prot_H-canaliculatus_F_contig12912.2430.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig12912.2430.1
Unique Nameprot_H-canaliculatus_F_contig12912.2430.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length649
Homology
BLAST of mRNA_H-canaliculatus_F_contig12912.2430.1 vs. uniprot
Match: A0A6H5JML9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JML9_9PHAE)

HSP 1 Score: 488 bits (1255), Expect = 5.020e-153
Identity = 379/685 (55.33%), Postives = 426/685 (62.19%), Query Frame = 0
Query:    1 MALLPKITSMMTTSYTGEVAAXXXXXXXXXXXAHTAASNTVDGSRHKVEKAAASASVSVMRPRVALSCLRVLCAVAGRAPWAAERVAREPGLLDVVREAFLEPSADGTLPFELSGALSEATSTLQQHXXXXXXXXXQGPTASKTPSSAARGGVRERGGD-AESSAPPA----ERSVALLAVRLARILVQSERGVALFVSRTPLLESTKGFLALGQGSPRPLPTLEAVQREALELWRCCLSYGIDVAAADTVVIVARGQGWWPGL--GSVA---------------TPPVAIADGAXXXXXXXXXXXXXXXDPP-PAAVESAPGIVGVGXXXXXXGG------GGRSLSPKLAFYRALHQLACACVLPPGRSDAAKANSAGPGGTKPAAGQSDRKRTGPG-KEEAEAAGTVLSLGGMKVAPESMADVGDTVDAAVEAALLWLLSAGRSGPEERGAKAGGTAERAQQAAAIHLVASWVERYRSMSRDAGRRASRHLESTVEDATVLFSTLLASRSQLLPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGLDWLSGVFRLGLACEKATPGEAAAALAAAPEVTCAALAGFLASA-----AVGTAGAXXXXXXXXXLP-GRFSRRLRRAEAGARWLGCRLTACGDAGRSAGVGRWRWPVLRRDCALQVCA 649
            MALLPKI S++  S  G+V+A                     GS H   +A A A+   +RPR ALSCLRVLCAVAGRAPWAAERVA EPGLLD VREAFLEP  DGTLP +LS A + AT+T Q             P   + P++ AR   + RGG   +++  P     +  +ALLAVRLAR+LVQS RGVAL +S+TPLL STKG+LALGQGS RPLP LEAVQRE LELWRCCLSYGIDVAAADTVV+VARGQGWWPGL  G V                T  V   DG XXXXXXXXXXXXXXX    P A +S P  VGVG      GG      GG S+ P+LAFYRALHQLACACVLPPG + A +  + G   T    G++     G G ++EAE      S+GG+ V PES ADVGDTVDAAVEA LLWLL + R G    G   GGTAE AQQAAA+HLVA W+ERY++MSR AGRRAS HLES  EDA VLFS+LLAS +  LP                   XXXXXXXXXXXXXX              AGLDWL GVFRLGLACE+A PGEAAAALA+APE T AAL  FLA+A     AV   GA          P   F RR+RRAEAGARWLGCRL A    G   G G W W  LRRDCALQ  A
Sbjct:  144 MALLPKIASVIK-SCAGQVSADGAQAGSDGGGGLGDM-----GSVHGAARATAEAAAVSLRPRAALSCLRVLCAVAGRAPWAAERVASEPGLLDAVREAFLEPRTDGTLPLDLSEA-APATTTKQLS-----------PAPPQEPATPARAEGKARGGGPGDANGCPXXXXXQEGLALLAVRLARVLVQSGRGVALALSQTPLLGSTKGWLALGQGSRRPLPALEAVQREVLELWRCCLSYGIDVAAADTVVLVARGQGWWPGLSVGGVGXXXXXXXXXAPLVADTVTVERGDGGXXXXXXXXXXXXXXXTAATPVAAKSLPVGVGVGGARSTSGGASGGSRGGDSVPPRLAFYRALHQLACACVLPPGGNAAGRNKNDG-AETAGGDGKAGVGAAGAGLRKEAEG----FSVGGVVVVPESWADVGDTVDAAVEAVLLWLLRSVRGGG---GVDGGGTAETAQQAAAVHLVACWMERYQAMSRTAGRRASGHLESIAEDAAVLFSSLLASSA--LPLMAAVAAAVTRGCDQSGGGXXXXXXXXXXXXXXSFSQRGVSSGEAVTAGLDWLCGVFRLGLACERAMPGEAAAALASAPEATAAALXXFLATAGPTAGAVXXGGALTTPTAAVAPPPATFLRRVRRAEAGARWLGCRLLALVSRGVGRGGG-WPWAALRRDCALQAMA 799          
BLAST of mRNA_H-canaliculatus_F_contig12912.2430.1 vs. uniprot
Match: D8LHI7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHI7_ECTSI)

HSP 1 Score: 460 bits (1184), Expect = 7.880e-143
Identity = 372/703 (52.92%), Postives = 404/703 (57.47%), Query Frame = 0
Query:    1 MALLPKITSMMTTSYTGEVAAXXXXXXXXXXXAHTAASNTVD-GSRHKVEKAAASASVSVMRPRVALSCLRVLCAVAGRAPWAAERVAREPGLLDVVREAFLEPSADGTLPFELSGALSEATSTLQQHXXXXXXXXXQGPTASKTPSSAARGGVRERGGDAESSAPPA--ERSVALLAVRLARILVQSERGVALFVSRTPLLESTKGFLALGQGSPRPLPTLEAVQREALELWRCCLSYGIDVAAADTVVIVARGQGWWPGLGS-----------------------------------VATPPVAIADGAXXXXXXXXXXXXXXXDPPPAAVESAPGIVGVGXXXXXXGGGGRSLSPKLAFYRALHQLACACVLPPGRSDAAKANSAGPGGTKPAAGQSDRKRTGPGKEEAEAAGTVL-------SLGGMKVAPESMADVGDTVDAAVEAALLWLLSAGRSGPEERGAKAGGTAERAQQAAAIHLVASWVERYRSMSRDAGRRASRHLESTVEDATVLFSTLLASRSQLLPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGLDWLSGVFRLGLACEKATPGEAAAALAAAPEVTCAALAGFLASAAVGTAGAXXXXXXXXXL-------PGRFSRRLRRAEAGARWLGCRLTA--CGDAGRSAGVGRWRWPVLRRDCALQVCA 649
            MALLPKI S++  SY  +VAA           A        D GS H   +A A+A+    RPR ALSCLRVLCAVAGRAPWAAERVA EPGLLD VREAFLEP ADGTLP +LS   + AT T             Q P  S      A G  R  G    +  PP   +  +ALLAVRLAR+LVQS RGVAL +S+TPLL STKG+LALGQGS RPLP LEAVQRE LELWRCCLSYG+DVAAADTVV+VARGQGWWPGL                                     V   P A     XXXXXXXXXXXXXXX     A  S+               GG SL P+LAFYRALHQLACACVLPPG S A +  + G                G GK  A AAGT +       S+GG+ V PES ADVGDTVDAAVE ALLWLLS  R G    G  A   AE AQQAAA+HLVA WVERY++MSR  GRR SRHLEST EDA VLFS+LLAS +  LPA              XXXXXXXXXXX                    AAGLDWLSGVFRLGLACE+A PGEAAAALA+APE T                  XXXXXXXXX        P  F RR+RRAEAGARWLGCRL A  C   GR  G   W W  LRRDCALQ  A
Sbjct:  592 MALLPKIASVIK-SYADQVAADGAQA------ASDGGGGLGDKGSFHGAARATAAATAVSFRPRAALSCLRVLCAVAGRAPWAAERVASEPGLLDAVREAFLEPRADGTLPLDLSET-APATVTATAIPKQLSPPPPQEPATSAR----AEGKARTEGPRDANGCPPXXXQEQLALLAVRLARVLVQSGRGVALALSQTPLLGSTKGWLALGQGSRRPLPALEAVQREVLELWRCCLSYGVDVAAADTVVLVARGQGWWPGLSGGVGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVGEEPTAXXXXXXXXXXXXXXXXXXXXXXXVGAQSSSGVAQSTSGGAGGGSRGGDSLPPRLAFYRALHQLACACVLPPGVSAAGRNKNDGA-----------ETAGGDGKAGAGAAGTGVRKEAEGFSVGGVAVVPESWADVGDTVDAAVEGALLWLLSGVRGGGRVGGXXA---AETAQQAAAVHLVACWVERYQAMSRTIGRRGSRHLESTAEDAAVLFSSLLASPALPLPAAVAATTAVTRRGDQXXXXXXXXXXXSGDGFSQRGVSSGEAAA---AAGLDWLSGVFRLGLACERAVPGEAAAALASAPEATAXXXXXXXXXXXXXXXXXXXXXXXXXXPTAAVAPPPATFLRRVRRAEAGARWLGCRLLALGCRGGGREGG---WPWAALRRDCALQAMA 1262          
BLAST of mRNA_H-canaliculatus_F_contig12912.2430.1 vs. uniprot
Match: A0A835YNX8_9STRA (RPAP1_C domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNX8_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 5.780e-13
Identity = 77/215 (35.81%), Postives = 98/215 (45.58%), Query Frame = 0
Query:   42 DGSRHKVEKAAASASVSVMR-PRVALSCLRVLCAVAGRAPWAAERVAREPGLLDVVREAFLEPSADGTLPFELSGALSEATSTLQQHXXXXXXXXXQGPTASKTPSSAARGGVRERGGDAESSAPPAERSVALLAVRLARILVQSERGVA---LFVSRTPLLESTKGFLALG-QGSPRPLPTLEAVQREALELWRCCLSYGIDVAAADTVVIVAR 251
            D S   V  AAA A+      P  A+ CLRVL AVA  +   AER+  EPGLLD VREAF+EP   G  P  LS   S                                GG    GG +  S    ERS A+ A+RLAR +    R  A   L+  R  +L++ +  LALG          L A Q EAL +W  CL YG+ + AA+TV+ +A+
Sbjct:  372 DASAPWVIAAAADAAADCRSAPPGAVECLRVLVAVARSSAANAERIIAEPGLLDAVREAFVEPDTAGAPPVPLSCGSS--------------------------------GG----GGGSTGSGNDVERSPAVWALRLARAVCHGSRLAARHVLYGGRGGILDAAQALLALGGXXXXXXXXVLAAAQCEALAVWHACLRYGLALEAAETVLPLAQ 550          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12912.2430.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JML9_9PHAE5.020e-15355.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHI7_ECTSI7.880e-14352.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YNX8_9STRA5.780e-1335.81RPAP1_C domain-containing protein n=1 Tax=Tribonem... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 39..649
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..38
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 19..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 31..38

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12912contigH-canaliculatus_F_contig12912:141..3377 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12912.2430.1mRNA_H-canaliculatus_F_contig12912.2430.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig12912 132..3377 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig12912.2430.1 ID=prot_H-canaliculatus_F_contig12912.2430.1|Name=mRNA_H-canaliculatus_F_contig12912.2430.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=649bp
MALLPKITSMMTTSYTGEVAAAAAAAAAAAAGAHTAASNTVDGSRHKVEK
AAASASVSVMRPRVALSCLRVLCAVAGRAPWAAERVAREPGLLDVVREAF
LEPSADGTLPFELSGALSEATSTLQQHNPPPPPPPAQGPTASKTPSSAAR
GGVRERGGDAESSAPPAERSVALLAVRLARILVQSERGVALFVSRTPLLE
STKGFLALGQGSPRPLPTLEAVQREALELWRCCLSYGIDVAAADTVVIVA
RGQGWWPGLGSVATPPVAIADGAGAGGAGAGAEDGDGDDPPPAAVESAPG
IVGVGGVGRVGGGGGRSLSPKLAFYRALHQLACACVLPPGRSDAAKANSA
GPGGTKPAAGQSDRKRTGPGKEEAEAAGTVLSLGGMKVAPESMADVGDTV
DAAVEAALLWLLSAGRSGPEERGAKAGGTAERAQQAAAIHLVASWVERYR
SMSRDAGRRASRHLESTVEDATVLFSTLLASRSQLLPAAAAAAAAAVIPS
DDKPGGGQVRRSGESPPAITAAAGTAAAAAATAAAGLDWLSGVFRLGLAC
EKATPGEAAAALAAAPEVTCAALAGFLASAAVGTAGASAGAGAPAALPGR
FSRRLRRAEAGARWLGCRLTACGDAGRSAGVGRWRWPVLRRDCALQVCA
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