mRNA_H-canaliculatus_F_contig1299.2473.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1299.2473.1 vs. uniprot
Match: D8LK68_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK68_ECTSI) HSP 1 Score: 811 bits (2095), Expect = 3.860e-255 Identity = 655/2182 (30.02%), Postives = 861/2182 (39.46%), Query Frame = 2
Query: 92 SSLDRSILCELFEKTGGVESWRKKDGWATARPMSEWYGVETNSEGRVISLDLAYNSLEGQLPSGLGELKFLKTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLGAEAKTTLGTADSDAG-KMGHLENCILFPDLNAKGWESGDVDEECHHWTSGPLKASQELRHVSFWWKDQGWGNRKGMLYLSLDPHPSIEQEESDHKKKGHRQLTPEPAEHDWTRAVVKVDPEDPLRRLAQTGDRYRLSYLAGGGGGHEIRVAGFKLHLGAAGGHRGDEIFSSVLWKLDLSGNQLEGSIPMEIANLSGLELLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTELPKDLASEWASMKLHETR-LGLFLDGNPWVRPPSTVLSQGLDAVEKWWRDIANFGEGTSNKLKVVLVGLAKAGKTTVVRHFTGRQPAEKRTVGVEVTEWKPREELPLSVSLWDFAGQSEYYSSHQIFLTQGALFLLVVDVFELSRDPP--GLADPRGAIFRWLDILHDRVPGAVVGLVGTHGDKFFHQASPCSSSSSSSSC--------------------------------------------------------------------------GLDDSXXXXXXXXXXXXXXXSP--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GQQQLEDAEKRFLDLVRSYQAERAKEDKVLRNYAQSRAEGELSSRKASKDAEEGRQRASAGLRRTPGSFRMPPARVMKTTGKPLSIPGKIFRTSVDRRNNVAELKDWIVEAATEKEDFSFPSVGAIVPPAWMDAIAAVEALGQERGNPFVMWDDALKSFQSHYKNKS--------NKPPGDIEPKSILIQALAHREAEGGILLSMEDRSSPAEGDVIHLDPRWLMELVKRIIDHNLVDERKQGRIPEELVAYEETRGPTPGGFSRLYKAHKSFIRQGRLDQEYLRFLWVHRKLD-EGNYEGVDLN-GCFKNMLDAMIRYLFIYRAPEPSNNGQEVYVVPARLPLYGKENVLAENIGLGEAVEGIKAWFIRTHLPSGIIGRFLAFTAESIVSSGACWQHGAHIKWKKDAHTYDVLLYETTENK----GTRTWPAISVFVKCERSKASDVLAELEEKLKSLIRDNVHGYPGVCLPAFDDIRGLTSNELQEHLIPYLDTQFSNLTKILENISNYSVRIFKNSFPSYFDPEKQPYPRLVVLKPVAED--QEASTGEHDEGTIHSREMWNRWARLWKSRRAGDSC--YLVFLCAYDFSEIPCGPEGKGYLIQNPGELVQSMLPLLQGALWLLRVGIKIVSAIDLPLNDLSSALVQSAFGEFEEHLPRDFDADPTGFNVDATWEEGQSGRFKELHEPAYEKLCEFMKKEEGSKGACPC-----LHRFLCGKTSTQPKNWRDEMEQVKHGNGEWAWVRRS 4060
+S DR +L L TGG SW W T P+ +W+GV+ +G V+ LDLA N+L G +P+ LG+LK LKTL XXXXXXXXXXXXXX QLG +T + +DAG + GH PDL A+G S D ++E HW+S PL+ ELR+VSF W+DQGWGNRKG L+LSLDP S +Q+ S + K HRQL P+PAEH WT V+++DP+DPLRRLA GDRYRLS++AGGGGGH ++ F LH AGG GDE++S VLWK+DLS NQL G+IP +++NL L +L+ XXXXXXXXXXXXXXX + LP DL ++WA + R +G+ ++GNPWVRPP L++GL + +WW IA FGEGTS+KLK+VLVGLA+AGKTT+VRHFTG PA+KRT+GVE++EWKP + LPL+VSLWDF+GQS+Y++SHQIFLT+GALFLLVVD+FEL RD G+ DPRGAI+RWL ILH+RVPGAVV LVGTHGDKFF + P S S+ GLDD GQ+QL AEKRF LVR YQ ++AKE K LS AS + ++ QR S PL + ++F S+ N + L DWI+ A EK FSFP+V I+P AW+DAIAAVEAL +E+G P+V+W DA+++FQ +++ K NKP D + + L +A+ HREAEGG++LS+ D SSPA+ D+IH+DPRWL+ELV+R+ DHNLVD++KQ +I +EL+ Y+ TR T G+ L + H FIRQGRL+++YLRFLWVHRKL+ EG+Y G L+ F +M+D MI+YLFIY + +N ++ ++VPARLP +G +N+L E+IGLGE V G AWF+R+H P+GIIGRFLAFT+ +SG CWQHGAHI+WKKD++ +DVLL ETT K G T+PAI++ VK + ++A VL E+ E+L SL++DN+HGYPG+ LP F+++ S++ Q H YL TQ L KILE+ SVR+F+ +FPSY DP + PYPRLV+LKPV QE E G I R W+RW L +S G SC LVFLC DFSEIPCGP+GKG+ + NPG L ++ PLLQGALWL+++ + V+++DLPL+D+ A + + E E A P+ F+ AT +EGQ FKELH PAY+ LC+FM KEE C +R + +WR ME +K+G G ++WVR+S
Sbjct: 2 ASTDRDVLLVLHRSTGGA-SWTNNANWDTDAPIGDWHGVKVKDDGHVVKLDLASNNLRGDIPAILGKLKLLKTLILSDNTLTAKPGGAQPQLLWSALETRTSKGSXXXXXXXXXXXXXXDLGSNELSGHIPDRLG---QLGVSIRTNVEENFTDAGNRSGHQ---TFVPDLYAEGIGS-DPEDERDHWSSEPLEPLHELRYVSFLWRDQGWGNRKGTLFLSLDPG-STDQQCSTQEPKEHRQLMPDPAEHKWTHEVMEIDPKDPLRRLACAGDRYRLSFIAGGGGGHILQARRFTLHFSVAGGSCGDELYSRVLWKIDLSNNQLTGNIPQDLSNLRDLGVLRLGXXXXXXXXXXXXXXXERLFDVDLTNNELSVLPMDLTAKWALAVQDDNRKVGVSVNGNPWVRPPRAFLARGLVSAGRWWDGIARFGEGTSSKLKMVLVGLAEAGKTTIVRHFTGGDPADKRTIGVELSEWKPNKNLPLAVSLWDFSGQSDYHASHQIFLTEGALFLLVVDLFELGRDEKSAGIPDPRGAIYRWLVILHERVPGAVVALVGTHGDKFFPRPPPSSESAGDEDRENRIDVLNTLLKILAGLLRQERAKLGGQLSADKHLGNLLQLVRTQVEPRLSADDLXXXXXXXXXXXXXXXWADEGLDDLMRLVQTTLVGQHSDEKSKFEXXXXXXXXXXXXXXXADDLCDVLQWVQTRXXXXXXXXXXXXXXXVQLVRTNLQXXXXXXXXXXXXXXXXXXXXXXXXXGGLAYGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGHXXXEGLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLADGLMELFASKMVIQLPADDLGDVLQWLRARLEGHLSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDRADSLVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGLGDLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDADRADGLEELVHSKMEFQLXXXXXXXXXXXXXXXXXXXXSGEGLGDVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADVLVELVHSKLXXXXXXXXXXXXLRWLRARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDVDLAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSAEGLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTDLADGLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRRAEDLDDLVRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXILGDEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLQLSGXXXXXXXXXXXXXXLEDQVVSAEDLDDLVQLMRIYLQDQLPAXXXXXXXXXXXXXXXXXXXGPRYAEEIKNGQRQLYKAEKRFRTLVRQYQEDKAKELK-------------LSCGNASAEKDDSFQRGST---------------------HPLILHPRVFCASLGLDNRIGRLSDWIIGVAPEKISFSFPAVATILPAAWVDAIAAVEALHKEKGTPYVLWGDAVRAFQRYFQEKHKEEGKEERNKPLSDEDAATNLKEAMKHREAEGGVILSLRDESSPAQSDMIHVDPRWLIELVRRVTDHNLVDKKKQNKILQELLEYDRTRPDTLSGYKNLCETHACFIRQGRLNRDYLRFLWVHRKLEVEGDYAGAQLDKDAFDSMVDTMIKYLFIYPSHGECSNAEDCHIVPARLPEHGNDNILEESIGLGEVVVGKTAWFLRSHAPTGIIGRFLAFTSSRFEASGKCWQHGAHIQWKKDSNEHDVLLCETTIEKDIIPGQSTFPAIAICVKGKTAEAKGVLREVGEQLLSLLQDNIHGYPGLRLPIFEELNITQSDQFQVHFERYLATQ---LAKILEDTRRESVRMFRAAFPSYGDPVELPYPRLVLLKPVETTSIQETQAEESVNGAIQLRRTWDRWIDLCRS---GGSCDFVLVFLCERDFSEIPCGPQGKGFRVHNPGSLFNTLKPLLQGALWLVKIAVGTVASVDLPLHDVLEAFLHATAAEVLE-------AAPSQFSPSATLDEGQQEGFKELHGPAYKALCDFMTKEEFGPEEARCESCLPWYRPRVHEPIPSEFDWRSHMEMIKNGIG-YSWVRKS 2126
BLAST of mRNA_H-canaliculatus_F_contig1299.2473.1 vs. uniprot
Match: A0A6H5JR01_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR01_9PHAE) HSP 1 Score: 529 bits (1362), Expect = 8.570e-166 Identity = 301/670 (44.93%), Postives = 409/670 (61.04%), Query Frame = 2
Query: 2117 PLSIPGKIFRTSVDRRNNVAELKDWIVEAATEKEDFSFPSVGAIVPPAWMDAIAAVEALGQERGNPFVMWDDALKSFQSHYKNKS--------NKPPGDIEPKSILIQALAHREAEGGILLSMEDRSSPAEGDVIHLDPRWLMELVKRIIDHNLVDERKQGRIPEELVAYEETRGPTPGGFSRLYKAHKSFIRQGRLDQEYLRFLWVHRKLD-EGNYEGVDL-NGCFKNMLDAMIRYLFIYRAPEPSNNGQEVYVVPARLPLYGKENVLAENIGLGEAVEGIKAWFIRTHLPSGIIGRFLAFTAESIVSSGACWQHGAHIKWKKDAHTYDVLLYETTENK----GTRTWPAISVFVKCERSKASDVLAELEEKLKSLIRDNVHGYPGVCLPAFDDIRGLTSNELQEHLIPYLDTQFSNLTKILENISNYSVRIFKNSFPSYFDPEKQPYPRLVVLKPVAEDQEASTG-EHDEGTIHSREMWNRWARLWKSRRAGDSC--YLVFLCAYDFSEIPCGPEGKGYLIQNPGELVQSMLPLLQGALWLLRVGIKIVSAIDLPLNDLSSALVQSAFGEFEEHLPRDFDADPTGFNVDATWEEGQSGRFKELHEPAYEKLCEFMKKEE-GSKGA--CPCL--HRFLCGKTSTQPKNWRDEMEQVKHGNGEWAWVRRS 4060
PL + ++FR S+ N V L DWI++ +TEK FSFP+V I+P AW V+W DA+K+FQ +++ K NKP D E S L +A+ HREAEGG++LS+ + SSPA+ D+IH+DPRWL++LV+R+ DHNLVD++ + I +EL+ Y TR T G+ L + H FIRQGRL+++YLRFLWVHRKL+ EG Y GV L N F +M+D MI+YLFIY + + + Y+VPARLP GK+NVL E+IGL E V G AWF+R+H P+GIIG FLAFT+ +SG CWQHGAHI+WKKD++ +D+LL ETT K G T PAI++ VK + ++A VL E+ E+L SL++D +H H YL T+ L ILE+ SVR+F+ +FPSY + + YPRLV+LKPV T E G R W+RW L S G SC LV LC DFSEIPCGP+GKG+ + NPG L ++ PLLQGALWL+++ + V+++ LPL+D+ A + + E E A P+ F+ AT +EGQ FKELH PAY+ LC+FM+KEE G + A CPCL HR + +WR M ++K+G G ++WVR+S
Sbjct: 42 PLILHPRVFRASLGLDNRVNRLSDWIIDVSTEKISFSFPAVATILPSAW------------------VLWGDAVKAFQRYFQEKHKEEREDERNKPLSDEEASSNLKEAMKHREAEGGVILSLREESSPAQSDMIHVDPRWLIDLVRRVTDHNLVDKKNEHEILKELLEYGRTRPDTLSGYKNLCETHTCFIRQGRLNRKYLRFLWVHRKLEVEGGYAGVQLENDTFDSMVDTMIKYLFIYPSHGECSKAEGFYIVPARLPEIGKDNVLEESIGLDEVVVGKTAWFLRSHAPTGIIGCFLAFTSSRFEASGECWQHGAHIQWKKDSNEHDMLLCETTIEKDIIPGPGTLPAIAICVKGKTAEAKGVLREVGEQLLSLLKDVIH----------------------VHFERYLATK---LATILEDTRRESVRMFRAAFPSYGEHVELLYPRLVLLKPVETTSIQETQVESVSGAKKLRRTWDRWIDLCWS---GGSCDFVLVILCERDFSEIPCGPQGKGFRVHNPGSLFNTLKPLLQGALWLVKIAVGTVASVYLPLHDVLEAFLHATAAEVLE-------AAPSQFSPSATLDEGQQEGFKELHGPAYKALCDFMRKEEFGPEEAQCCPCLPWHRPRVHEPILSEFDWRSHMYKIKNGVG-YSWVRKS 657
BLAST of mRNA_H-canaliculatus_F_contig1299.2473.1 vs. uniprot
Match: D8LKS5_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKS5_ECTSI) HSP 1 Score: 516 bits (1330), Expect = 4.680e-155 Identity = 355/983 (36.11%), Postives = 522/983 (53.10%), Query Frame = 2
Query: 1286 NPWVRPPSTVLSQGLDAVEKWWRDIANFGEGTSNKLKVVLVGLAKAGKTTVVRHFTGRQPAEK--RTVGVEVT-EWKPREELPLSVSLWDFAGQSEYYSSHQIFLTQGALFLLVVDVFELSRD----PPGLADPRGAIFRWLDILHDRVPGAVVGLVGTHGDKFFHQASPCSSSSSSSSCGLDDSXXXXXXXXXXXXXXXSPGQQQLEDAEKRFLDLVRS----YQAERAKEDKVLRNYAQSRAEGELSSRKASK--DAEEGRQRASAGLRRTPGSFRMPP-ARVMKTTGKPLSIPGKIFRTSVDRRNNVAELKDWIVEAATEKE---DFSFPSVGAIVPPAWMDAIAAVEALGQERGN-PFVMWDDALKSFQSHYKNKSNKPPGDIEPKSILIQALAHREAEGGILLSMEDRSSPAEGDVIHLDPRWLMELVKRIIDHNLVDE--RKQGRIPEELVAYEETRGPTPGGFSRLYKAHKSFIRQGRLDQEYLRFLWVHRKLDEGNYEGVDLNGC-FKNMLDAMIRYLFIYRAPEPSNNGQEVYVVPARLPLYGKENVLAENIGLGEAVEGIKAWFIRTHLPSGIIGRFLAFTAESIVSSGACWQHGAHIKWKKDAHTYDVLLYETTENKGTRT-----WPAISVFVKCERSKASDVLAELEEKLKSLIRDNVHGYPGVCLPAFDDIRGLTSNELQEHLIPYLDTQFS-----------------NLTKILENISNYSVRIFKNSFPSYFDPEKQPYPRLVVLKPVAEDQEASTGEHDEGTIHSREMWNRWARLWKSRRAGDSCYLVFLCAYDFSEIPCGPEGKGYLIQNPGELVQSMLPLLQGALWLLRVGIKIVSAIDLPLNDLSSALVQSAFGEFEEHLPRDFDADPTG----FNVDATWEEGQSGRFKELHEPAYEKLCEFMKKEEGSKGAC-----PCLHRFLCGKTSTQPKNWRDEMEQVKH-GNGEWAWVRRSNLKSF 4075
NPW RPPSTVL G + WW D+ FGEG SNKLK+VLVGLA AGKTT+VRH TGR ++ RTVG+E+T +WKP +E+PL VS+WDFAGQ++YYSSHQ+FLT+GALFLLVVD+ S++ DPR I+ WL++LH RVPGA V LVG+H D Q + EDA + L + R V+ + + +A G S R++ + DAE + LR RM P + + T +PL + G +F+ S+ +V EL+ WIV+AA+ +E F+FP+V V AW++A A++ L +G P V+W A++ F+ + S PP + +L++A+ HREAEGG+LLS+ D S+P D++HLDP WL+ELV+R+ DHNLVD+ +K+G + + L Y + +G + L+ H + R GRL++ YLRFLW+HRK+ EG VDL F++++ M R L +Y A + N VVPARL YG + + L V I+ F + + P GI+GRFLA++A+ + G CWQHGA +K YDV LYE+ + + + +++ ++ +A++VL EL + L+SL+ D+ +GYPG+ P + + L L LD +L + + + ++ + D E+ YPRLV+++P E E T E + R W+RW + S + FLC +D SE+PCGP G+G+ I++P + V+ LPL+Q +LW+LRV + VS +DLPLN + A V + E E + + D + F+ AT + FK+L +YE LC+FM+ E S C PC HR L +WRD M QV++ G AWV ++N K+F
Sbjct: 248 NPWSRPPSTVLESGFERALGWWEDVKRFGEGKSNKLKMVLVGLAGAGKTTIVRHMTGRSVPKRSDRTVGIEITTDWKPGDEVPLQVSVWDFAGQADYYSSHQLFLTKGALFLLVVDLHAFSKEIGSGVDNFTDPRRRIYWWLEMLHMRVPGAAVALVGSHVD-----------------------------------------QMESEDARQAETHLHTGEASWFFRGRVPCSLVVSKFIKDKA-GNASRRQSIRCIDAESTKPMEVDHLR---DDGRMAPRSGSSRFTAEPLVLHGNVFKVSL-APTSVVELRQWIVKAASGRECPTGFNFPAVDQTVSKAWIEAYDAMDVL---KGTAPCVLWSRAVEEFR---RKMSGIPPVAGDAGKVLLRAMQHREAEGGVLLSLADDSAPVASDMLHLDPSWLIELVRRLADHNLVDKDKKKRGSLEQGLRVYAKRQGLAA---APLFDIHNVYCRSGRLNRAYLRFLWMHRKI-EGPGPTVDLTDPEFESIVSTMERLLVMYTARDADN-----LVVPARLQEYGDQRIPDR---LTNMVLKIECSFGQVYPPPGIVGRFLAWSAQQVADYGECWQHGAFFSYKYQYARYDVFLYESEVEEAHQDGTVDMFAGLTLGIQGPPPQAAEVLEELRKSLESLVSDSAYGYPGLVGPMYFRPAEEIESSLLVRLGSVLDXXXXXXXXXXXXXXXXXXXXXSLEETVRKLGGIVTQLLEQDLLPASD-EQSAYPRLVLVRPELETAEDMTHERIQ-----RAGWDRWTKA-LSEMGFHKFRVHFLCGHDLSEVPCGPGGRGFPIKHPKDWVKQWLPLMQVSLWMLRVAVGAVSNVDLPLNKVLGAFVMATGAELLEGVGKVPDRISSAALPVFSEGAT--RAEMDGFKDLRGKSYEGLCKFMRDVESSPPQCLSGCLPC-HRTLA------VVDWRDHMVQVRNPSTGRRAWVLKTNEKAF 1150
BLAST of mRNA_H-canaliculatus_F_contig1299.2473.1 vs. uniprot
Match: A0A6H5JPJ1_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPJ1_9PHAE) HSP 1 Score: 257 bits (657), Expect = 4.750e-66 Identity = 257/950 (27.05%), Postives = 407/950 (42.84%), Query Frame = 2
Query: 1265 LGLFLDGNPWVRPPSTVLSQGLDAVEKWWRDIANFGEGTSNKLKVVLVGLAKAGKTTVVRHFTG---RQP---AEKRTVGVEVTEWK---------PREELPLSVSLWDFAGQSEYYSSHQIFLTQGALFLLVVDVFELSRDPPGLADPRGAIFRWLDILHDRVPGAVVGLVGTHGDKFFHQASPCSSSSSSSSCGLDDSXXXXXXXXXXXXXXXSPGQQQLEDAEKRFLDLVRSYQAERAKEDKVLRNYAQSRAEGELSSRKASKDAEEGRQRASAGLRRTPGSFRMPPARVMKTTGKPLSIPGKIFRTSVDRRNNV--AELKDWIVEAATEKED-FSFPSVGAIVPPAWMDAIAAVEALGQ-----------------------ERGNPFVMWDDALKSFQSHYKNKSNKPPGDIEPKSILIQALAHREAEGGILLSMEDRSSPAEGD--------VIHLDPRWLMELVKRIIDHNLVDERKQGRIPEELVAYEETRGPTPGGFSRLYKAHKSFIRQGRLDQEYLRFLWVHRKLDEGNYEGVDLNGCFK-------NMLDAMIRYLFIYRAPEPSNNGQEVYVVPARLPLYGKENVLAENIGLGEAVEGIKAWFIRT-------HLPSGIIGRFLAFTAESIVSSGACWQHGAHIKWKKDAHTYDVLLYETTENKGTRTWPAISVFVKCERSKASDVLAELEEKLKSLIRDNVHGYPGVCL--------------PAFDDIRGLTSNELQEHLIPYLDTQFSNLTKILENIS------------------NYSVRIFKNSFPSYFD-------------PEKQ-PYPRLV-VLKPVAEDQEASTGEHDEGTIHSREMWNRWARLWKSRRAGDSCYLV-FLCAYDFSEIPCGPEGKGYLIQNPG--ELVQSMLPLLQGALWLLRVGIKIVSAID-LPLNDLSSALVQSA 3772
+ ++ NPW PP+ VL G+ ++ +D+ +FG +SN+LKVVLVGL AGKT+V G +P AE+RTVGVE+ + + R L V LWDFAGQ YY +HQ+FLT GALF+LVVD+F S D D A+ +WLDIL RVPG+VV LVGTH D F S + C D +D V +E K R A+ + G R AG++ S R P R++ + ++ ++ V A+L++ A D +SFPSV + VP + A+A +EA+ + + G PF+++ +AL F KS E + + A+ E +G IL++ D E VIH++P W +L++RI+D L+D +Q ++ E + + +P + L K H F G + + Y++FLW R L+ G F+ M+++++ F++R + ++ Y+VP+ LP + V A+ + LG V G A F R +P G+I R LA+ ++ CW+ G + + + VLLYE + G R+ KA L ++ +L+ L+ D +G+PG+ L D + + EL++H+ + F L + I+ N+ ++ D EK P PRL+ VL+ V+ S H R+M ++ R + CY + FLCAYD + CG +G GY ++ G E +++ LP+++ +LWLLRVGI +V+ D LP++ + L + A
Sbjct: 178 VSIYTAENPWTEPPADVLELGMAYAARFLKDLNDFGRTSSNRLKVVLVGLGNAGKTSVAVRLEGLASSKPLPTAEERTVGVEIRDIQLAPGPANGGSRGNAELDVKLWDFAGQRAYYDTHQMFLTPGALFVLVVDIFAYSEDGHSRED---ALEQWLDILQARVPGSVVLLVGTHSDMF----------DSPADCSKRD-----------------------------IMDRV-------GRECKSARERARQESAGNSD-------------REYAGVQ---DSRRYQPLRIV--------VVDELLALNLTPSGGVTTAQLQEHFEGVAYGVHDGYSFPSVNSEVPEPHLLAVATLEAVRRGATLRGSGGDPAEVVRRLDGEKLDEGQPFILFPEALSLFLEVAGEKSLFGGNATEGEQAFLAAITLHERQGAILVTRADGGGEKEDMKPASEQHLVIHVNPAWFADLIRRIVDVRLLDPAQQEKLAEVI------KRQSPASVAELSKQHGRFFLAGEVSKRYMKFLWKERDLELGPASPSLAAPPFEMSEETITTMVESLLAVRFMFRV----RHNKDHYIVPSCLPDHVGCTVDAKKL-LGLDVGG--AIFSRKLQLGGEQPVPPGLIPRLLAWCSQGDARITTCWKRGVCFAFNRK---HLVLLYEHRKEAG-RSVIECHAMGSAHNEKAGGTLDDVVAELRRLVGDPKYGFPGIWLFFDGGVEHQKATSAGELDKLLSRFAGELKDHM----NVNFKELARKSNVIAGGVERHLRKGQEEMATSFNHQIQQLGQDMSRKLDCIAAVTSKCLLVSVEKDIPCPRLIMVLEDVSPGSALSRLSH-----FRRDMVDKLLRR-EGEGPAPQCYRIRFLCAYDLTAGTCGKDGLGYKVEIQGWQEWLKACLPVIKVSLWLLRVGISVVTRADVLPVDGVIETLEEVA 1027
BLAST of mRNA_H-canaliculatus_F_contig1299.2473.1 vs. uniprot
Match: A0A6H5JSN1_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSN1_9PHAE) HSP 1 Score: 253 bits (647), Expect = 8.530e-66 Identity = 270/932 (28.97%), Postives = 402/932 (43.13%), Query Frame = 2
Query: 1286 NPWVRPPSTVLSQGLDAVEKWWRDIANFGEGTSNKLKVVLVGLAKAGKTTVVRHFTGRQP------AEKRTVGVEVTEWK----PRE-----ELPLSVSLWDFAGQSEYYSSHQIFLTQGALFLLVVDVFELSRDPPGLADPRGAIFRWLDILHDRVPGAVVGLVGTHGDKFFHQASPCSSSSSSSSCGLDDSXXXXXXXXXXXXXXXSPGQQQLEDAEKRFLDLVRSYQAERAKEDKVLRNYAQSRAEGELSSRKASKDAEEGRQRASAGLRRTPGSFRMPPARVMKTTGKPLSIPGKIFRTSVDRRNNV--AELKDWIVEAATEKED-FSFPSVGAIVPPAWMDAIAAVEAL---------GQE---------------RGNPFVMWDDALKSFQSHYKNKSNKPPGDIEPKSILIQALAHREAEGGILLS-------MEDRSSPAEGDVIHLDPRWLMELVKRIIDHNLVDERKQGRIPEELVAYEETRGPTPGGFSRLYKAHKSFIRQGRLDQEYLRFLWVHRKLDEG----------NYEGVDLNGCFKNMLDAMIRYLFIYRAPEPSNNGQEVYVVPARLPLY---GKENVLAENIGLGEAVEGIKAWFIRTH-LPSGIIGRFLAFTAESIVSSGACWQHGAHIKWKKDAHTYDVLLYETTENKGTRTWPAISVFVKCERSKASDVLAELEEKLKSLIRDNVHGYPGVCL-----------PAFDDIRGLTSN---ELQEHLIPYLDTQFSNLTKILENISNY------SVRIFKNSFPSYFD-------------PEKQ-PYPRLVVLKPVAEDQEASTGEHDEGTIHS--REMWNRWARLWKSRRAGDSCYLV-FLCAYDFSEIPCGPEGKGYLIQNPG--ELVQSMLPLLQGALWLLRVGIKIVSAID-LPLNDLSSALVQSA 3772
NPW PP+ VL GL + +D+ +FG +SN+LKVVLVGL AGKT+V G P A++RTVGVE+ + + P L V LWDFAGQ YY +HQ+FLT GALF+LVVD+F S D D A+ +WLDIL RVPG+VV L+GTH D F A CS KR V+ + +N+ R E KA+ D R AG++ + R P RV+ + ++ ++ V AEL++ I A D +SFPSV VP + A+A +EA+ G E G+PFV++ +AL F K E + + A+ E +G ILL+ MED +S E VIH++P W +L++RI+D L+D + +E VA R P P L K H F G L++ Y+RFLW R L+ G D+ +++LD +R++F R E + Y+VP+ LP + + + +G A+ + F+ H +P G+I R LA+ + ACW+ G +K+ VLLYE + R KA L ++ +L L+ D +G+PGV L + + + GL + EL+E + ++ L I + + + + D EK P PRL++ V+ED E D+ + REM ++ L+ + Y + FLCAYD S CG +G GY ++ +Q +P++Q ALW +RVG+ +VS D LP++D+ L + A
Sbjct: 13 NPWTEPPADVLQVGLAYAASFLKDLEDFGRTSSNRLKVVLVGLGNAGKTSVAVRLEGLAPSKPLPSAKERTVGVEIRDIRLGSGPANARSGGNAELDVKLWDFAGQRAYYDTHQMFLTPGALFVLVVDMFAYSEDGHSRED---ALEQWLDILQARVPGSVVLLMGTHSDSFDSPAE-CS---------------------------------------KRVDCFVKGELLP------LYKNFIMKRIGDEC---KAAAD------RGHAGVQ---DNRRYEPLRVV--------VVKELLALNLSPSGGVTTAELREHIEGVAYGVHDGYSFPSVNNEVPEPHLLAVATLEAVRRGVSLRGSGGEPAEVARRLNAGTKVGEGHPFVLFPEALSRFLEVAGEKPMFGGKATEGARVFLAAIKLHEVQGAILLTRADGGGEMEDMASE-EHLVIHMNPAWFADLIRRIVDVRLLD---PAQARQEKVADLIKRQP-PASVGDLSKQHHRFFLAGELNRRYMRFLWKDRDLELGPASPNTAPPLEMSEEDITTIVESLLD--VRFMFRVRQNE------DHYIVPSCLPDHVGCDMDPKKLMELEVGGAIFSRRLEFVGAHSVPPGLIPRLLAWCGQGDERITACWKRGVCFSFKEHL----VLLYEHRD--AGRAVIECHAMGSAHDEKAWRTLEDVVTELGQLVGDAKYGFPGVGLFFVGGGDKQKVSSAETLEGLLTRFTGELKEQINVKVEELGQKLDDIAGGVEKHLRKGQEEMASLREDVSLQLDCIAAVTSECLLVSAEKDIPCPRLIM---VSED---DVPESDQSRLSHFRREMMDQ---LFLGKGQTPQHYRIRFLCAYDLSAATCGEDGLGYKVEIGSWKGWLQKYMPVIQVALWTVRVGVSVVSRADILPVDDVMGKLREVA 847
BLAST of mRNA_H-canaliculatus_F_contig1299.2473.1 vs. uniprot
Match: D7FU35_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU35_ECTSI) HSP 1 Score: 253 bits (647), Expect = 1.080e-64 Identity = 288/1036 (27.80%), Postives = 437/1036 (42.18%), Query Frame = 2
Query: 1280 DGNPWVRPPSTVLSQGLDAVEKWWRDIANFGEGTSNKLKVVLVGLAKAGKTTVVRHFTGRQPA-----EKRTVGVEVTEWK----PREE-----LPLSVSLWDFAGQSEYYSSHQIFLTQGALFLLVVDVFELSRDPPGLADPRGAIFRWLDILHDRVPGAVVGLVGTHGDKFFHQASPCSSSSSSSSCGLDDSXXXXXXXXXXXXXXXSPGQQQLEDAEKRFLDLVRSYQAERAKEDKVLRNYAQSRAEGELSSRKASKDAEEGRQRASAGLRRTPGSFRMPPARV-MKTTGKPLSIPGKIFRTSVDRRNNVAELKDWIVEAATEKED-FSFPSVGAIVPPAWMDAIAAVEAL---------GQER---------GNP-----FVMWDDALKSFQ----SHYKNKSNKPPGDIEPKSILIQALAHREAEGGILLSMED--------------RSSPAEGDVIHLDPRWLMELVKRIIDHNLVDERKQGRIPEELVAYEETRGPTPGGFSRLYKAHKSFIRQGRLDQEYLRFLWVH-RKLDEGNYEGVDLN---GCFKNMLDAMIRYLFIYRAPEPSNNGQEV-----YVVPARLPLYGKENVLAENI---GLGEAVEGIKAWFIRTH-LPSGIIGRFLAFTAESIVSSGACWQHGAHIKWKKDAHTYDVLLYETTENKGTRTWPAISVFVKCE-RSKASD------VLAELEEKLKSLIRDNVHGYPGVCLPAFDDIRGLTSNELQEHLIPYLDTQFSNLTKILENISNYSVRIFKNSFPSYFDPE--KQPYPRLVVLKPVAEDQEASTGEHDEGTIHSREMWNRWARLW--KSRRAGDS-----CYLVFLCAYDFSEIPCGPEGKGYLIQNPGELVQSMLPLLQGALWLLRVGIKIVSAIDLPLNDLSSALVQSAFGEF----EEHLPRDFD--ADPTGFNVDATWEEG----------QSGRFKELHEPAYEKLCEFMKKEE--GSKGACPCLHRFLCGKTSTQPKNWRDEMEQVKHGNGEWAWVRRSNLKSF 4075
+ NPW PP+ V+++G+ + RD+ ++G SN+LKVVLVGL +AGKT++ R + E+RTVGVE+ + K P E + L VSLWDFAGQ YY +HQ+FLT GALF+LVVD+F + A+ +WL+IL RVPG+VV LVGTH D F A+ C + + +R K+D V + R E + + + + EG + L+ G+ R P RV +K L + TS D ++ + L+ + A D +SFPSV ++VP ++ AIA +EA+ G+ R G+P FV + +A+ F S + SN EP+ I + A+ EA G ILL+ D ++ A +IH++P +LV+R++D LVD R+Q ++ E + A R L HK F++ G + ++YL+FLW+ L E + E L + M+ +++ F+YR +GQ YVV + LP NV I +G A+ K + H +P G++ R LA+ ACW+ G +K VLLYE GT +W ++C R SD L ++ +++ LI D+ +G+PG+ L + S E +E +I + L +I++ + + F D + P PRLV + P E + E D S E W+ R W +R G + FLC YD S CGP G+GY + + +P + L + +++ + +P D + L A G EE L + A G +D EG Q G + YE L E +K E G +G P K + R E EWAWVR N+ F
Sbjct: 319 ENNPWKEPPAEVMNKGMAHAAVFLRDLDDYGRAWSNRLKVVLVGLGEAGKTSIATRLEDRLGSSCPKPEERTVGVEIRDIKLGPGPTNEGSGPNVELDVSLWDFAGQRAYYDTHQMFLTPGALFVLVVDMFTYTEGQ----SREDALEQWLEILQARVPGSVVLLVGTHTDLFAENAAEC------------------------------------------------TRRTDRFKKD-VEEIMTRLRCECDSAKDRVETELGEGH---TTDLK---GNPRYQPLRVVLKEELLALDL------TSSDGQD-IDLLQQRLEHLAYNGYDGYSFPSVRSVVPEPYLPAIATLEAVRRGADLRGSGRTREAVAQRLGEGDPKKRRSFVRFSEAVSLFTKQKGSMFSRVSNLFRRAGEPRRIFLAAVKSHEAHGAILLTGVDGGGGSQEQHNTGIGAAASAADLIIHVNPSRFADLVRRVVDVRLVDPRQQAKVEEAMEACTSVRPM----LLTLTDQHKRFVKAGEVSKDYLKFLWLRDMDLGEASQEAPPLEMSEADVEVMVGSLLDVRFMYRV----RDGQHAFVPDRYVVASCLPNKAGLNVDPGKILELKMGSAIYSQKLKLVGAHAVPPGLVPRLLAWCGRGEGRIKACWKRGVCFAFKNHL----VLLYEVRAIDGT-SW------IECHARGNVSDDDSARTALKDIGDQVHELINDHKYGFPGLGL--------VRSGESEETVISSDSDHKALLERIVDVLRDQMNVKFMMDRSMRQDVAFLRWPIPRLVCVLPAPESRAKPLEEKD----RSFEQWSATLRNWCVDGKRTGKGFATRKLRVFFLCPYDRSLAECGPGGQGYEVTELLGWAKKAMPFAEVGRALASIALRVCIGLAIPEVDFEATLGTVAGGALSKFAEESLNSGIESVASIAGERLDGGRAEGLPQGAGAHGAQQGWPSPVQGFTYETLKEVIKSFEVDGMRGRSP--FPSFDAKMHLVDRGGRGE---------EWAWVRTKNIDQF 1246
BLAST of mRNA_H-canaliculatus_F_contig1299.2473.1 vs. uniprot
Match: A0A6H5K9A9_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9A9_9PHAE) HSP 1 Score: 232 bits (592), Expect = 8.790e-59 Identity = 259/949 (27.29%), Postives = 397/949 (41.83%), Query Frame = 2
Query: 1214 PKDLASEWASMKLHETRLGLFLDGNPWVRPPSTVLSQGLDAVEKWWRDIANFGEGTSNKLKVVLVGLAKAGKTTVVRHFTGRQPA-----EKRTVGVEVTEWK---------PREELPLSVSLWDFAGQSEYYSSHQIFLTQGALFLLVVDVFELSRDPPGLADPRGAIFRWLDILHDRVPGAVVGLVGTHGDKFFHQASPCSSSSSSSSCGLDDSXXXXXXXXXXXXXXXSPGQQQLEDAEKRFLDLVRSYQAERAKEDKVLRNYAQSRAEGELSSRKASKDAEEGRQRASAGLRRTPGSFRMPPARVMKTTGKPLSIPGKIFRTSVDRRNNVAELKDWIVEAATEKED-FSFPSVGAIVPPAWMDAIAAVEA--LGQE----------------RGNP-----FVMWDDAL-----KSFQSHYKNKSNKPPG---------------------DIEPKSILIQALAHREAEGGILLSMED--------------RSSPAEGDVIHLDPRWLMELVKRIIDHNLVDERKQGRIPEELVAYEETRGPTPGGFSRLYKAHKSFIRQGRLDQEYLRFLWVH-RKLDEGNYEGVDLNGCFKN---MLDAMIRYLFIYRAPEPSNNG-QEVYVVPARLP-LYGKENVLAENIGL--GEAVEGIKAWFIRTH-LPSGIIGRFLAFTAESIVSSGACWQHGAHIKWKKDAHTYDVLLYETTENKGTRTWPAISVFVKCERSKASDVLAELEEKLKSLIRDNVHGYPGVCLPAFDDIRGLTSNELQEHLIPYLDTQFSNLTKILENISNYSVRIFKNSFPSYFDPEKQPYPRLVVLKPVAEDQEASTGEHDEGTIHSREMWNRWARLW--KSRRAGDSCY-----LVFLCAYDFSEIPCGPEGKGYLIQNPGELVQSMLPLLQGALWLLRVGIKIVSAIDLPLNDLSSALVQSAFG 3778
P+ +A E+A+ + + + D NPW PP+ V+ +G+ + RD+ ++G SN+LKVVLVGL AGKT++ R E+RTVGVE+ K + L VSLWDFAGQ YY +HQ+FLTQGALF+LVVD+F + P A+ +WLDIL RVPGAV+ LVGTH D F A+ C+ + ++ +E KR S Q + AK + AE EL R D E G+ P RV+ L++ TS D + + L+ + A D +SF SV ++VP ++ IA +EA LG + G+P FV + +A+ + +S SN D E + I + A+ EA G ILL+ D ++ A +IH++P +LV+R++D LVD R+Q ++ + + A R L HK F++ G + ++YL+FLW+ +L + + E L + M+ +++ F+YR + + + YVV + LP G E + + L G AV K + H +P G++ R LA+ ACW+ G +K + VLLYE + G +W A L ++ +++ LI D +G+PG+ L + L S++ L + N+ + N+ R K + P PRLV + P E E D S + W+ R W +R G L FLC YD S CGP G+GY + + +PL + L L K+ + + +P D + L A G
Sbjct: 7 PRLVAEEFAA-----SSVTVDTDNNPWKEPPADVMKRGMAYAAVFLRDLDDYGRAWSNRLKVVLVGLGGAGKTSIATRLEDRLGGCCPNPEERTVGVEIRNIKLGPGATSEGSGPNVELDVSLWDFAGQRAYYDTHQMFLTQGALFVLVVDMFAYAEGH----SPEDAVEQWLDILQARVPGAVLLLVGTHTDLFEDNATECTKRT-------------------------DRFKKDVEKIMKRI-----SCQCDSAK----------NLAETELGERHP--DLE--------------GNPHYRPLRVVLEEDL-LTLD----LTSSDWED-IGLLQRRLEHLAYNGYDGYSFSSVRSVVPEPYLPVIATLEAVRLGADLRGSGGTREAVVQRLREGDPRKRRSFVRFSEAVSLHRKQQEESTLSRVSNLAASLLFPXXXXXXXXXXXXXLFGRDDELRRIFLAAIKSHEAYGAILLTEVDGGGCPQEQRNVGIGAAASAADLIIHVNPSRFADLVRRVVDVRLVDPRQQVKVEQAMAACPSVRPM----LLTLTDQHKRFVKAGEVSKDYLKFLWLRDMELGQASPEAPPLEMSEADVDVMVGSLLDVRFMYRVRDGHDAFVPDRYVVASCLPNKAGPEVDPGKMLELKAGSAVYSQKLKLVGAHAVPPGLVPRLLAWCGRGEGHIKACWKRGVCFAFKN----HMVLLYEVRDTAGN-SWIECHARGSMFDESARTALNDIGDQVNELINDRKYGFPGLGLIRGESEEALVSSDGDHEA---LVKRIVNMLRDQMNVKFMMDRSIKQDLAFL----RWPIPRLVCVLPAPESGAKPLEEKD----RSFDKWSATLRNWCLGGKRKGKGVATRKLRLFFLCPYDRSLAECGPGGQGYEVTELLTWAKKAIPLAKVGLALASTAFKVCTGLSIPEADFEATLGTKAGG 864
BLAST of mRNA_H-canaliculatus_F_contig1299.2473.1 vs. uniprot
Match: A0A6H5L2L4_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2L4_9PHAE) HSP 1 Score: 225 bits (573), Expect = 1.800e-56 Identity = 264/1013 (26.06%), Postives = 403/1013 (39.78%), Query Frame = 2
Query: 1286 NPWVRPPSTVLSQGLDAVEKWWRDIANFGEGTSNKLKVVLVGLAKAGKTTVVRHFTGRQPA-----EKRTVGVEVTEWK-----------PREELPLSVSLWDFAGQSEYYSSHQIFLTQGALFLLVVDVFELSRDPPGLADPRGAIFRWLDILHDRVPGAVVGLVGTHGDKFFHQASPCSSSSSSSSCGLDDSXXXXXXXXXXXXXXXSPGQQQLEDAEKRFLDLVRSYQAERAKEDKVLRNYAQSRAEGELSSRKASKDAEEGRQRASAGLRRTPGSFRMPPARVMKTTGKPLSIPGKIFRTSVDRRNNVAELKDWI-VEAATEKEDFSFPSVGAIVPPAWMDAIAAVEALGQERGNP-----FVMWDDALKSFQSHYKNK-----SNKPPGDIEPKSILIQALAHREAEGGILLSMED--------------RSSPAEGDVIHLDPRWLMELVKRIIDHNLVDERKQGRIPEELVAYEETRGPTPGGFSRLYKAHKSFIRQGRLDQEYLRFLWVH-RKLDEGNYEGVDLN---GCFKNMLDAMIRYLFIYRAPEPSNNGQEV-----YVVPARLPLYGKENVLAENI---GLGEAVEGIKAWFIRTH-LPSGIIGRFLAFTAESIVSSGACWQHGAHIKWKKDAHTYDVLLYETTENKGTRTWPAISVFVKCERSKASDVLAELEEKLKSLIRDNVHGYPGVCLPAFDDIRGLTSNELQEHLIPYLDTQFSNLTKILENISNYSVRI---FKNSFPSYFDPEKQPYPRLVVLKPVAEDQEASTGEHDEGTIHSREMWNRWARLW--KSRRAGDS-----CYLVFLCAYDFSEIPCGPEGKGYLIQNPGELVQSMLPLLQGALWLLRVGIKIVSAIDLPLNDLSSAL------VQSAFGEFEEHLPRDFDADPTGFNVDATWEEGQS------GRFKELHEP----AYEKLCEFMKKEEGSKGACPCLHRFLCGKTSTQP-KNWRDEMEQVKHGN--GEWAWVRRSNLKSF 4075
NPW PP+ V+ +G+ + +D+ ++G N+LKVVLVGL +AGKT++ GR + E+RTVGVE+ + K P +EL VSLWDFAGQ YY +HQ+FLT GALF+LVVD+F A+ +WL+IL RVPG+++ LVGTH D F A+ C+ + S G SP ++D R Y+ + AK+ RAE EL G P P ++ N+A DW ++ + ++ + GA + + A + L + GNP FV + +A+ F + + SN D EP+ I + A+ EA G I L+ D ++ A +IH++P +LV+R++D LV R+Q ++ E + A R L HK FI+ G + ++YL+FLW+ L E + E L + M+ +++ F+YR +GQ YVV + LP +V I G A+ K +R H +P G++ R L+ H+ VLLYE GT +W A L ++ +++ LI D+ + +PG+ GL + E + Y D+ L + + ++ + + S + P PRLV + P E E D S E W+ R W +R G + FLC YD S CGP G+GY + E + +P + L L + +++ + +P D + L S F E H + A G +D EG G +E P YE L E +K E + G P ++ +M V G EWAWVR N+ F
Sbjct: 66 NPWKEPPAKVMEKGMAHTAVFLKDLDDYGRAWYNRLKVVLVGLGEAGKTSIATRLEGRLGSSCPKPEERTVGVEIRDIKLGPGPTNEGIGPNDEL--DVSLWDFAGQRAYYDTHQMFLTPGALFVLVVDMFTYEVGQ----SKEDALEQWLEILQARVPGSIMLLVGTHTDLFKANAAECTRRTDSFKEGRS------YCSTSSNNSYLSPWPTDVDDIMTRM-----RYECDSAKD----------RAEAELGE-----------------------------GHTTDLKGNPRYQPLRVVLEEDLLALNLAS-SDWQDIDLLQHRLEYLAYNGGADLRGSGSTREAVAQRLRE--GNPKKRRSFVRFSEAVSLFAAQQEGSMLSWLSNSFLRDNEPRRIFLAAVKSHEAHGAIHLTGVDGGGGSQEQHNTGIGAAASAADLIIHVNPSRFADLVRRVVDVRLVAPRQQAKVEEAMEACPLVRS----SLLTLTDQHKRFIKTGEVSKDYLKFLWLRDMDLREASQEAPPLEMSEADVEVMVSSLLDVRFMYRV----RDGQHAFVPDRYVVASCLPNKAGPDVDPGKILELKTGNAIYSQKLKLVRVHAVPPGLVPRLLS----------------CHL----------VLLYEVRATDGT-SWIECHARGNVFDESARTALKDIGDQVDELISDHKNRFPGL---------GLVRSGESEETVVYSDSDHKALLERIVDVQRDQMNVKLMMDRSMRQDVAFLRWPIPRLVCVLPAPESGAKPLEEGD----RSFEQWSATLRNWCLGGKRTGKGFATRKLRMFFLCPYDRSIAECGPGGQGYEVTELVEWAKKAMPSAKVGLALASIALRVCIGLAIPEVDFKATLGTKAGGALSTFAEESLHSGVESVASIAGDRLDGGRAEGLPHGAGGHGAQQEWPSPMQGITYETLKEVIKSFE------------VDGMRHRSPFPSFDVKMRLVDRGGRGAEWAWVRTKNIDQF 959
BLAST of mRNA_H-canaliculatus_F_contig1299.2473.1 vs. uniprot
Match: D8LLG1_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLG1_ECTSI) HSP 1 Score: 180 bits (456), Expect = 6.970e-42 Identity = 264/1075 (24.56%), Postives = 414/1075 (38.51%), Query Frame = 2
Query: 1265 LGLFLDGNPWVRPPSTVLSQGLDAVEKWWRDIANFGEGTSNKLKVVLVGLAKAGKTTVVRHFTGRQ-----PAEKRTVGVEVTEWKPREELPLSVSLWDFAGQSEYYSSHQIFLTQGALFLLVVDVFELSRDPPGLADPRGAIFRWLDILHDRVPGAVVGLVGTHGDKFFHQASPCSSSSSSSSCGLDDSXXXXXXXXXXXXXXXSPGQQQLEDAEKRFLDLVRSYQAERAKEDKVLRNYAQSRAEGELSSRKASKDAEEGRQRASAG---LRRTPGSFRMPPARVMKTTGKPLSIPGKIFRTSVDRRNNVAELKDWIVEAATEKEDFSFPSVGAIVPPAWMDAIAAVEAL--------------------GQERGNPFVMWDDALKSFQSHYKNKSNKPPGDIEPKSILIQALAHREAEGGILLSMEDRSSPAEGDVIHLDPRWLMELVKRIIDHNLVDERKQGRIPEELVAYEETRGPTPGGFSRLYKAHKSFIRQGRLDQEYLRFLWVHRKLDEGNYEGVDLNGCFKNMLDAMIRYLFIYRAPEPSNNGQ-EVYVVPARLPLYGKENVLAENIG-LGEAVE-GIKAWFI----RTHLPSGIIGRFL------------------------AFTA---ESIVSSGAC--------------------WQHGAHIKWK-KDA--HTYDVLLYETTEN----KGTRTWP-AISVFVKCERSKASDVLAELEEKLKSLIRDNVHGYPGVCLPAFDDI-RGLTSN--ELQEHLIPYLDTQFSNLTKILENISNYSV--------------RIFKNSFPSYFDPEKQPYPRLVVLKPVAEDQEASTGEHDEGTIHSREMWNR--WARLWKSRRAG-----DSCYLVFLCAYDFSEIPCGPEGKGYLIQNPGELVQSMLPLLQGALWLLRVGIKIVSAIDLPLNDLSSALVQSAFG---EF-EEHLPRDFDADPT--------GFNVDATWEEGQSGRFKE-LHEP------AYEKLCEFMKK---EEGSKGACPCLHRFLCGKTSTQPKNWRDEMEQVKHGNG--EWAWVRRSNLKSF 4075
L + L GNPW PP V+ G D V + ++ G LKVVLVG AGKTT+ R + P R + V + W P + PL V +WDFAG +Y+S+HQ+FLT GAL LLVVD+ + RD + G ++ WLD L RVPG+ V +V TH D F D RS A A + V + R + + R ++ + AS G + +P P + G +S+ G+ S+D + V E K W V E FPSV IVP W A ++AL G+++ + FV + A + + SH +S ++ ++ R + + L S A +IHL+P W+ L++ ++DH L D + ++L AYE RG + L + H+ F G L +E+LRFLW +GVD F +++ M + ++ + G ++VPARLP + V ++ L +A+ G + F+ ++P II +FL AF A E +V G ++ G IK KD Y L ++++ + GT W ++ K D+ +L+++L+S++ + + + G L + + R L S + Q LD + + +E + S+ R NS P P L+ + P E E D S E W+ R + + G L FLC D S CGP+G+GY + + PL + L L + +K+ + + +P D+ + L +A G EF EE L +A T G + G +E + P AY++L E ++ +E KG P ++ M+ V G EWAWVRR N+ +
Sbjct: 146 LSVDLKGNPWETPPWNVIQGGWDQVVSFHEGLSQSGGQVVPSLKVVLVGAVGAGKTTLARGLLDGKIAQTLPPRTRGIDVHIQPWVPDFDPPLEVLIWDFAGHDDYHSTHQMFLTDGALHLLVVDLHKFDRD---VLSRGGGVYIWLDSLLCRVPGSAVLVVATHADAFGD-------------------------------------------------DHERSAGALEALKAAVTEHLETKRQDWLAAKRLEERELMSQARPASTGRDFMSESPADRSKPAPPSLHLCGF-ISVSGR----SLDGLSTVGE-KIWEVA----NEPAVFPSVRKIVPGIWRRVWAVMDALHVGADPDSAVRLEGPVVTIEGRDK-HEFVTEEQAFEVW-SHADRESATQLEAAGHFGEQLRLVSSRHFKAALNLRHMGGSVLAVCGLIHLNPSWINVLLREVLDHRLTDPNEDEWWWKQLKAYERNRGIP---INELLETHRHFTTTGILTEEFLRFLW------RDVLKGVD-EKVFARLVETMTAHDAMFPCNDGVTEGNVREFMVPARLP----DGVTGDSFAKLEDAMSRGTRMQFVIEIYAKYVPPAIIAKFLGGFGRDESGVFRNLMFRTCWARGVAFVADGRECLVRVGEVSARPLPMIEINIAGPDVNDVFKVGFEIKKNVKDLLREAYPGLAFDSSAHPRFENGTEAWQDSLEALQK-------DLFDKLDQRLESVLSEFLEAFKGQSLSVNEAVARRLNSLCLDCQRDANFQLDAKVHEVVARVEQVVRASLSTTAVPKGGLNETERGILNSLARNVAFLLWPIPSLMCVLPARESGAKPLDERD----RSFEEWSTVLQKRCSEGNKMGRGVATQKLRLFFLCPLDMSLAECGPDGQGYQVTELLSWAKKAKPLAELGLALASIAVKVCTGLAMPAADIEAVLGTNAGGVLSEFVEEALTSSVEAMATVAGERLEDGSPAERVHHAGACRLEREKMRRPTPVQGFAYDQLKEVIRSFDVDETQKGKSPV-------------PSFDKTMQLVDRGGRGVEWAWVRRRNVDQY 1118
BLAST of mRNA_H-canaliculatus_F_contig1299.2473.1 vs. uniprot
Match: A0A8J9VRT8_BRALA (MFHAS1 protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8J9VRT8_BRALA) HSP 1 Score: 118 bits (295), Expect = 1.180e-22 Identity = 136/517 (26.31%), Postives = 215/517 (41.59%), Query Frame = 2
Query: 1277 LDGNPWVRPPSTVLSQGLDAVEKWWRDIANFGEGTSNKLKVVLVGLAKAGKTTVVRHFTGRQPA----EKRTVGVEVTEWKPREELPLSVSLWDFAGQSEYYSSHQIFLTQGALFLLVVDVFELSRDPPGLADPRGAIFRWLDILHDRVPGAVVGLVGTHGDKFFHQASPCSSSSSSSSCGLDDSXXXXXXXXXXXXXXXSPGQQQLEDAEKRFLDLVRSYQAERAKEDKVLRNYAQSRAEGELSSRKASKDAEEG--RQRASAGLRRTPGSFRMPPARVMKTTGKPLSIPGKIFRTSVDRRNNVAELKDWIVEAATEKEDFSFPSVGAIVPPAWMDAIAAVEAL---GQERGNPFVM---WDDALKSFQSHYKNKSNKP--------------PGDIEPKSILIQALAHREAEGGILLSMEDRSSPAEGDVIHLDPRWLMELVKRIIDHNLVDERKQGRIPEELVAYEETRGPTPGGFS--RLYKAHKSFIRQGRLDQEYLRFLWVHRKLDEGNYE 2743
+DGNP ++PP+ V S+G+DA+ +++ ++ E S +LKVV++G AGKT++VR E RT VE+T+W P + + V +DF G Y+ +H+ FLTQGAL LL V++ R AI WLD L+ RVPGAVV +VG+ D CS + D E++ D+ ++ + + +R +L + + KD + G ++ L RT R + T +PL + G +S + + + LK IVE+A + FP + I+P W + L G E GN V W + SF S KP G IE + L L++ + G IL + P D + DP L++++K + H +LV + P GFS +L K ++ + +G L +E + L GN +
Sbjct: 603 VDGNPLIKPPAEVCSEGIDAIRQYFEELERSDEKVSARLKVVVLGEKMAGKTSLVRTLVSGVSTLTEEEDRTHCVEITQWTPDDNITFEV--YDFGGHDVYHLTHRFFLTQGALNLLTVNLKTYRCTEQSY---REAIGFWLDTLNARVPGAVVTIVGSKTDM-------CSDA----------------------------------DIEEKTRDIQERFKQQNDVWQETIRQQIT-----KLENARTVKDVKVGTDQEEVQQQLERT---------RQLLT--RPLRLTGVFCVSSAESTSGLDTLKSHIVESANNTQ--LFPILRIILPQTWAKFEKRLRNLRDRGTETGNSDVSTQSWYFSDYSFSLDSDLDSGKPVWLTRDECLQHGKRAGLIEDR--LEPVLSYLQQVGTILRYTD---IPELKDFVFHDPSGLIDVIKELFHH-------------DLVKVFTNKNPRLKGFSNTKLKKIRRNLLGRGFLPREVVSALLGPHATPVGNVD 1037 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1299.2473.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1299.2473.1 >prot_H-canaliculatus_F_contig1299.2473.1 ID=prot_H-canaliculatus_F_contig1299.2473.1|Name=mRNA_H-canaliculatus_F_contig1299.2473.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=1304bp MSEWYGVETNSEGRVISLDLAYNSLEGQLPSGLGELKFLKTLNLSMNELTback to top mRNA from alignment at H-canaliculatus_F_contig1299:538..20485+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1299.2473.1 ID=mRNA_H-canaliculatus_F_contig1299.2473.1|Name=mRNA_H-canaliculatus_F_contig1299.2473.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=19948bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1299:538..20485+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1299:538..20485+ >mRNA_H-canaliculatus_F_contig1299.2473.1 ID=mRNA_H-canaliculatus_F_contig1299.2473.1|Name=mRNA_H-canaliculatus_F_contig1299.2473.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=7824bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1299:538..20485+ (Hapterophycus canaliculatus Oshoro5f female)back to top |