mRNA_H-canaliculatus_F_contig12999.2476.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig12999.2476.1 vs. uniprot
Match: D7G0S9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S9_ECTSI) HSP 1 Score: 256 bits (654), Expect = 2.150e-76 Identity = 136/148 (91.89%), Postives = 145/148 (97.97%), Query Frame = 1
Query: 1 QDPSSKSLVFSQFNSSLEWLKRTLPKRGFQFRTLTGSMTRSQRTAALNAFAKDPPTTVFLLSVRSGAVGINLTQANNVFLLEPLLNLALEKQAIGRVYRLGQARPVTVTKLVLKDSIETRILELQKKQASQGSASAAIGAPSSSSSNG 444
+DP+SKSLVFSQFNSSLEWLKRTLPKRGFQFRTLTG+M+R+QRTAAL AFAKDPPTTVFLLSVRSGAVGINLTQANNVFLLEPLLNLALEKQAIGRVYRLGQ RPVTVTKLVLKDSIETRIL LQKKQA++GSASAA+GAPSSSSS+G
Sbjct: 1114 KDPTSKSLVFSQFNSSLEWLKRTLPKRGFQFRTLTGNMSRTQRTAALTAFAKDPPTTVFLLSVRSGAVGINLTQANNVFLLEPLLNLALEKQAIGRVYRLGQTRPVTVTKLVLKDSIETRILALQKKQATEGSASAAVGAPSSSSSDG 1261
BLAST of mRNA_H-canaliculatus_F_contig12999.2476.1 vs. uniprot
Match: A0A6H5KW09_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW09_9PHAE) HSP 1 Score: 247 bits (631), Expect = 3.260e-73 Identity = 130/142 (91.55%), Postives = 138/142 (97.18%), Query Frame = 1
Query: 1 QDPSSKSLVFSQFNSSLEWLKRTLPKRGFQFRTLTGSMTRSQRTAALNAFAKDPPTTVFLLSVRSGAVGINLTQANNVFLLEPLLNLALEKQAIGRVYRLGQARPVTVTKLVLKDSIETRILELQKKQASQGSASAAIGAPS 426
+DP+SKSLVFSQFNSSLEWLKRTLPKRGFQFRTLTGSM+R+QRTAAL AFAKDPPTTVFLLSVRSGAVGINLTQANNVFLLEPLLNLALEKQA+GRVYRLGQ RPVTVTKLVLKDSIETRIL LQKKQA++GSASAA+GA S
Sbjct: 1150 KDPTSKSLVFSQFNSSLEWLKRTLPKRGFQFRTLTGSMSRTQRTAALTAFAKDPPTTVFLLSVRSGAVGINLTQANNVFLLEPLLNLALEKQAVGRVYRLGQTRPVTVTKLVLKDSIETRILALQKKQATEGSASAAVGAGS 1291
BLAST of mRNA_H-canaliculatus_F_contig12999.2476.1 vs. uniprot
Match: A0A7S0GC86_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GC86_9STRA) HSP 1 Score: 168 bits (425), Expect = 9.270e-50 Identity = 83/130 (63.85%), Postives = 107/130 (82.31%), Query Frame = 1
Query: 4 DPSSKSLVFSQFNSSLEWLKRTLPKRGFQFRTLTGSMTRSQRTAALNAFAKDPPTTVFLLSVRSGAVGINLTQANNVFLLEPLLNLALEKQAIGRVYRLGQARPVTVTKLVLKDSIETRILELQKKQASQ 393
+P+SKSLVFSQF S+L+W++ LPKRGF FRTL+G M+ +R AL F DPPTTVFLLS+RSGAVGINLTQAN VF++EP LN ALE QAIGRV+RLGQ RPV V +L+++DSI+TR+++ +++ SQ
Sbjct: 55 EPNSKSLVFSQFTSTLKWMQEELPKRGFSFRTLSGDMSMPKRAQALREFQSDPPTTVFLLSMRSGAVGINLTQANRVFIMEPALNPALEAQAIGRVHRLGQNRPVEVIRLIIEDSIDTRLMKYLERKYSQ 184
BLAST of mRNA_H-canaliculatus_F_contig12999.2476.1 vs. uniprot
Match: A0A7S2CG02_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CG02_9STRA) HSP 1 Score: 159 bits (403), Expect = 4.200e-47 Identity = 84/145 (57.93%), Postives = 110/145 (75.86%), Query Frame = 1
Query: 1 QDPSSKSLVFSQFNSSLEWLKRTLPKRGFQFRTLTGSMTRSQRTAALNAFAKDPPTTVFLLSVRSGAVGINLTQANNVFLLEPLLNLALEKQAIGRVYRLGQARPVTVTKLVLKDSIETRILELQKKQASQGSASAAIGAPSSSS 435
+D +SK L+FSQF ++L WL++ LP G FRTLTG MT+ QR AL F +DPPTTVFLLSVR+GAVGINLTQAN+VF+LEP+LN ALE QA+GRV+R+GQ R V VTK V+++S+E R+L L Q S S++ +P++ S
Sbjct: 24 KDATSKCLIFSQFQATLTWLQQMLPAHGCSFRTLTGKMTQKQRARALRDFQEDPPTTVFLLSVRAGAVGINLTQANHVFILEPILNPALELQAVGRVHRMGQQRHVYVTKFVMQNSVEERMLNLLNLQTSPEKTSSSGSSPTNGS 168
BLAST of mRNA_H-canaliculatus_F_contig12999.2476.1 vs. uniprot
Match: A0A1E7F8K5_9STRA (p-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F8K5_9STRA) HSP 1 Score: 161 bits (407), Expect = 8.490e-46 Identity = 83/127 (65.35%), Postives = 102/127 (80.31%), Query Frame = 1
Query: 4 DPSSKSLVFSQFNSSLEWLKRTLPKRGFQFRTLTGSMTRSQRTAALNAFAKDPPTTVFLLSVRSGAVGINLTQANNVFLLEPLLNLALEKQAIGRVYRLGQARPVTVTKLVLKDSIETRILELQKKQ 384
D SSKSLVFSQFNS+LE+L+ LPK GFQFRTL+GSM+ QR AL F DPPTTVFLLS+R+GAVGINLTQAN VFL+EP N ALE QAIGRV+RLGQ R V + +LV+K+S E R+++ +++
Sbjct: 84 DVSSKSLVFSQFNSTLEYLQTELPKHGFQFRTLSGSMSMKQRAKALRDFQNDPPTTVFLLSMRAGAVGINLTQANRVFLMEPSFNPALEAQAIGRVHRLGQKREVNILRLVIKNSFEDRMMKFLRQK 210
BLAST of mRNA_H-canaliculatus_F_contig12999.2476.1 vs. uniprot
Match: A0A7J7PDI8_9CHLO (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7PDI8_9CHLO) HSP 1 Score: 154 bits (388), Expect = 2.710e-45 Identity = 77/115 (66.96%), Postives = 95/115 (82.61%), Query Frame = 1
Query: 4 DPSSKSLVFSQFNSSLEWLKRTLPKRGFQFRTLTGSMTRSQRTAALNAFAKDPPTTVFLLSVRSGAVGINLTQANNVFLLEPLLNLALEKQAIGRVYRLGQARPVTVTKLVLKDS 348
DPSSK+LVFSQ+NS+LEWL+R LP+ GF FRT+TGSM + +R A+ AF DPPTTVFLLS+RSGAVGINLT A++V+LLEP LN ALE+QAIGR +R+GQ R VTV + +K S
Sbjct: 5 DPSSKALVFSQYNSTLEWLQRRLPEEGFSFRTITGSMAQRKRARAIEAFQSDPPTTVFLLSMRSGAVGINLTAASHVYLLEPCLNPALEEQAIGRAWRMGQQRKVTVKRFYVKVS 119
BLAST of mRNA_H-canaliculatus_F_contig12999.2476.1 vs. uniprot
Match: A0A7S2UI45_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UI45_9STRA) HSP 1 Score: 157 bits (397), Expect = 4.780e-45 Identity = 75/124 (60.48%), Postives = 98/124 (79.03%), Query Frame = 1
Query: 1 QDPSSKSLVFSQFNSSLEWLKRTLPKRGFQFRTLTGSMTRSQRTAALNAFAKDPPTTVFLLSVRSGAVGINLTQANNVFLLEPLLNLALEKQAIGRVYRLGQARPVTVTKLVLKDSIETRILEL 372
++P +KSLVFSQF S+L W++ LPK GFQFRTL+G M S+R AL F DPPTT+FLLS+R+GA GINLTQAN VFL+EP +N ALE QAIGRVYRLGQ + V + ++++ +S+ETR+ +L
Sbjct: 89 EEPEAKSLVFSQFRSTLSWMQEELPKHGFQFRTLSGDMPMSKRACALRDFQNDPPTTIFLLSIRAGACGINLTQANRVFLMEPAMNPALEAQAIGRVYRLGQRKNVEIVRMLMTNSVETRLTKL 212
BLAST of mRNA_H-canaliculatus_F_contig12999.2476.1 vs. uniprot
Match: A0A383VRJ5_TETOB (Uncharacterized protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VRJ5_TETOB) HSP 1 Score: 166 bits (420), Expect = 7.050e-45 Identity = 87/140 (62.14%), Postives = 110/140 (78.57%), Query Frame = 1
Query: 4 DPSSKSLVFSQFNSSLEWLKRTLPKRGFQFRTLTGSMTRSQRTAALNAFAKDPPTTVFLLSVRSGAVGINLTQANNVFLLEPLLNLALEKQAIGRVYRLGQARPVTVTKLVLKDSIETRILELQKKQASQGSASAAIGAP 423
DPSSK+LVFSQ+NS+LEWL+R LPK GF FRT+TGSM + R A+ AF DPPTTVFLLS+RSGAVGINLT A++VFLLEP LN ALE+QAIGR +R+GQ R VTV + +K S+E RI+++++ + QG A+ AP
Sbjct: 605 DPSSKALVFSQYNSTLEWLQRRLPKEGFSFRTITGSMAQRARAKAIEAFQSDPPTTVFLLSMRSGAVGINLTAASHVFLLEPCLNPALEEQAIGRAWRMGQQRKVTVKRFYVKGSVEERIMDVRRIR--QGHAAPTAPAP 742
BLAST of mRNA_H-canaliculatus_F_contig12999.2476.1 vs. uniprot
Match: A0A383VTQ3_TETOB (Uncharacterized protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VTQ3_TETOB) HSP 1 Score: 166 bits (420), Expect = 9.060e-45 Identity = 87/140 (62.14%), Postives = 110/140 (78.57%), Query Frame = 1
Query: 4 DPSSKSLVFSQFNSSLEWLKRTLPKRGFQFRTLTGSMTRSQRTAALNAFAKDPPTTVFLLSVRSGAVGINLTQANNVFLLEPLLNLALEKQAIGRVYRLGQARPVTVTKLVLKDSIETRILELQKKQASQGSASAAIGAP 423
DPSSK+LVFSQ+NS+LEWL+R LPK GF FRT+TGSM + R A+ AF DPPTTVFLLS+RSGAVGINLT A++VFLLEP LN ALE+QAIGR +R+GQ R VTV + +K S+E RI+++++ + QG A+ AP
Sbjct: 1525 DPSSKALVFSQYNSTLEWLQRRLPKEGFSFRTITGSMAQRARAKAIEAFQSDPPTTVFLLSMRSGAVGINLTAASHVFLLEPCLNPALEEQAIGRAWRMGQQRKVTVKRFYVKGSVEERIMDVRRIR--QGHAAPTAPAP 1662
BLAST of mRNA_H-canaliculatus_F_contig12999.2476.1 vs. uniprot
Match: A0A383VY86_TETOB (Uncharacterized protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VY86_TETOB) HSP 1 Score: 164 bits (416), Expect = 3.080e-44 Identity = 84/129 (65.12%), Postives = 105/129 (81.40%), Query Frame = 1
Query: 4 DPSSKSLVFSQFNSSLEWLKRTLPKRGFQFRTLTGSMTRSQRTAALNAFAKDPPTTVFLLSVRSGAVGINLTQANNVFLLEPLLNLALEKQAIGRVYRLGQARPVTVTKLVLKDSIETRILELQKKQAS 390
DPSSK+LVF+Q+NS+LEWLK+ LP GF FR+++GSM +QRTAA+ F KDPPTTVFLLSVRSGA GINLT AN+VFLLEP LN ALE+QAIGR +R+GQ R V V +L +K SIE +I++L + + S
Sbjct: 912 DPSSKALVFTQYNSTLEWLKKALPAAGFGFRSISGSMPLNQRTAAIKNFQKDPPTTVFLLSVRSGACGINLTAANHVFLLEPCLNPALEEQAIGRAWRMGQRREVVVKRLFVKGSIEEKIMQLAEARRS 1040 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12999.2476.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig12999.2476.1 >prot_H-canaliculatus_F_contig12999.2476.1 ID=prot_H-canaliculatus_F_contig12999.2476.1|Name=mRNA_H-canaliculatus_F_contig12999.2476.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=149bp QDPSSKSLVFSQFNSSLEWLKRTLPKRGFQFRTLTGSMTRSQRTAALNAFback to top mRNA from alignment at H-canaliculatus_F_contig12999:124..2882+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig12999.2476.1 ID=mRNA_H-canaliculatus_F_contig12999.2476.1|Name=mRNA_H-canaliculatus_F_contig12999.2476.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2759bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12999:124..2882+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig12999:124..2882+ >mRNA_H-canaliculatus_F_contig12999.2476.1 ID=mRNA_H-canaliculatus_F_contig12999.2476.1|Name=mRNA_H-canaliculatus_F_contig12999.2476.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=894bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12999:124..2882+ (Hapterophycus canaliculatus Oshoro5f female)back to top |