prot_H-canaliculatus_F_contig12953.2456.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig12953.2456.1 vs. uniprot
Match: A0A6H5KUQ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUQ6_9PHAE) HSP 1 Score: 117 bits (292), Expect = 8.090e-29 Identity = 113/233 (48.50%), Postives = 127/233 (54.51%), Query Frame = 0
Query: 1 MSTLTDIFKVQDKVSTKKNKEEKEKDKGFKVASLFD-GL-AGAPPTTTARXXXXXXXXXXXXXXXXXXXXXSTVTTLSNGLEGTAAKGGTGEGPPAPETAGGVILSVGGLSSKNPGPVPSLAAAQPLT---------DAAASHDPAASAAVPLSETGK---------VLWRPLSDVVAFAARFVRTGKREDVESAWLGERRALTQDFKRKHKDAVKGRRGAGAGRGAASKKRR 213
MS LTDIF V+DKVS+KKN+EEK+KDKGFK+ SLFD GL AG XXXXXXXXXX XXXXXXXX L P SL++ DA P + +P+S LWRPL +VVA AARF+RTGKREDVE+AW+GERRALTQDFKRKHKDAVKGRRGA G ASKKRR
Sbjct: 1 MSALTDIFTVKDKVSSKKNREEKDKDKGFKITSLFDAGLTAGXXXXXXXXXXXXXXXXXXAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVLVEGQARPAASLSSXXXXXXXXXXXXXGDAGGESQPGGT--LPVSXXXXXXXXVVVETALWRPLDEVVAIAARFMRTGKREDVEAAWIGERRALTQDFKRKHKDAVKGRRGAAGGGHRASKKRR 231
BLAST of mRNA_H-canaliculatus_F_contig12953.2456.1 vs. uniprot
Match: D7FS94_ECTSI (RRM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS94_ECTSI) HSP 1 Score: 81.3 bits (199), Expect = 2.680e-14 Identity = 41/49 (83.67%), Postives = 44/49 (89.80%), Query Frame = 0
Query: 153 LSDVVAFAARFVRTGKREDVESAWLGERRALTQDFKRKHKDAVKGRRGA 201
L D +A RF+RTGKREDVE+AWLGERRALTQDFKRKHKDAVKGRRGA
Sbjct: 429 LDDRLAELLRFMRTGKREDVEAAWLGERRALTQDFKRKHKDAVKGRRGA 477
BLAST of mRNA_H-canaliculatus_F_contig12953.2456.1 vs. uniprot
Match: A0A835YZR3_9STRA (RRM domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZR3_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 4.890e-8 Identity = 79/198 (39.90%), Postives = 101/198 (51.01%), Query Frame = 0
Query: 1 MSTLTDIFKVQDKVSTKKNKEEKEKDKGFKVASLFDGLAGAPPTTTARXXXXXXXXXXXXXXXXXXXXXSTVTTLSNGLEGTAAKGGTGEGPPAPETAGGVILSVGGLSSKNPGPVPSLAAAQPLTDAAASHDPAASAAVPLSETGKVLWRPLSDVVAFAARFVRTGKREDVESAWLGERRALTQDFKRKHKDAVKGR 198
+ TLTDIF VQDKV+TK + EEK + GFK++SLF G XXXXXXXXXXXXXXXXXX +TV T + G KGG E + + L + V + + +AA PL +W + + A AA+F R G ++E WL RR LT DFKRKHK+A+K R
Sbjct: 568 VGTLTDIFSVQDKVTTKLSAEEKARATGFKLSSLFGG-------DXXXXXXXXXXXXXXXXXXXXXAGEATVHTFAFGGIAEDGKGGD-ESKTSKQKR--TALEQAEPQQRRQQRV------EDKENVDVKRGSKGAAAAPLPPAELRIWGDMDAIRARAAQFCRQGTDAEIEERWLQSRRNLTVDFKRKHKEALKSR 749 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12953.2456.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-canaliculatus_F_contig12953.2456.1 ID=prot_H-canaliculatus_F_contig12953.2456.1|Name=mRNA_H-canaliculatus_F_contig12953.2456.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=215bpback to top |