65.33%), Query Frame = 3
Query: 351 FVKNNGGWMFNLIMAHLLFWLFGFTALLEFGYSDLNQNGSGQIRSGPSGSGVGIISTLLMAVATLVVIVKAIGYD 575
F+K+ GW N +AH+LFWL+GF L E+GYS+ G I SGP GSG GI++ L++ V +LV + K + ++
Sbjct: 10 FLKSQPGWALNFTLAHVLFWLYGFPDLSEYGYSNTFSE-QGNIPSGPLGSGGGIVTLLIVCVMSLVWLQKLVSHE 83
BLAST of mRNA_H-canaliculatus_F_contig130.2490.1 vs. uniprot
Match: A0A397AWI6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397AWI6_9STRA) HSP 1 Score: 65.5 bits (158), Expect = 2.550e-9 Identity = 31/78 (39.74%), Postives = 52/78 (66.67%), Query Frame = 3
Query: 339 TTVHFVKNNGGWMFNLIMAHLLFWLFGFTALLEFGYSDLNQNGSGQIRSGPSGSGVGIISTLLMAVATLVVIVKAIGY 572
T + ++++N GW FNL+++++LFWL GF ++GYS+++ N G I SG GSGV +I+ +LM + LV + I +
Sbjct: 13 TVLAYIQDNTGWGFNLVVSNILFWLTGFPIYRDYGYSNVHYNEKGGIASGGEGSGVFVITLVLMLICYLVYFGRMISF 90
BLAST of mRNA_H-canaliculatus_F_contig130.2490.1 vs. uniprot
Match: A0A485KR65_9STRA (Aste57867_10737 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KR65_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 5.660e-9 Identity = 32/70 (45.71%), Postives = 48/70 (68.57%), Query Frame = 3
Query: 339 TTVHFVKNNGGWMFNLIMAHLLFWLFGFTALLEFGYSDLNQNGSGQIRSGPSGSGVGIISTLLMAVATLV 548
T + ++ +N GW FNLI++++LFWL GF + ++GYS N + +G I SG GSGV +I+ +LM V LV
Sbjct: 9 TVLGYILDNQGWGFNLIISNILFWLTGFPTVRDYGYSSTNYDENGGIPSGGEGSGVFVITLVLMIVCYLV 78
BLAST of mRNA_H-canaliculatus_F_contig130.2490.1 vs. uniprot
Match: A0A425CSI0_9STRA (YTH domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A425CSI0_9STRA) HSP 1 Score: 65.5 bits (158), Expect = 1.220e-8 Identity = 31/78 (39.74%), Postives = 52/78 (66.67%), Query Frame = 3
Query: 339 TTVHFVKNNGGWMFNLIMAHLLFWLFGFTALLEFGYSDLNQNGSGQIRSGPSGSGVGIISTLLMAVATLVVIVKAIGY 572
T + ++++N GW FNL+++++LFWL GF ++GYS+++ N G I SG GSGV +I+ +LM + LV + I +
Sbjct: 76 TVLAYIQDNTGWGFNLVVSNILFWLTGFPIYRDYGYSNVHYNEKGGIASGGEGSGVFVITLVLMLICYLVYFGRMISF 153
BLAST of mRNA_H-canaliculatus_F_contig130.2490.1 vs. uniprot
Match: T0RXX1_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0RXX1_SAPDV) HSP 1 Score: 62.4 bits (150), Expect = 2.690e-8 Identity = 34/92 (36.96%), Postives = 54/92 (58.70%), Query Frame = 3
Query: 324 EGFGPTTVHFVKNNGGWMFNLIMAHLLFWLFGFTALLEFGYSDLNQNGSGQIRSGPSGSGVGIISTLLMAVATLVVIVKAIGY----DPNRD 587
+G T ++ +N GW FNLI +++LFWL GF + ++GYS N + G I SG GSGV I++ +LM + +V + Y +P++D
Sbjct: 3 KGAKRTVGKYINSNYGWAFNLIASNILFWLAGFPTVQKYGYSSDNYDIYGGIPSGGEGSGVFIVTLVLMCICYIVYFGRMAAYLLSDEPHKD 94 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig130.2490.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig130.2490.1 >prot_H-canaliculatus_F_contig130.2490.1 ID=prot_H-canaliculatus_F_contig130.2490.1|Name=mRNA_H-canaliculatus_F_contig130.2490.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=105bp MESSLTQSQRDALKVEGFGPTTVHFVKNNGGWMFNLIMAHLLFWLFGFTAback to top mRNA from alignment at H-canaliculatus_F_contig130:12975..21185+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig130.2490.1 ID=mRNA_H-canaliculatus_F_contig130.2490.1|Name=mRNA_H-canaliculatus_F_contig130.2490.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=8211bp|location=Sequence derived from alignment at H-canaliculatus_F_contig130:12975..21185+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig130:12975..21185+ >mRNA_H-canaliculatus_F_contig130.2490.1 ID=mRNA_H-canaliculatus_F_contig130.2490.1|Name=mRNA_H-canaliculatus_F_contig130.2490.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=630bp|location=Sequence derived from alignment at H-canaliculatus_F_contig130:12975..21185+ (Hapterophycus canaliculatus Oshoro5f female)back to top |