mRNA_H-canaliculatus_F_contig12980.2470.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig12980.2470.1 vs. uniprot
Match: A0A6H5L0B8_9PHAE (Nfu_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L0B8_9PHAE) HSP 1 Score: 142 bits (357), Expect = 7.570e-38 Identity = 79/100 (79.00%), Postives = 85/100 (85.00%), Query Frame = 1
Query: 1 SDLGNPAAVPIAAAGLRDKSKLVRWRAARVVGELASREQDAVSLDEARAGEEEFEVAFEMSDAARKVRARVAAAATAAEGGEDGVAVAGVGPVWKQIQER 300
SDLG+PAA+PIA GLRDKSKLVRWRAARVVGELA+REQDAVSLDEAR GE EFEVAFEM+DAARK+RARVAA G E+ AGVGPVWKQIQER
Sbjct: 418 SDLGDPAAIPIAVGGLRDKSKLVRWRAARVVGELATREQDAVSLDEAREGEVEFEVAFEMADAARKIRARVAA-----PGEEEVATAAGVGPVWKQIQER 512
BLAST of mRNA_H-canaliculatus_F_contig12980.2470.1 vs. uniprot
Match: A0A7S3BA81_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3BA81_9EUKA) HSP 1 Score: 81.6 bits (200), Expect = 5.830e-18 Identity = 51/99 (51.52%), Postives = 61/99 (61.62%), Query Frame = 1
Query: 1 SDLGNPAAVPIAAAGLRDKSKLVRWRAARVVGELASREQDAVSLDEARAGEEEFEVAFEMSDAARKVRARVAAAATAAEGGEDGVAVAGVGPVWKQIQE 297
SDLGN A P+A A L D+S LVRWRAAR++GE+ A +L +A E FEVAFEM DAARKV +R A EGG G P+WKQIQ+
Sbjct: 22 SDLGNGRAAPLAVAALTDRSTLVRWRAARILGEVGEGGSVAAALKQASLEEAAFEVAFEMKDAARKVASR-----DAGEGGAKG-------PMWKQIQD 108
BLAST of mRNA_H-canaliculatus_F_contig12980.2470.1 vs. uniprot
Match: A0A7S2XS20_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XS20_9STRA) HSP 1 Score: 75.9 bits (185), Expect = 7.290e-15 Identity = 53/104 (50.96%), Postives = 65/104 (62.50%), Query Frame = 1
Query: 1 SDLGNPAAVPIAAAGLRDKSKLVRWRAARVVGELA-SREQDAVSLDEARAGEEEFEVAFEMSDAARKVRARVAAAATAAEGGEDGVAVAG----VGPVWKQIQE 297
SDLG+ AV A + L DKSKLV+WRAAR++GEL S + AV + + E FEVAFE+ DA RKVRAR+ + E GV V G GP+WKQIQE
Sbjct: 93 SDLGDARAVTCAVSALGDKSKLVQWRAARILGELGDSMDVMAVLKQASFSSEYAFEVAFEIKDAMRKVRARL-------QNKESGVNVNGSGPATGPMWKQIQE 189
BLAST of mRNA_H-canaliculatus_F_contig12980.2470.1 vs. uniprot
Match: A0A1E7EQX7_9STRA (Nfu_N domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EQX7_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 7.860e-15 Identity = 53/105 (50.48%), Postives = 69/105 (65.71%), Query Frame = 1
Query: 1 SDLGNPAAVPIAAAGLR-DKSKLVRWRAARVVGELASREQDAVSLDEAR---AGEEEFEVAFEMSDAARKVRARVAAAATAAEGGEDGVAVAGVGPVWKQIQERG 303
SDLG+ AVP A L D+SKLV+WRAAR++GELA + A L + +G+ FEVAFE+ DA RKV+AR+ + +G + VA A GP+WKQIQERG
Sbjct: 470 SDLGDQRAVPYAVTALEGDRSKLVQWRAARILGELADSTEIAGFLKQQTFDGSGKYAFEVAFEIKDALRKVQARLRQNDNSNDGNKK-VAPAPKGPIWKQIQERG 573
BLAST of mRNA_H-canaliculatus_F_contig12980.2470.1 vs. uniprot
Match: A0A7S2XB48_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2XB48_9EUKA) HSP 1 Score: 75.1 bits (183), Expect = 7.450e-14 Identity = 48/105 (45.71%), Postives = 64/105 (60.95%), Query Frame = 1
Query: 1 SDLGNPAAVPIAAAGLRDKSKLVRWRAARVVGELASREQDAVS-LDEARAGEEEFEVAFEMSDAARKVRARVAA---AATAAEGGEDGVA--VAGV-GPVWKQIQ 294
+DLG+P A+P A L+D SKLVRWRAA ++GE+ A L EA E FEVAFEM + ++R +AA A +GGEDG + G+ GP+WKQ+Q
Sbjct: 214 NDLGDPRAIPAALRALKDPSKLVRWRAAHLIGEVEGAGTTAADILAEAETNETAFEVAFEMKSSEMRIRKTLAARDGGGAAGDGGEDGASGEAGGIKGPMWKQLQ 318
BLAST of mRNA_H-canaliculatus_F_contig12980.2470.1 vs. uniprot
Match: A0A7S0H5Y1_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0H5Y1_9EUKA) HSP 1 Score: 71.2 bits (173), Expect = 3.100e-13 Identity = 47/103 (45.63%), Postives = 66/103 (64.08%), Query Frame = 1
Query: 1 SDLGNPAAVPIAAAGLRDKSKLVRWRAARVVGELASRE-QDAVSLDEARAGEEEFEVAFEMSDAARKVRARVAAAATAAEGGEDGVAVAGVGPVWKQIQERGL 306
+DLG+P +P A L D SKLVRWRAA ++GE+ +D +L++AR E+ FEVAFEM+ +A ++RA +A EG +GV GP+WKQ+ RGL
Sbjct: 85 NDLGDPRGIPAARRALGDPSKLVRWRAAHILGEVEGGGLEDLTALEKAREREDAFEVAFEMAMSADRLRA------SAGEGDAEGVK----GPMWKQL--RGL 175
BLAST of mRNA_H-canaliculatus_F_contig12980.2470.1 vs. uniprot
Match: A0A7S3VDY6_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VDY6_9STRA) HSP 1 Score: 68.2 bits (165), Expect = 3.510e-11 Identity = 44/108 (40.74%), Postives = 62/108 (57.41%), Query Frame = 1
Query: 1 SDLGNPAAVPIAAAGLR-DKSKLVRWRAARVVGELASREQDAVSLDEARAGEEE--FEVAFEMSDAARKVRARVAAAATAAEGGE------DGVAVAGVGPVWKQIQE 297
SDLG+P A+P A + D+S+LV+WRAAR++GE + L +A ++ F++AFE+ DA RKV+ARV A + G D GP+WKQIQE
Sbjct: 455 SDLGDPRAIPYAITAMEEDRSRLVQWRAARILGEFGDAPETLAVLKQASFSSDKYAFDIAFEIKDALRKVKARVVQAQERQQNGNGNDANIDANKAPRKGPMWKQIQE 562
BLAST of mRNA_H-canaliculatus_F_contig12980.2470.1 vs. uniprot
Match: A0A7S3YPQ0_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YPQ0_9EUKA) HSP 1 Score: 65.1 bits (157), Expect = 3.920e-10 Identity = 46/104 (44.23%), Postives = 61/104 (58.65%), Query Frame = 1
Query: 1 SDLGNPAAVPIAAAGLRDKSKLVRWRAARVVGEL-ASREQDAVSLDEARAGEEEFEVAFEMSDAARKVRARVAAAATAAEGGEDGVAVA-GV-GPVWKQIQERG 303
+DLG+P A+P A L D SKLVRWRAA ++GE+ + +A L EA E FEVAFEM + +VR + GG+D GV GP+WKQ+Q+ G
Sbjct: 285 NDLGDPRAIPAALRALNDPSKLVRWRAAHLLGEVEGAGAAEADILSEAAETETAFEVAFEMKSSEMRVRKTLGDGV----GGDDXXXXXXGVKGPMWKQLQQSG 384
BLAST of mRNA_H-canaliculatus_F_contig12980.2470.1 vs. uniprot
Match: A0A3R9M9I8_9BACI (Virulence factor n=1 Tax=Bacillus sp. HMF5848 TaxID=2495421 RepID=A0A3R9M9I8_9BACI) HSP 1 Score: 57.8 bits (138), Expect = 1.470e-7 Identity = 41/102 (40.20%), Postives = 56/102 (54.90%), Query Frame = 1
Query: 1 SDLGNPAAVPIAAAGLRDKSKLVRWRAARVVGELASREQDAVSLDEARAGE--EEFEVAFEMSDAARKVRARVAAAATAAEGGEDGVAVAGVGPVWKQIQER 300
SDLG+PAA+P L+DK+KLVRWRAA + E+ D +LD R + EFEVA ++ A +++ E GE+ V G VWKQ+ ER
Sbjct: 288 SDLGDPAAIPTMIRALKDKNKLVRWRAAMFLYEVG----DETALDALREAQYDSEFEVAMQIKLALKRI-----------EAGEEAV-----GSVWKQMTER 369
BLAST of mRNA_H-canaliculatus_F_contig12980.2470.1 vs. uniprot
Match: UPI000C826BB4 (conserved virulence factor C family protein n=1 Tax=Bacillus sp. Marseille-P3661 TaxID=1936234 RepID=UPI000C826BB4) HSP 1 Score: 53.1 bits (126), Expect = 6.280e-6 Identity = 36/99 (36.36%), Postives = 54/99 (54.55%), Query Frame = 1
Query: 1 SDLGNPAAVPIAAAGLRDKSKLVRWRAARVVGELASREQDAVSLDEARAGEEEFEVAFEMSDAARKVRARVAAAATAAEGGEDGVAVAGVGPVWKQIQE 297
SD+GNP +P+ L+DK+KLVRWRAA + E+ +Q A++ + EFEVA ++ A +++ EGGE+ G VWKQ+ E
Sbjct: 293 SDIGNPDGIPVMIKSLKDKNKLVRWRAAMFLFEVG--DQTAIAALRDAQEDPEFEVAMQVKLALQRI-----------EGGEEAK-----GSVWKQMTE 373 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12980.2470.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig12980.2470.1 >prot_H-canaliculatus_F_contig12980.2470.1 ID=prot_H-canaliculatus_F_contig12980.2470.1|Name=mRNA_H-canaliculatus_F_contig12980.2470.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=103bp SDLGNPAAVPIAAAGLRDKSKLVRWRAARVVGELASREQDAVSLDEARAGback to top mRNA from alignment at H-canaliculatus_F_contig12980:436..744+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig12980.2470.1 ID=mRNA_H-canaliculatus_F_contig12980.2470.1|Name=mRNA_H-canaliculatus_F_contig12980.2470.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=309bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12980:436..744+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig12980:436..744+ >mRNA_H-canaliculatus_F_contig12980.2470.1 ID=mRNA_H-canaliculatus_F_contig12980.2470.1|Name=mRNA_H-canaliculatus_F_contig12980.2470.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=618bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12980:436..744+ (Hapterophycus canaliculatus Oshoro5f female)back to top |