prot_H-canaliculatus_F_contig12960.2462.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig12960.2462.1
Unique Nameprot_H-canaliculatus_F_contig12960.2462.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length257
Homology
BLAST of mRNA_H-canaliculatus_F_contig12960.2462.1 vs. uniprot
Match: D7FX21_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX21_ECTSI)

HSP 1 Score: 300 bits (767), Expect = 1.910e-91
Identity = 183/258 (70.93%), Postives = 207/258 (80.23%), Query Frame = 0
Query:    1 NALAIQSIYDEADQTPGVSMKKIKKKCQRWLNKKAGEDQKMQQANQPAVVRTAGAGXXXXXXXXXLAAQRPTQLVMFCPNNIAPQVIGRGGQTINKLMKDSKAKIVVKPFPDKSG-DIIITGTANTVNTAKRLLEDFYLSKGYEPATLPPPFSAANQQQQLGHLGLARGAAPRAAAARPLAGGGFXXXXXXGPAPGPVVVEDGAWGGELRQLLKVAGCEHHLDGFRRDQLDGEVLLMMERRDFARMGVTEVGLMVRLL 257
            N LA+QSIYDEADQTPG SMKKIKKKCQR+LNKKAGEDQK+QQA+QPA VR A   XXXXXXXX   AQRPTQ  MFCPNNIAPQ+IG+ GQT+NKLMKDS+AKIVVKP+PD+SG D+IITGT N V TAKRL+E+FY SKG +P+ LPPP SA   ++       A GA  RA  A+P+ GG  XXXXXX      VVVEDGAWGGELRQLL+VAGCEHHL+ FR DQLDGEVLLMM+RRDF RMGVTE G  +R+L
Sbjct:  697 NTLAVQSIYDEADQTPGASMKKIKKKCQRYLNKKAGEDQKLQQASQPAPVRGAXXXXXXXXXXX---AQRPTQHDMFCPNNIAPQLIGKQGQTVNKLMKDSRAKIVVKPYPDRSGNDVIITGTPNAVKTAKRLVEEFYRSKGCQPSALPPPSSAVAARK-------AEGA--RARPAQPVTGGPXXXXXXXXXX---VVVEDGAWGGELRQLLRVAGCEHHLERFREDQLDGEVLLMMDRRDFERMGVTE-GEQIRIL 938          
BLAST of mRNA_H-canaliculatus_F_contig12960.2462.1 vs. uniprot
Match: A0A6H5J8V2_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8V2_9PHAE)

HSP 1 Score: 228 bits (581), Expect = 6.180e-65
Identity = 147/299 (49.16%), Postives = 174/299 (58.19%), Query Frame = 0
Query:    1 NALAIQSIYDEADQTPGVSMKKIKKKCQRWLNKKAGE----DQKMQQANQPAV-----VRTAGAGXXXXXXXXXLAA--QRPTQLVMFCPNNIAPQVIGRGGQTINKLMKDSKAKIVVKPFPDKSG-DIIITGTANTVNTAKRLLEDFYLSKGYEPATLPP-------------------------PFSAANQQQQLGHLGLARG---AAPRAAAARPLAGGGFXXXXXXGPAPGPVVVEDGAW----------GGELRQLLKVAGCEHHLDGFRRDQLDGEVLLMMERRDFARMGVTE 249
            NALA+Q+I+DEADQTPG  MKK+KKKC++WLNKK GE     Q++ QANQP       +R AG G          AA  QRPTQ  MFCPN IA QVIGRGGQT+N+LMK+S+A+IV+KP+ DK+G D++ITG+     TA+RL+EDFY SKG EP  LPP                         P      +  +GHLG  R    A P AAAA  +            P   PVV   G            GGEL QLL+ A CEHHL+ F RDQLDGEVLL MERRDF RMGVTE
Sbjct:  649 NALAVQAIHDEADQTPGADMKKMKKKCKKWLNKKEGEMREEQQRLLQANQPPPNPALGLRQAGPGFGVPTPPVAAAAAAQRPTQYEMFCPNVIAGQVIGRGGQTVNRLMKESRARIVLKPYADKTGHDVVITGSPQA--TARRLVEDFYRSKGIEPTHLPPXXXXXXXXXXXXXGRPGGVAPRARLPDPMMPTEAMIGHLGRGRTMAVAGPAAAAAAGMRAPSGAIPQGARPVAQPVVYGGGXXXXXXXXVDVSGGELPQLLRAARCEHHLERFLRDQLDGEVLLEMERRDFDRMGVTE 945          
BLAST of mRNA_H-canaliculatus_F_contig12960.2462.1 vs. uniprot
Match: D7FX18_ECTSI (KH domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX18_ECTSI)

HSP 1 Score: 223 bits (569), Expect = 1.010e-63
Identity = 144/299 (48.16%), Postives = 173/299 (57.86%), Query Frame = 0
Query:    1 NALAIQSIYDEADQTPGVSMKKIKKKCQRWLNKKAGE----DQKMQQANQPAVVRTAG---AGXXXXXXXXXLAAQRPTQLVMFCPNNIAPQVIGRGGQTINKLMKDSKAKIVVKPFPDKSG-DIIITGTANTVNTAKRLLEDFYLSKGYEPATLPPPFSAANQ---------------------------QQQLGHLGLAR---GAAPRAAA------------ARPLAGGGFXXXXXXGPAPGPVVVEDGAWGGELRQLLKVAGCEHHLDGFRRDQLDGEVLLMMERRDFARMGVTE 249
            NALA+Q+I+DEADQTPG  MKKIKKKC++WLNKK GE     Q++ QANQP      G   AG         +AAQRPT+  MFCPN IA QVIGRGGQT+N+LMK+S+A+IV+K + DK+G D++ITG+   V T +RL+EDFY SKG EP  L PP                                 +  +GHLG  R   GA P AA             ARP+A    XXX   G             G EL QLL+ A CEHHL+ F+RDQLDGEVLL MERR+F RMGVTE
Sbjct:  507 NALAVQAIHDEADQTPGADMKKIKKKCKKWLNKKEGEMREEQQRLLQANQPPPNPALGLRQAGPGFGVPTPPMAAQRPTEYEMFCPNVIAGQVIGRGGQTVNRLMKESRARIVLKTYADKTGHDVVITGSPQAVLTGRRLVEDFYRSKGIEPTLLQPPSXXXXXXXXXXXXXGRPGGVAPRARLPDPMMPTEAMIGHLGRGRTMAGAGPAAAVGMRAPSGAIPQGARPVAQXXXXXXMFGGXXXXXXXXXVDVSGVELPQLLRAARCEHHLERFKRDQLDGEVLLEMERREFDRMGVTE 805          
BLAST of mRNA_H-canaliculatus_F_contig12960.2462.1 vs. uniprot
Match: A0A6H5JKP4_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKP4_9PHAE)

HSP 1 Score: 160 bits (405), Expect = 1.130e-43
Identity = 114/255 (44.71%), Postives = 139/255 (54.51%), Query Frame = 0
Query:   67 AAQRPTQLVMFCPNNIAPQVIGRGGQTINKLMKDSKAKIVVKPFPDKSG-DIIITGTANTVNTAK---------------------------------------------------------------RLLEDFYLSKGYEPATLPPPFSAANQQQQLGHLGLARGAAPRAAAARPLAGGGFXXXXXXGPAPGPVVVEDGAWGGELRQLLKVAGCEHHLDGFRRDQLDGEVLLMMERRDFARMGVTEVGLMVRLL 257
            A   P+   +    NIAPQ+IG+ GQT++KLMK+S+AKIVVKP+PD+SG D++ITGT N V  +K                                                               R+ E+FY SKG +P  LPPP SA    ++      A GA  RA  A+P+ G   XXXXXX      VVVEDGAWGGELRQLL+VAGCEHHL+ FR DQLDGEVLLMM+RRDF RMGVT VG  +R+L
Sbjct:   38 AVLAPSPSPLLRAQNIAPQLIGKQGQTVSKLMKESRAKIVVKPYPDRSGNDVVITGTPNAVKVSKSRVLGSTLDCCRGCVRVRCLAIPLYFQAVVVGRCDGVGAGCFVVVVNALSLRHPLQCTRRVTMRVEEEFYRSKGCQPTALPPPSSAVAAARK------AEGA--RARPAQPVTGXXXXXXXXXXXX---VVVEDGAWGGELRQLLRVAGCEHHLERFREDQLDGEVLLMMDRRDFERMGVT-VGEQIRIL 280          
BLAST of mRNA_H-canaliculatus_F_contig12960.2462.1 vs. uniprot
Match: A0A6H5JGK6_9PHAE (WW domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGK6_9PHAE)

HSP 1 Score: 68.2 bits (165), Expect = 2.450e-9
Identity = 30/38 (78.95%), Postives = 35/38 (92.11%), Query Frame = 0
Query:    1 NALAIQSIYDEADQTPGVSMKKIKKKCQRWLNKKAGED 38
            N LA+QSIYDEADQTPG S+KKIKKKC++WLNKK GE+
Sbjct: 1099 NTLAVQSIYDEADQTPGASIKKIKKKCKKWLNKKEGEN 1136          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12960.2462.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FX21_ECTSI1.910e-9170.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J8V2_9PHAE6.180e-6549.16RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D7FX18_ECTSI1.010e-6348.16KH domain containing protein n=1 Tax=Ectocarpus si... [more]
A0A6H5JKP4_9PHAE1.130e-4344.71RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JGK6_9PHAE2.450e-978.95WW domain-containing protein n=1 Tax=Ectocarpus sp... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004087K Homology domainSMARTSM00322kh_6coord: 70..138
e-value: 3.9E-10
score: 49.7
IPR036612K Homology domain, type 1 superfamilyGENE3D3.30.1370.10coord: 32..141
e-value: 4.5E-13
score: 50.6
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 70..138
IPR004088K Homology domain, type 1PFAMPF00013KH_1coord: 75..135
e-value: 4.1E-13
score: 48.9
IPR013761Sterile alpha motif/pointed domain superfamilyGENE3D1.10.150.50coord: 206..257
e-value: 3.6E-6
score: 28.9
IPR013761Sterile alpha motif/pointed domain superfamilySUPERFAMILY47769SAM/Pointed domaincoord: 208..257
NoneNo IPR availablePANTHERPTHR10288KH DOMAIN CONTAINING RNA BINDING PROTEINcoord: 19..155
NoneNo IPR availablePANTHERPTHR10288:SF145P-ELEMENT SOMATIC INHIBITOR, ISOFORM Ccoord: 19..155
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 71..133
score: 12.81
IPR001660Sterile alpha motif domainPROSITEPS50105SAM_DOMAINcoord: 204..257
score: 9.405

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12960contigH-canaliculatus_F_contig12960:716..2968 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12960.2462.1mRNA_H-canaliculatus_F_contig12960.2462.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig12960 716..2968 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig12960.2462.1 ID=prot_H-canaliculatus_F_contig12960.2462.1|Name=mRNA_H-canaliculatus_F_contig12960.2462.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=257bp
NALAIQSIYDEADQTPGVSMKKIKKKCQRWLNKKAGEDQKMQQANQPAVV
RTAGAGGAAAAAAAALAAQRPTQLVMFCPNNIAPQVIGRGGQTINKLMKD
SKAKIVVKPFPDKSGDIIITGTANTVNTAKRLLEDFYLSKGYEPATLPPP
FSAANQQQQLGHLGLARGAAPRAAAARPLAGGGFGGGAAAGPAPGPVVVE
DGAWGGELRQLLKVAGCEHHLDGFRRDQLDGEVLLMMERRDFARMGVTEV
GLMVRLL
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001660SAM
IPR013761SAM/pointed_sf
IPR004088KH_dom_type_1
IPR036612KH_dom_type_1_sf
IPR004087KH_dom