mRNA_H-canaliculatus_F_contig1295.2453.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig1295.2453.1
Unique NamemRNA_H-canaliculatus_F_contig1295.2453.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig1295.2453.1 vs. uniprot
Match: A0A6H5L2R8_9PHAE (TPT domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L2R8_9PHAE)

HSP 1 Score: 563 bits (1450), Expect = 1.120e-198
Identity = 304/379 (80.21%), Postives = 327/379 (86.28%), Query Frame = 1
Query:   31 SKSSPSKLPGSQSLAPSPF-PQAIEDVELDDRLDDNELSE--SET---LDKEGRMGSVPRIGDNSSSQGGAKKMGEVANAISSCLALSFFSISMILANKYLAASFEAKLHLLPMAFQCFVAVVLVEASRMKGWVQYEPFNMATAMRWFPIAIFFCTMLLSSFLSMQYMNVPMITVFKSLTNLIIVTGDFFWHKQVATPLVLLSLAVMTGGAILASWSDIEFSAWGYFWMSANCFATASYVLTMKFATRTMKLPKFGMVFYNNLLGFLIMLPVAICFGEVFTMDSVGIDGFLDRQDLHTAKYLSINLFAGAAGFFLNFAALWCVGATSATTYAVVNTVNNFPVSILGYFLFPGSTITLKQWEFIVVNIFGGFIYSAAKIK 1149
            S S PS LP + S+ P+     A+EDV+LDD L+DNELS+  SET   + K+  MGSV R GDN    GG KKMGEVANAI+SC ALSFFSISMILANK LA  F A LH LPMAFQCF+AV+LVEASRMKG VQYEPFNMATAMRWFPIAIFFCTMLLSSFLSMQYM VPM+TVFKSLTNLIIV GD+FWH QVATPLVLLSLAVMTGGAILASWSDIEFSAWGYFWMSANCFATASYVLTMKFATRTMKLPKFGMVFYNNLLG LIMLP+A+CFGEVFT++S  + GFLDR DLHT  YL INL AGAAGFFLNFAALWCV ATSATTYAVVNTVNNFPVSILGY+L PG+ I+ +QWEFIVVNI GGFIYSAAKIK
Sbjct:    6 SSSKPS-LPPALSVPPAAHRAAAVEDVDLDDGLNDNELSDGGSETSAAVGKKNTMGSVDRKGDNDH-PGGGKKMGEVANAIASCAALSFFSISMILANKALAVLFNANLHFLPMAFQCFIAVLLVEASRMKGLVQYEPFNMATAMRWFPIAIFFCTMLLSSFLSMQYMGVPMVTVFKSLTNLIIVAGDYFWHSQVATPLVLLSLAVMTGGAILASWSDIEFSAWGYFWMSANCFATASYVLTMKFATRTMKLPKFGMVFYNNLLGCLIMLPLAVCFGEVFTLESTSLVGFLDRADLHTPTYLGINLGAGAAGFFLNFAALWCVSATSATTYAVVNTVNNFPVSILGYYLLPGARISHQQWEFIVVNIVGGFIYSAAKIK 382          
BLAST of mRNA_H-canaliculatus_F_contig1295.2453.1 vs. uniprot
Match: D8LTL4_ECTSI (TPT domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTL4_ECTSI)

HSP 1 Score: 295 bits (755), Expect = 3.230e-94
Identity = 153/300 (51.00%), Postives = 216/300 (72.00%), Query Frame = 1
Query:  250 AISSCLALSFFSISMILANKYLAASFEAKLHLLPMAFQCFVAVVLVEASRMKGWVQYEPFNMATAMRWFPIAIFFCTMLLSSFLSMQYMNVPMITVFKSLTNLIIVTGDFFWHKQVATPLVLLSLAVMTGGAILASWSDIEFSAWGYFWMSANCFATASYVLTMKFATRTMKLPKFGMVFYNNLLGFLIMLPVAICFGEVFTMDSVGIDGFLDRQDLHTAKYLSINLFAGAAGFFLNFAALWCVGATSATTYAVVNTVNNFPVSILGYFLFPGSTITLKQWEFIVVNIFGGFIYSAAKIK 1149
            A+SS L+ SF S+SM+++NK LA ++++ +  L +  QC VA +LVEA R  G+  Y+PFN +TA RW P++I F  ML +SF +++ MNVPM+TVFK+LTN++IVTGD+++ +Q A+ LV+ S+AVM  GA+ AS++D++F+ WGYFWM ANC  TA YVL MK AT+++KLP+FGMVFYNNLL   ++ P A   G+ FT+       F     L T  Y++  LF+G  G  LNFA+LWCVGATSATTYAVV +VN  P ++LGY LF  S I+ +  EF++V++ GGF+YS AK++
Sbjct:   26 AVSSSLSYSFCSVSMVMSNKLLAFTYKSDMAFLVVVGQCLVATILVEAVRRMGYASYDPFNFSTARRWLPVSICFSAMLFTSFKALEVMNVPMVTVFKNLTNIVIVTGDWWFFQQAASWLVMFSMAVMVFGALFASYNDLDFNPWGYFWMVANCCTTAGYVLYMKHATKSIKLPRFGMVFYNNLLTTCLLTPAAFMMGD-FTI-------FWTTPQLRTVTYMTALLFSGVVGVLLNFASLWCVGATSATTYAVVGSVNVIPTALLGYQLFD-SAISTQMGEFMLVSMIGGFMYSFAKLQ 316          
BLAST of mRNA_H-canaliculatus_F_contig1295.2453.1 vs. uniprot
Match: A0A836C853_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C853_9STRA)

HSP 1 Score: 277 bits (709), Expect = 3.730e-86
Identity = 163/382 (42.67%), Postives = 223/382 (58.38%), Query Frame = 1
Query:  241 VANAISSCLALSFFSISMILANKYLAASFEAKLHLLPMAFQCFVAVVLVEASRMKGWVQYEPFNMATAMRWFPIAIFFCTMLLSSFLSMQYMNVPMITVFKSLTNLIIVTGDFFWHKQVATPLVLLSLAVMTGGAILASWSDIEFSAWGYFWMSANCFATASYVLTMKFATRTMKLPKFGMVFYNNLLGFLIMLPVAICFGEVF----TMDSVGID-------------------------GFLDRQDLHTA------------------------------------KYLSINLFAGAAGFFLNFAALWCVGATSATTYAVVNTVNNFPVSILGYFLFPGSTI--------------TLKQWEFIVVNIFGGFIYSAAKIK 1149
            V  A+ SCLA S  S++M+LANK LA+SF+A   +L + FQC VAV+LVE SR   WV+    +M  AM+W P+ +FFC ML +SF+++++MNVPM+TVFK+LTN+IIV GD+ ++ Q  T L+L SL VM  GA LA   D+E +AWGY WMSANC  TASY+L MK+ATR++KL +FGMVFYNNLLGF+++ PVA+   EV      + SV +                          G + R DL T                                      ++ +NLFAGAAGF LNFA+LWCVGATSATTYA+V +VN  P+ +LG+ LF    +              T +   ++ +++ GGF+YS AK++
Sbjct:    9 VRAALLSCLAYSSCSLTMVLANKALASSFDANFPILMVVFQCLVAVLLVETSRRHQWVENYALDMKLAMQWVPVNLFFCAMLFTSFMALKWMNVPMVTVFKNLTNVIIVWGDWHFYNQSVTLLILASLGVMVFGAALAGKDDMESNAWGYIWMSANCVTTASYILYMKYATRSIKLTRFGMVFYNNLLGFVLLAPVALAASEVTGALCALQSVDVGVPLTHSANEDLWFTGGKEIRLGEVIGAVARPDLWTLLXXXXXXXXXXXXXASASLSXXXXXXXXXXXXXXXXXFMGLNLFAGAAGFCLNFASLWCVGATSATTYAIVGSVNKVPMMVLGWMLFKSPIVXXXXXXXXXXXXXXTAQSALYMTISLTGGFMYSWAKVR 390          
BLAST of mRNA_H-canaliculatus_F_contig1295.2453.1 vs. uniprot
Match: A0A7S2SW66_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SW66_9STRA)

HSP 1 Score: 270 bits (690), Expect = 4.230e-85
Identity = 152/311 (48.87%), Postives = 213/311 (68.49%), Query Frame = 1
Query:  217 GGAKKMGEVANAISSCLALSFFSISMILANKYLAASFEAKLHLLPMAFQCFVAVVLVEASRMKGWVQYEPFNMATAMRWFPIAIFFCTMLLSSFLSMQYMNVPMITVFKSLTNLIIVTGDFFWHKQVATPLVLLSLAVMTGGAILASWSDIEFSAWGYFWMSANCFATASYVLTMKFATRTMKLPKFGMVFYNNLLGFLIMLPVAICFGEVFTMDSVGIDGFLDRQDLHTA-KYLSINLFAGAAGFFLNFAALWCVGATSATTYAVVNTVNNFPVSILGYFLFPGSTITLKQWEFIVVNIFGGFIYSAAKI 1146
            G AK +G +A+ + SCLA S  SI+M+L+NK LAA F   + +L +  QC  AV+LVEASR+ G V Y+PF  + A+RW P+ + F  ML++SF S +++NVP+ITVFK+LTN++IV GD++WH Q  T  ++ +  VM  GA+ A+ +D+ FS  GY WM  NC +TASYVL MK AT+++ + KFGMVFYNNLL   ++LP+A   GEV        D  L   D+ T+  +L +N+ AG+ GFFLN A+LWCV ATSATTYA+V +VN  PV++LG FLF  + I+ +   +I V++ GGFIYS  K+
Sbjct:    9 GDAKSIG-MASQLLSCLAYSLCSITMVLSNKALAAVFHVDIPVLLVVMQCSFAVLLVEASRIMGIVSYQPFQSSVALRWLPVNLCFVVMLMTSFRSFKFLNVPIITVFKNLTNILIVAGDWYWHGQRITLGIIAAFGVMVVGAVFAAKNDVLFSFEGYCWMLGNCLSTASYVLYMKTATKSVDISKFGMVFYNNLLSVPLLLPLAFGLGEV--------DTALANLDIITSLNFLFVNIVAGSMGFFLNLASLWCVSATSATTYALVGSVNKIPVALLGAFLFDAA-ISSQGAIYIGVSMCGGFIYSYVKL 309          
BLAST of mRNA_H-canaliculatus_F_contig1295.2453.1 vs. uniprot
Match: A0A7S0F6U4_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7S0F6U4_9STRA)

HSP 1 Score: 270 bits (689), Expect = 6.380e-85
Identity = 148/320 (46.25%), Postives = 206/320 (64.38%), Query Frame = 1
Query:  202 NSSSQGGAKKMGEVANAISSCLALSFFSISMILANKYLAASF----EAKLHLLPMAFQCFVAVVLVEASRMKGWVQYEPFNMATAMRWFPIAIFFCTMLLSSFLSMQYMNVPMITVFKSLTNLIIVTGDFFWHKQVATPLVLLSLAVMTGGAILASWSDIEFSAWGYFWMSANCFATASYVLTMKFATRTMKLPKFGMVFYNNLLGFLIMLPVAICFGEVFTMDSVGIDGFLDRQDLHTAKYLSINLFAGAAGFFLNFAALWCVGATSATTYAVVNTVNNFPVSILGYFLFPGSTITLKQWEFIVVNIFGGFIYSAAKIK 1149
            N  S+G +     ++  + +C A +F S+SM+L NK LA+S+    E  L+LL + FQ  VAVV VE  R   WV+Y P ++    +W P+  FFC ML +   S+++ +VPM+T+FK++TN+I   GD+ +    A PLVLL+  VM  GA+ A+W+DI     G  WM+ANCF+ A+YVL MK+AT+ +K+PKFGMV+ NN+L    +LP A+  GEV T        FL  Q LHT  Y S NLFAG  GFFLNFA+L CV AT  TTYA+V ++N  PV+I+GY +F  S IT + W FI V++ GGF+YS AK++
Sbjct:    4 NEKSRGDSAATALISQPLVACGAYAFCSVSMVLTNKSLASSYNHLIEGDLNLLLVVFQAIVAVVAVEGCRKMKWVEYPPASLDLMKQWAPVNFFFCLMLFTGMGSLEHNSVPMVTIFKNVTNMITFFGDYMYFDAKAEPLVLLAFGVMLSGAVAAAWNDISVGITGLMWMAANCFSCAAYVLYMKYATKNIKVPKFGMVYLNNVLCVCFLLPAALIRGEVTT--------FLSSQALHTFDYTSKNLFAGLIGFFLNFASLNCVSATGPTTYAIVGSMNKIPVAIIGYVIFD-SKITPETWMFISVSMAGGFLYSYAKLR 314          
BLAST of mRNA_H-canaliculatus_F_contig1295.2453.1 vs. uniprot
Match: A0A7S1D394_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D394_CYCTE)

HSP 1 Score: 267 bits (683), Expect = 1.270e-83
Identity = 145/306 (47.39%), Postives = 198/306 (64.71%), Query Frame = 1
Query:  244 ANAISSCLALSFFSISMILANKYLAASF----EAKLHLLPMAFQCFVAVVLVEASRMKGWVQYEPFNMATAMRWFPIAIFFCTMLLSSFLSMQYMNVPMITVFKSLTNLIIVTGDFFWHKQVATPLVLLSLAVMTGGAILASWSDIEFSAWGYFWMSANCFATASYVLTMKFATRTMKLPKFGMVFYNNLLGFLIMLPVAICFGEVFTMDSVGIDGFLDRQDLHTAKYLSINLFAGAAGFFLNFAALWCVGATSATTYAVVNTVNNFPVSILGYFLFPGSTITLKQWEFIVVNIFGGFIYSAAKIK 1149
            A   S+C+  SF S+SM+L NK LA+S+    +  L++L + FQ   AV  VE  +   WV+Y  FNM TA  W P+ + FC ML +   S+Q+ +VPM+T+FK++TN+++  GD+++       LV ++ AVM GGAI A+W DI  +  G FWM ANC ATA Y+L MKFAT+ +KL KFGMVFYNN+L  L +LP +I  GEV  +        L+ + +HT  Y   NLFAG  GFFLNFA+L CV AT  TTYA+V ++N  PV+ILGY LF    IT + W FI +++ GGF+YS AKI+
Sbjct:   38 AKVASACMMYSFCSVSMVLTNKSLASSYNQLIDGDLNVLLVVFQAITAVGCVELCKRLKWVEYPNFNMRTAKLWAPVNVLFCLMLFTGMASLQFNSVPMVTIFKNITNIVVTCGDYYFFGTSVESLVAMAFAVMLGGAIAAAWHDIYITWVGLFWMCANCLATAGYILYMKFATKNVKLSKFGMVFYNNVLCTLFLLPASIFRGEVTLL--------LETEAIHTWDYFFKNLFAGFIGFFLNFASLNCVAATGPTTYAIVGSLNKVPVAILGYILFDNK-ITPESWFFICISMCGGFLYSYAKIQ 334          
BLAST of mRNA_H-canaliculatus_F_contig1295.2453.1 vs. uniprot
Match: A0A7S4MX17_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MX17_9STRA)

HSP 1 Score: 267 bits (683), Expect = 3.580e-83
Identity = 142/302 (47.02%), Postives = 197/302 (65.23%), Query Frame = 1
Query:  253 ISSCLALSFFSISMILANKYLAASF----EAKLHLLPMAFQCFVAVVLVEASRMKGWVQYEPFNMATAMRWFPIAIFFCTMLLSSFLSMQYMNVPMITVFKSLTNLIIVTGDFFWHKQVATPLVLLSLAVMTGGAILASWSDIEFSAWGYFWMSANCFATASYVLTMKFATRTMKLPKFGMVFYNNLLGFLIMLPVAICFGEVFTMDSVGIDGFLDRQDLHTAKYLSINLFAGAAGFFLNFAALWCVGATSATTYAVVNTVNNFPVSILGYFLFPGSTITLKQWEFIVVNIFGGFIYSAAKI 1146
            I +C    F S+SM++ NK LA+S+    E  L+LL + FQ FVAV+ VE  +   WV+Y  F+  TA +W P+ I FC ML +   S+Q+ +VPM+TVFK++TN++I  GD F+       LV+++  +M GGA+ A+W+D+  ++ G FWM  NCF TA YVL MKFAT+ +KL KFGMVFYNN+L  + +LPV I  GE+ T        F++   +HT  Y   N FAG  GFFLNFA+L CV  T  TTYA++ ++N  P+++LGYF+F  STIT   W FI V++ GGF+YS AKI
Sbjct:   74 IFACSLYCFCSVSMVIVNKSLASSYNHLIEGDLNLLLVVFQAFVAVIAVEICKKLKWVEYPGFDFKTARQWAPVNIMFCGMLFTGMASLQHNSVPMVTVFKNITNIVISIGDLFFFGSRVEILVIVAFGIMLGGAVSAAWNDVHVTSQGVFWMCMNCFCTAGYVLYMKFATKNVKLSKFGMVFYNNILCMIFLLPVTIINGEMVT--------FINTDKIHTMDYFLKNTFAGFVGFFLNFASLNCVSHTGPTTYAILGSLNKIPIAVLGYFIFD-STITPDTWFFIGVSMCGGFLYSYAKI 366          
BLAST of mRNA_H-canaliculatus_F_contig1295.2453.1 vs. uniprot
Match: A0A1Z5JIF2_FISSO (GDP-mannose transporter n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JIF2_FISSO)

HSP 1 Score: 263 bits (673), Expect = 6.200e-82
Identity = 147/304 (48.36%), Postives = 196/304 (64.47%), Query Frame = 1
Query:  250 AISSCLALSFFSISMILANKYLAASF----EAKLHLLPMAFQCFVAVVLVEASRMKGWVQYEPFNMATAMRWFPIAIFFCTMLLSSFLSMQYMNVPMITVFKSLTNLIIVTGDFFWHKQVATPLVLLSLAVMTGGAILASWSDIEFSAWGYFWMSANCFATASYVLTMKFATRTMKLPKFGMVFYNNLLGFLIMLPVAICFGEVFTMDSVGIDGFLDRQDLHTAKYLSINLFAGAAGFFLNFAALWCVGATSATTYAVVNTVNNFPVSILGYFLFPGSTITLKQWEFIVVNIFGGFIYSAAKIK 1149
            AI+SC   SF S+SMIL NK LA+S+    +  L++L + FQ  +A V VE  RM  WVQY P N  TA  W P+ +FFC ML +  +S++  +VPM+TVFK++TN+I   GD+ +       L + + AVM  GA+ A+ +DI  +A G FWM ANC AT+SYVL MKFAT+ +KL KFGMVF NN+L   ++LPVA   GE+ T        FL+ + +HT  Y   N FAG  GFFLNFA+L CV  T  +TYA+V ++N  PV+ILGY +F  S I  K W FI V++ GGF+YS AKI+
Sbjct:   53 AIASCTFYSFCSVSMILVNKSLASSYNHLIDGNLNVLLVVFQAIIAAVSVEVCRMMHWVQYPPLNWETARAWAPVNVFFCLMLFTGMVSLETNSVPMVTVFKNVTNIITTAGDYIFFGSQPEGLAMAAFAVMFLGAVAAAQNDIHVTATGLFWMVANCLATSSYVLYMKFATQNIKLSKFGMVFVNNVLCVALLLPVAFLNGELAT--------FLNAEQVHTWDYAGKNAFAGFIGFFLNFASLHCVSVTGPSTYAIVGSLNKIPVAILGYLIFD-SVIDSKTWFFISVSLCGGFLYSYAKIR 347          
BLAST of mRNA_H-canaliculatus_F_contig1295.2453.1 vs. uniprot
Match: A0A7S2R176_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R176_9STRA)

HSP 1 Score: 259 bits (663), Expect = 1.410e-80
Identity = 141/304 (46.38%), Postives = 195/304 (64.14%), Query Frame = 1
Query:  250 AISSCLALSFFSISMILANKYLAASF----EAKLHLLPMAFQCFVAVVLVEASRMKGWVQYEPFNMATAMRWFPIAIFFCTMLLSSFLSMQYMNVPMITVFKSLTNLIIVTGDFFWHKQVATPLVLLSLAVMTGGAILASWSDIEFSAWGYFWMSANCFATASYVLTMKFATRTMKLPKFGMVFYNNLLGFLIMLPVAICFGEVFTMDSVGIDGFLDRQDLHTAKYLSINLFAGAAGFFLNFAALWCVGATSATTYAVVNTVNNFPVSILGYFLFPGSTITLKQWEFIVVNIFGGFIYSAAKIK 1149
            AI SC    F SISM+L NK LA+S+    +  L++L + FQ  +AV+ VE  +   WV+Y  FNM TA +W P+ I FC ML +   S+Q  +VPM+T+FK++TN+    GD+++        V+LS +VM  GA+LA+ SD E +  G FWM +NCFATA Y+L MK+AT+ +KL KFGMVFYNN+L  L +LPVA   GE+ T        FL    +H+  Y   N FAG  GFFLNFA+L CV  T  TTYA+V ++N  P++ LGYF+F   T++  +W+FI  ++ GGF+YS AKI+
Sbjct:   43 AILSCALYCFCSISMVLVNKSLASSYNDLIQGDLNVLLVVFQAIIAVIAVETCKKMKWVEYPTFNMRTARQWAPVNIMFCLMLFTGMASLQVNSVPMVTIFKNITNIFCSFGDYYFFGSTVDRFVILSFSVMLLGALLAAGSDFEMNPVGIFWMISNCFATAGYILYMKYATKNVKLTKFGMVFYNNVLCILFLLPVATINGELLT--------FLRTNAIHSFDYFWKNGFAGFVGFFLNFASLNCVANTGPTTYAIVGSLNKIPITFLGYFMFH-DTVSPDKWKFIAFSMSGGFLYSYAKIR 337          
BLAST of mRNA_H-canaliculatus_F_contig1295.2453.1 vs. uniprot
Match: A0A7S1ZAE0_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZAE0_9STRA)

HSP 1 Score: 258 bits (660), Expect = 4.760e-80
Identity = 152/329 (46.20%), Postives = 209/329 (63.53%), Query Frame = 1
Query:  181 SVPRIGDNSSSQGGAKKMGEVA--NAISSCLALSFFSISMILANKYLAAS----FEAKLHLLPMAFQCFVAVVLVEASRMKGWVQYEPFNMATAMRWFPIAIFFCTMLLSSFLSMQYMNVPMITVFKSLTNLIIVTGDFFWHKQVATPLVLLSLAVMTGGAILASWSDIEFSAWGYFWMSANCFATASYVLTMKFATRTMKLPKFGMVFYNNLLGFLIMLPVAICFGEVFTMDSVGIDGFLDRQDLHTAKYLSINLFAGAAGFFLNFAALWCVGATSATTYAVVNTVNNFPVSILGYFLFPGSTITLKQWEFIVVNIFGGFIYSAAKIK 1149
            SVPR GD SSS+GG+K   E     A+ +C   S  S+SMIL NK LA+S    F+  L++  +  Q  VAV+ VE  +    V+Y  FNM TA  W P+ IFFC ML +   S+QY +VPM++VFK++ N+++  GD ++      PL+L S  +M GGA+ A+ +D++ S  G FWMSAN  +TA Y+L MKFAT+ +KL KFGMVFYNN+L  + +LPV I  GE+        + F++ + LH+  Y   N F+G  GFFLNFA+L CV AT  TTYA V T+N  P+S+LGY LF    IT + W +I V++ GGF+YS AKI+
Sbjct:   27 SVPR-GD-SSSKGGSKTRSEAGAGKALMACTMYSGCSVSMILVNKSLASSYNHLFDGSLNVFLVVVQAVVAVICVEICKKMKLVEYPSFNMQTAKLWAPVNIFFCAMLFTGMASLQYNSVPMVSVFKNINNVVVTFGDRYFFGVRVEPLILASFLLMLGGAVAAASNDLQASPAGIFWMSANVVSTAGYILYMKFATKNVKLSKFGMVFYNNVLCTVFLLPVIILNGEM--------NIFMNTEALHSVDYFVKNFFSGFVGFFLNFASLNCVAATGPTTYATVGTLNKIPISLLGYVLFD-DIITAQTWMYITVSMLGGFLYSYAKIR 344          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1295.2453.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L2R8_9PHAE1.120e-19880.21TPT domain-containing protein n=2 Tax=Ectocarpus T... [more]
D8LTL4_ECTSI3.230e-9451.00TPT domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A836C853_9STRA3.730e-8642.67Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2SW66_9STRA4.230e-8548.87Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S0F6U4_9STRA6.380e-8546.25Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A7S1D394_CYCTE1.270e-8347.39Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S4MX17_9STRA3.580e-8347.02Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
A0A1Z5JIF2_FISSO6.200e-8248.36GDP-mannose transporter n=2 Tax=Fistulifera solari... [more]
A0A7S2R176_9STRA1.410e-8046.38Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S1ZAE0_9STRA4.760e-8046.20Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1295contigH-canaliculatus_F_contig1295:19355..27596 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score573.2
Seed ortholog evalue9.3e-161
Seed eggNOG ortholog2880.D7G4P6
Preferred nameVRG4
KEGG koko:K14835,ko:K15356
KEGG TC2.A.7.13
GOsGO:0000139,GO:0000271,GO:0003674,GO:0005215,GO:0005338,GO:0005458,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005783,GO:0005794,GO:0005975,GO:0005976,GO:0006464,GO:0006486,GO:0006487,GO:0006807,GO:0006810,GO:0007163,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009272,GO:0009987,GO:0010383,GO:0012505,GO:0015780,GO:0015931,GO:0015932,GO:0016020,GO:0016021,GO:0016051,GO:0019538,GO:0022857,GO:0030447,GO:0030448,GO:0031090,GO:0031224,GO:0031984,GO:0033692,GO:0034637,GO:0034645,GO:0036080,GO:0036211,GO:0040007,GO:0042546,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043413,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0051179,GO:0051234,GO:0051278,GO:0055085,GO:0070085,GO:0070589,GO:0070592,GO:0071554,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071852,GO:0071966,GO:0090480,GO:0098588,GO:0098791,GO:1901135,GO:1901137,GO:1901264,GO:1901505,GO:1901564,GO:1901566,GO:1901576,GO:1990570
EggNOG free text desc.nucleotide-sugar transmembrane transporter activity
EggNOG OGsCOG5070@1,KOG1444@2759
EC2.1.1.310
COG Functional cat.GOU
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko02000,ko03009
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionGDP-mannose transporter
Ec32 orthologEc-00_007820.1
Exons8
Model size1149
Cds size1149
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1295.2453.1prot_H-canaliculatus_F_contig1295.2453.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig1295 19355..27596 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929025.7461064-CDS-H-canaliculatus_F_contig1295:19354..196631622929025.7461064-CDS-H-canaliculatus_F_contig1295:19354..19663Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1295 19355..19663 +
1696845651.9102845-CDS-H-canaliculatus_F_contig1295:19354..196631696845651.9102845-CDS-H-canaliculatus_F_contig1295:19354..19663Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1295 19355..19663 +
1622929025.7617633-CDS-H-canaliculatus_F_contig1295:23777..238311622929025.7617633-CDS-H-canaliculatus_F_contig1295:23777..23831Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1295 23778..23831 +
1696845651.929528-CDS-H-canaliculatus_F_contig1295:23777..238311696845651.929528-CDS-H-canaliculatus_F_contig1295:23777..23831Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1295 23778..23831 +
1622929025.7731187-CDS-H-canaliculatus_F_contig1295:24180..243451622929025.7731187-CDS-H-canaliculatus_F_contig1295:24180..24345Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1295 24181..24345 +
1696845651.9395764-CDS-H-canaliculatus_F_contig1295:24180..243451696845651.9395764-CDS-H-canaliculatus_F_contig1295:24180..24345Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1295 24181..24345 +
1622929025.7882197-CDS-H-canaliculatus_F_contig1295:24835..249841622929025.7882197-CDS-H-canaliculatus_F_contig1295:24835..24984Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1295 24836..24984 +
1696845651.9513614-CDS-H-canaliculatus_F_contig1295:24835..249841696845651.9513614-CDS-H-canaliculatus_F_contig1295:24835..24984Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1295 24836..24984 +
1622929025.8099518-CDS-H-canaliculatus_F_contig1295:25359..254871622929025.8099518-CDS-H-canaliculatus_F_contig1295:25359..25487Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1295 25360..25487 +
1696845651.966113-CDS-H-canaliculatus_F_contig1295:25359..254871696845651.966113-CDS-H-canaliculatus_F_contig1295:25359..25487Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1295 25360..25487 +
1622929025.8239615-CDS-H-canaliculatus_F_contig1295:25935..260671622929025.8239615-CDS-H-canaliculatus_F_contig1295:25935..26067Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1295 25936..26067 +
1696845651.975036-CDS-H-canaliculatus_F_contig1295:25935..260671696845651.975036-CDS-H-canaliculatus_F_contig1295:25935..26067Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1295 25936..26067 +
1622929025.8418498-CDS-H-canaliculatus_F_contig1295:26545..266371622929025.8418498-CDS-H-canaliculatus_F_contig1295:26545..26637Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1295 26546..26637 +
1696845651.985399-CDS-H-canaliculatus_F_contig1295:26545..266371696845651.985399-CDS-H-canaliculatus_F_contig1295:26545..26637Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1295 26546..26637 +
1622929025.8581002-CDS-H-canaliculatus_F_contig1295:27476..275961622929025.8581002-CDS-H-canaliculatus_F_contig1295:27476..27596Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1295 27477..27596 +
1696845652.002291-CDS-H-canaliculatus_F_contig1295:27476..275961696845652.002291-CDS-H-canaliculatus_F_contig1295:27476..27596Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1295 27477..27596 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig1295.2453.1

>prot_H-canaliculatus_F_contig1295.2453.1 ID=prot_H-canaliculatus_F_contig1295.2453.1|Name=mRNA_H-canaliculatus_F_contig1295.2453.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=383bp
MLDGHKPGASSKSSPSKLPGSQSLAPSPFPQAIEDVELDDRLDDNELSES
ETLDKEGRMGSVPRIGDNSSSQGGAKKMGEVANAISSCLALSFFSISMIL
ANKYLAASFEAKLHLLPMAFQCFVAVVLVEASRMKGWVQYEPFNMATAMR
WFPIAIFFCTMLLSSFLSMQYMNVPMITVFKSLTNLIIVTGDFFWHKQVA
TPLVLLSLAVMTGGAILASWSDIEFSAWGYFWMSANCFATASYVLTMKFA
TRTMKLPKFGMVFYNNLLGFLIMLPVAICFGEVFTMDSVGIDGFLDRQDL
HTAKYLSINLFAGAAGFFLNFAALWCVGATSATTYAVVNTVNNFPVSILG
YFLFPGSTITLKQWEFIVVNIFGGFIYSAAKIK
back to top

mRNA from alignment at H-canaliculatus_F_contig1295:19355..27596+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1295.2453.1 ID=mRNA_H-canaliculatus_F_contig1295.2453.1|Name=mRNA_H-canaliculatus_F_contig1295.2453.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=8242bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1295:19355..27596+ (Hapterophycus canaliculatus Oshoro5f female)
ATGCTCGACGGACACAAGCCTGGCGCAAGCAGCAAGAGCAGTCCATCTAA GCTGCCCGGATCGCAATCCCTTGCTCCGTCGCCTTTCCCACAAGCTATCG AAGACGTTGAGCTAGACGACCGTCTGGACGACAACGAACTCAGCGAAAGC GAAACTCTGGACAAAGAGGGAAGGATGGGATCGGTCCCCCGAATCGGCGA CAACAGTAGCAGCCAAGGAGGCGCGAAAAAGATGGGAGAGGTCGCGAACG CCATTTCCTCTTGCCTGGCGTTATCTTTCTTTTCCATCTCGATGATCCTC GCCAACAAGGTGCGAAGGCTGCGGTTGGGGATGTGGATGTGGGTGTCGTT GGATTGTTGGCGTACGTGTGATCGGTCATGTTGAGATTGTGTTCCTAGAA TCGACGAGCATCGCTCTGGTAGGACGCCAGGTGTCGGATCCACGCGTGAT GCCTCTACAGCGGAAGAGGCCTAATAGTTGCAGCGTGGCCAGGTATCCAA GCGCGGTGCGTGCGGATAGGTTGGCCCTTGGTGAGCTTGTGGCGCACGTT ACTCTCATTTCTCCGTACTCGGTACTCGCGTGTCTTGGGGCGGAACAAAA AGATGTAAAAGTTCTTGTTTTCTCCAATCCATTTTTTGAGGATGAGATGC CTCGGTTTTTCTCTCACGACACCACAATCTCAATCTCTACCTCGATCACT TCGGGGTGTGGAAACTTTTCGTTCTCTATGAAAGCGTTTTATGCCCAGCA TGGAGTTCCGGAAAGAAGCGCTGACGGGCAGTCGCACTTTCTCCTGTGTT TTAAACTGTCAGCGTGACGGGGTTCGCTGTGGTGGAGTGGCCAACCAACT TTTTAACTTTCCAAGAGGGTTGCATTTCTCCGCAGTTTGTCTCCTCCTCA CCGTCTGTTTCGGTTGTGTGTCGTCGTGTGTCGCCGGGTCGAAAGCTGAC GCGCCAGAGGCGACCCCGGCCCACGGTCATCTTCTCTCGGGATTTCTCGA TACAACGGCTCCCGCTTGCGTCGCGCAGGCGACCTTTCCCTCCCCGTGAG AGACGGGGTCTCACACTAGCCTTATCCTAAAAGTACTGGTCCCGGCGGGA TTTGATTTGAAAAGGAAACAGCAGTGGTGCCCCTCTTCTACCCGGTGAAG TCCCCCAGTTCGTGGTCTGTTCTTTCAGCCACAAGTCATCCGGGTCATAC GACATACCAAGGTATATACATGAAGCCTTTCCAGTTCGTGGTCTGTTCTT TCAGCCACAAGTCATCCTGGTCACATACGTATATACACAGAGCCCTACTA ACCTCTTTTTCGTGGAAATAGCCAAAAAAGGGCCGATGGGTGATTCAGCA AGAAGATGCGGAAGGTCGAGCACACGCACGCCTCGCGCGACCGCGGCAGT GTTCTTCTCCATCGCTGTCTGCCGCGGCGTCGTTCGGCTGGCTGCCGGAA AGTCGCCGCTTGCCGTACATGCGGCTTTGCATAGACCCGATTTTTGTCCC TACAGCCAAGGGACGTGCTTCGTTCAACCGGTAGAAACGACGACCTGAAG GTCGTGATGTACGTATCTATCACTTGTCTACCTAATCCTGGACACGAAGC GTGAGAGCCGATCGATTTCGTCTTTCGGGTGTCGTCCATCGCGTCGTTGC CGGCAGTCGCTGTATACACGCGCACACGACCGAAAACTTCCGACGCGGGG GAGTGGCCGCATCATGCCGCGCGGTTCGGGAAGGTTACAAGTACTTGTAG CGTCTTCTCTCGGACATCTTTCACCAACATTTAGTGTGCAATCTTCCCGC AAGACAAGACTACAATTGTCGGCTTGTAGCGTCCTGGAAACTGACACTAT CAAACCAGGAAAATGCACCCGCAACGACCGCAGCGCCTGCGGTTGAGTGT CTGGAATTTCTTGGTGAAGCACACCGAAGTCTCTTGTTCCGATGCCGTTG AGCGCTGAGCGAGGGAGCTTTTGTCTCGTTATTAAAAAAAAAACTCTTGT GTCTCTGGAGAGCTCGGGCTCGTCCGACACCGCCGCTTCTTTCCACCGGA TCTCCTTTTTAGTCCTGTGTTGCAGACTTTGTCCATGCCGAGCGGGAGGC TCAGGGATTATCAGGGAGCACCTGGACACCTGGACCGTCGTGAGGTGATG GTTGGTATCGAAACTGCCTTGGGCATGTCGAGCTCACGTGGTTGCGTATG CTCTCGAACCAGGCCACCCAATGGGAGGGGGTACTCCTGTACAGTACAGA TCCACAAGAAATTGCGTAGCTCTCACCCTGGTTTATTATTTTCCCTTCTT GTCACAGATGATACCACTGCTGCTTCTTATTTACTTGTAGAGCTACAAGG TGTTTGTTTTTCCGTTCGTCGGGGCCAGAAGCGGGTGACCCTCCGGTTCG GTATTCGTCCGCCAGAAAACACCGGCGGGTGTGATCGGACGTGTGCGTGG TCGCCGAGCCCGTCCTTGTAGCGGTGGATACGAACGAAAATAGTGAGGAG GTGGAATCGAGATGCTACCCACCGCGGGAGAGGATCCCAGGTTGCGAAGT TGTCACAACACGCCGCCGAGATGGCGGTCCGAAGACAGCCAAACGAAAAT CTTGTACAAATTGTACAGCAGTCGCAAAGCTTGGCCCGTGAATCTCTCCT CGAGCAGGAGGGTCACGAGGAGGAAGTCAAGGGCGAAGAAACTCATGACT CGTGACAGCAGGAGTTTTGCACCTGGCATGGGATGTTGCTGTGTGTGCCC CGACTGAGCCAACGGAATCTCGAACAAAAGAATTCGGCAAGTTCGCGATA TGTTGGTCCGGCATCATAGGTGCGTGATTGCAGCAGCAGTGCTGTCGGTT TAGTTTTCGGTCAAACTGCTGCTGCTGCTGCTGCTGCTGCTGTGCTTGGC AACTCCCTGTCAACATTGGCTGCTCTCGGTATCGAACACCGCTTGTTGGC ATCTATGCAGATGCGTGCGGATATGTGTTACCATCCCATTCGTGATGGAT CGGTCCACCCCTGTGCGGTACCTGTTGCTCCCGCCCGGCGTTAGGGCGTG GCTTCTCCGCACTTTTTCAGACATAGAACGTGGAACTTCGAACACTTTCT TAGGAATTGTACGAGTATTTCCATTCGACTTACGTGGGGTTTATTGTTTT GGCTTTCCCGCGGCATGAAAAATACGTCGAGTCCAACTACTGCAGCTGCA GTTGTTGCAACAAATTGCCCAACACGGAAGAAGGAAAGAAAAGAGAAGTG TCCGTAGGGAACGAACGAGCTGATGGAAGAGGGGGGGAGTTGGACACATG GTCATACGAAGGGACCATGGTACATGGAGTCGTAAATTTTGAGACCGATT CCGAACCGAGGAGCATCCCGAAGGGCCCGTACCAACCCCATCTTCACTGC GATGACGCGTTGCCCGCTGGAATTCGACTGGTGACTACCGAAGGTGGGAT AAAAAAAGATCTCGTCTCTGTCTCGTCGCTTGTTGAGAGAAGACCGAGCC GGCATAACATATTCCTACAAATGACTTCTGATCAAGATCACTTTCGGGGC TGGCCTGGGGATCTCGCCCGGGACTTGTCGGTGGTCGTGCTGTCATCATC GTTGTCCACTCTTTTCCAACGAGACACAGAGGAGCACACCACAATCAGTT TAGGTGCCGGAACCGGTTATTTGTGAACCGCTTTGTGTCGTAAAGCCACG CCCTTACAGCAGTGCACAAAACGAAGAAGGTCTGAAAAAGGTCAACACAA GCTTTGATGTTTTTGGTTGATGGAGATATGCTGAGAAACATGATTCTCCG CCCTCCGCTCCCCGGACTCTTAGATCATCGATCCGCATCAGCCGCTGTAA GCAGCACCGCCTCGGTGTATCGAATCGAACCCCGTTAGATGCATGGCGAA CGGACTCTGCCGAAGCAATGTTCGTTGCTCTGTAGTCGTGACTGGTGCTG CCGCGGACAACTTCGAGTCTCCCCATACCCCGCATGTGCCTTGTGCCACG CATTTTTCCGTGGGCTTGCTGCCAGCACCCGCTTTGATACGTCTTCACAC GTGTTCACACGGTTGACTGCAAGGAATTTCGCTTCGGCTCCCCCGTCTCC CCCTCGTGGTGGCTGTATCTGCACGCTGACGACGCGACGCTTCCGGGACA GCGTCTCATTTCACGCCGCCTCTGCTCGGGAGACCTTTACACCCACTCGC ATCTCTGGGAAGTTTTCAGGAGAATTTCCGTGGCGATTGTTTTTGCTGTG TCTGTGTCTGCCGCTCGTCTTTGTTGTTCTGTTGCGGGCCCGCTGCGTCG TTGCTTGTCTGCTGCGGTTGCTTGACGTCGCGTTGCCCGGTGCTCTCGTC GTCCGACCTTACCCTTCTCTCTGCCCTCTGTCGTTTTCCGCGTCCACAAA ATTCCTCTCCCCGACGTGAATAGTACCTTGCGGCGTCGTTCGAGGCCAAG CTGCACCTCTTGCCTATGGCATTCCAGGTAAGATGGACTCGTTTACCTTC GAGAGGGTCGTTTTTGTAGTGCTGTAGTCCGCTTCGCTTTAGGTCGCGGT TACCCGGGCGTTTGGCAAAAGCTCTCGAGCGTCTGCAAATCCGTTCAGTT AAGCGAACACCCGCCATACTCTTTTTGTTCGTTGTGCCCTTCGTCGTTGT TTGAGCCACCGACGCCGCTACCGCTGCTTCATCCCCATGAGAGCGCGCAG CACCCCAACCCCACCACGACATGGACATGGACATGAGCGCTGGAACGGGC GCGACGCCTCTCACGTGTCTCTTGTGTCTGTTACTTCTCGCCATCCGTGT GCGTTGTTGCGCCCTTGGTCGAACAGTGCTTCGTGGCCGTGGTCCTGGTG GAAGCTTCCAGGATGAAGGGGTGGGTGCAGTACGAGCCGTTCAACATGGC CACGGCCATGAGGTGGTTCCCCATCGCCATCTTCTTCTGCACCATGCTGC TGTCGTCCTTCCTGTCCATGCAGTACATGAACGTTCCCATGGTGAGCTCG TTTGTGTCCTGAGGTCACCCACCTGTCGAGGAAAGGCTATCCTCGATGCT TGTTTCGTGTTCTCGTGTTGCTCGCCTCTCCCTCCATCCCAGCACCTCGT GCGTGGGTAGAATTCATGTTGACATGCATTGGTCGATTATTTCGCCGCAG AGGGGGGGGGTCTTGTTGTTTGACGTCTTACAGGTCTCCTCGCCCATCGT TCGAGCCACCGCAACACCGGCCGCGAGTAGCGGCAAGGCCGCCGTGTCTG TTGGCAATCCCTTGTTGTTGTCGTTCCTGCGTGCCGCAAAGGGAAGCTCG CCCGCCGAGCTGCAAAGCCTACCCGCCGCTGGCCCGCGCTCTTGAGTGTA GGACTGCGGCCGATTGTCCACCGACTGTCGCTCTGCGATCGCGAGGTCGC TCATCCCGCGCTCTTTGACATTCCGCCCTGCGTCCGTGCGCGCGTTGTCG CCGTCCTCGTGCGCGTTTTGTCTCCGTCCAGATCACCGTGTTCAAGAGCT TGACCAACCTCATCATCGTGACGGGAGACTTCTTCTGGCACAAGCAGGTG GCCACCCCCCTCGTGCTGCTCAGCCTGGCAGTCATGACGGGAGGCGCCAT CCTCGCGTCGTGGAGTGACATCGAATTCTCGTGAGTTTTCATGCTTGTGA AAACCACTGCGCGTGCGATGTCTCAGTAGCGTGGAGCATAAACAGCAGCA GCAGCAGCGGCGGCCGCAGCAGCAGCGGCGGACGGCGTCGAGAGCCGGAT CAACCGCTTCAAAGCTTAGCTTGACACCGAGAAGGATCCGTCATGAAAAA CTCCGATCGACGACCGAAACGAACGGCCGATCGGCGCTGCAGGACGCAAA ACACGGGTAGGTTTTTACACCGCGCGACGGTGTCGATTTCTCCTATCGAA ACCGGGCCATAGTCGGAATTTTGGCCAACTCCGCCTCGTTGACCCTGGCG CTTGTCCCGTCGGTGCTGCTTCTGTTTTTCCTGTTTGGTTTTCGCCTAAA CCAAGGGCGTGGGGGTACTTCTGGATGTCTGCCAACTGCTTCGCGACGGC CTCGTACGTGCTCACGATGAAGTTCGCCACGAGGACCATGAAGCTGCCTA AGTTCGGGATGGTCTTCTACAACAACTTGCTCGGTAGGTCTCGTATGCCT CTTGCAGGTGTTCGGTTGATGTTGATGCGCTTTGTTGCCGCACGCACTGT CATGCCGTTTAGACGGTGGCCGCCTGAGGGTCTCAGGAAGCTTTTAGGTG CTCCTACTGCATAAATGTGGCGTTCGGAAAGCCGTCTTCTATAGCCTCGC TCCCTCCTGTCAACCACGTACTCTGTAATGTGACGGAGTTAGCATCTCCT GTCCAGTACTGCCTTCGTTCGAGCAAAATTGGGGTAGCCCAGCACGATTC TGCAAAACCACGGCTTTTCTTACTCCTGGTCGCTCTCAATCATCGCAGAT CGGTGTTTCCAACAACGCATGACGCTTACCCCTTTCCACGTGCTGCGTTT CACTGTTTCATCTTCCTCGCTGCATCGAGATGACCATGATACGTTCTCAT GTGCCTGTTGAATTCCGCGTGCTGTGGTCAGGGTTCCTTATTATGCTGCC CGTGGCGATATGCTTCGGAGAGGTTTTTACCATGGACAGCGTCGGCATCG ACGGCTTCCTGGACCGCCAAGATCTCCACACGGCCAAGTACCTCTCCATC AACCTTTTTGCAGGTGCGTGAGGTTGAGAGGGGGCCGCTAAGGGAAGGGC TTGGTTGCGGTTGTGGGTCTTGAATAGAGGCTAGGTTGAACAGCAGTGTA ACCCGTCGTGTTGTTGCTGAGAAGGCCGTCCTTGGATTCGTCGACGGTGC TGCGTAGGGGAGGGAAAGAGAGAAGGTCTCACGTCTGGCCGCCTTTCCCT GCCCCGCGAAACCTCTCTTCTGAGGTAATACGATGCCTGCCGCCCATCCT TGTTTTTCGTCCCGGACGATTGTCTCGCTTCATTTTCTCCTTCGTTGAAG TCGCGTCCGCCGGGCAGCAGCCTATCTCTGGTTACGCGACCGTTCACCGC GGGCTGGCCACATGTGTTTCCTGCTGATTGTAGTGTAAACCACCACCACC TTCATGACAGCTTCCATCCATCCAAAGCCGCGCTGAGCGCCAACGTTCGA ACCCTTGACCCTTGTGTTTTACTCTAACCCACCGCGCGCAGGCGCGGCTG GATTTTTCCTCAATTTCGCCGCTCTGTGGTGCGTCGGCGCCACCTCCGCC ACCACCTACGCCGTGGTGAACACCGTCAACAACGTGAGCAGCTGTCCATG TGCAGCCCGTTTCTTGTGCTCCGCGGTGACGTTTTTGCTGGCGCTTGCGA GCAATGCACGACCACCTTGCCACCCTGCCGCGCCAACGGCTTCGCTTCTT GAGGACGAGCACGAATCGAGCTGCATTTTCTTTTTCTTCCCACAAGTACA GTTGGGTCGTGTTTCGTCAGCTTTTGGTCTGCCTGATTGCGGCAGTTCGA TCAGTTGTGTCGACGGATGTGGATGCTGCTGTCTAAGGCCGTCGACGCTA AAACATCGCTAGCGCAAACGCCACGGCCTGAGGTTGTCCCGCGTGTGGTT CTTAATGGAGGTCGGTGCTTACTGGCGTAACTGGATGAGCCCTCCGGCAA AAACCAGCTTTTCCCAGGAACCGTGCCGGCCGCATGATTTCCGCAGCGGC GCCAAGTTCTGCGTGCATGCGATCGCAGATCAGCAGCGTGTCGGTCTGTG TGGATAGGTTAGACGTGCGCGCTGTGCTGCTTGCTTGCTCTTGCCCGCCA CGTGATCCGTGCGCCGGGCCCGCGCAACGAGACAAGACGCCGGAGAGGAC ATGCATGCGACGGCCTCTGGCATGATCCCAAGAGCTTGCTCGTCGCTGCC GACGCCGCACGACGGCGTTCGTTTTCGTTCCCGTCTCGCCTCGGAAACTC TTGGTCGTTTCGTGTCCGGTTCGAATTGCGTCACACCATACCCTTGCTGC CGCTACCGCTGCTCCATCAGATCGTCTCGGCGCCACGGGATCTCACTTCT TTTTTTTTTCCTGTGTTGCGATCGCCGTTCTGGTTGTGTTCGCGTCGCCT CGTGTGCCCGTGGGATCCGCAGTTCCCCGTGTCCATCTTGGGGTACTTCT TGTTCCCCGGGAGCACCATCACCTTGAAGCAGTGGGAGTTCATCGTCGTG AACATTTTCGGGGGTTTCATCTACTCTGCCGCCAAGATTAAG
back to top

Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1295:19355..27596+

>mRNA_H-canaliculatus_F_contig1295.2453.1 ID=mRNA_H-canaliculatus_F_contig1295.2453.1|Name=mRNA_H-canaliculatus_F_contig1295.2453.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2298bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1295:19355..27596+ (Hapterophycus canaliculatus Oshoro5f female)
ATGCTCGACGGACACAAGCCTGGCGCAAGCAGCAAGAGCAGTCCATCTAA
GCTGCCCGGATCGCAATCCCTTGCTCCGTCGCCTTTCCCACAAGCTATCG
AAGACGTTGAGCTAGACGACCGTCTGGACGACAACGAACTCAGCGAAAGC
GAAACTCTGGACAAAGAGGGAAGGATGGGATCGGTCCCCCGAATCGGCGA
CAACAGTAGCAGCCAAGGAGGCGCGAAAAAGATGGGAGAGGTCGCGAACG
CCATTTCCTCTTGCCTGGCGTTATCTTTCTTTTCCATCTCGATGATCCTC
GCCAACAAGATGCTCGACGGACACAAGCCTGGCGCAAGCAGCAAGAGCAG
TCCATCTAAGCTGCCCGGATCGCAATCCCTTGCTCCGTCGCCTTTCCCAC
AAGCTATCGAAGACGTTGAGCTAGACGACCGTCTGGACGACAACGAACTC
AGCGAAAGCGAAACTCTGGACAAAGAGGGAAGGATGGGATCGGTCCCCCG
AATCGGCGACAACAGTAGCAGCCAAGGAGGCGCGAAAAAGATGGGAGAGG
TCGCGAACGCCATTTCCTCTTGCCTGGCGTTATCTTTCTTTTCCATCTCG
ATGATCCTCGCCAACAAGTACCTTGCGGCGTCGTTCGAGGCCAAGCTGCA
CCTCTTGCCTATGGCATTCCAGTACCTTGCGGCGTCGTTCGAGGCCAAGC
TGCACCTCTTGCCTATGGCATTCCAGTGCTTCGTGGCCGTGGTCCTGGTG
GAAGCTTCCAGGATGAAGGGGTGGGTGCAGTACGAGCCGTTCAACATGGC
CACGGCCATGAGGTGGTTCCCCATCGCCATCTTCTTCTGCACCATGCTGC
TGTCGTCCTTCCTGTCCATGCAGTACATGAACGTTCCCATGTGCTTCGTG
GCCGTGGTCCTGGTGGAAGCTTCCAGGATGAAGGGGTGGGTGCAGTACGA
GCCGTTCAACATGGCCACGGCCATGAGGTGGTTCCCCATCGCCATCTTCT
TCTGCACCATGCTGCTGTCGTCCTTCCTGTCCATGCAGTACATGAACGTT
CCCATGATCACCGTGTTCAAGAGCTTGACCAACCTCATCATCGTGACGGG
AGACTTCTTCTGGCACAAGCAGGTGGCCACCCCCCTCGTGCTGCTCAGCC
TGGCAGTCATGACGGGAGGCGCCATCCTCGCGTCGTGGAGTGACATCGAA
TTCTCATCACCGTGTTCAAGAGCTTGACCAACCTCATCATCGTGACGGGA
GACTTCTTCTGGCACAAGCAGGTGGCCACCCCCCTCGTGCTGCTCAGCCT
GGCAGTCATGACGGGAGGCGCCATCCTCGCGTCGTGGAGTGACATCGAAT
TCTCGGCGTGGGGGTACTTCTGGATGTCTGCCAACTGCTTCGCGACGGCC
TCGTACGTGCTCACGATGAAGTTCGCCACGAGGACCATGAAGCTGCCTAA
GTTCGGGATGGTCTTCTACAACAACTTGCTCGGGCGTGGGGGTACTTCTG
GATGTCTGCCAACTGCTTCGCGACGGCCTCGTACGTGCTCACGATGAAGT
TCGCCACGAGGACCATGAAGCTGCCTAAGTTCGGGATGGTCTTCTACAAC
AACTTGCTCGGGTTCCTTATTATGCTGCCCGTGGCGATATGCTTCGGAGA
GGTTTTTACCATGGACAGCGTCGGCATCGACGGCTTCCTGGACCGCCAAG
ATCTCCACACGGCCAAGTACCTCTCCATCAACCTTTTTGCAGGGTTCCTT
ATTATGCTGCCCGTGGCGATATGCTTCGGAGAGGTTTTTACCATGGACAG
CGTCGGCATCGACGGCTTCCTGGACCGCCAAGATCTCCACACGGCCAAGT
ACCTCTCCATCAACCTTTTTGCAGGCGCGGCTGGATTTTTCCTCAATTTC
GCCGCTCTGTGGTGCGTCGGCGCCACCTCCGCCACCACCTACGCCGTGGT
GAACACCGTCAACAACGCGCGGCTGGATTTTTCCTCAATTTCGCCGCTCT
GTGGTGCGTCGGCGCCACCTCCGCCACCACCTACGCCGTGGTGAACACCG
TCAACAACTTCCCCGTGTCCATCTTGGGGTACTTCTTGTTCCCCGGGAGC
ACCATCACCTTGAAGCAGTGGGAGTTCATCGTCGTGAACATTTTCGGGGG
TTTCATCTACTCTGCCGCCAAGATTAAGTTCCCCGTGTCCATCTTGGGGT
ACTTCTTGTTCCCCGGGAGCACCATCACCTTGAAGCAGTGGGAGTTCATC
GTCGTGAACATTTTCGGGGGTTTCATCTACTCTGCCGCCAAGATTAAG
back to top