mRNA_H-canaliculatus_F_contig129.2420.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig129.2420.1 vs. uniprot
Match: D7FN81_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN81_ECTSI) HSP 1 Score: 266 bits (679), Expect = 6.250e-80 Identity = 129/132 (97.73%), Postives = 131/132 (99.24%), Query Frame = 1
Query: 1 LLDLRPLPTTALQNPKFESLYRYQHFNPIQTQLFHVLYHSDESVLLGAPTGSGKTAVAEIAIMRMLNEHPGAKAVYVAPLKALARERLKDWREKFGKKMGMGVLELTGDHTPDGDALRRATIIVTTPEKWDG 396
LLDLRPLPTTALQNPKFESLYRYQHFNPIQTQLFHVLYHSDESVLLGAPTGSGKTAVAEIAIMRMLN+HPGAKAVYVAPLKALARERLKDWREKFGKKM MGVLELTGDHTPDGDALRRA+IIVTTPEKWDG
Sbjct: 1433 LLDLRPLPTTALQNPKFESLYRYQHFNPIQTQLFHVLYHSDESVLLGAPTGSGKTAVAEIAIMRMLNQHPGAKAVYVAPLKALARERLKDWREKFGKKMDMGVLELTGDHTPDGDALRRASIIVTTPEKWDG 1564
BLAST of mRNA_H-canaliculatus_F_contig129.2420.1 vs. uniprot
Match: A0A2G9TAS7_TELCI (DEAD/DEAH box helicase (Fragment) n=1 Tax=Teladorsagia circumcincta TaxID=45464 RepID=A0A2G9TAS7_TELCI) HSP 1 Score: 181 bits (460), Expect = 1.110e-56 Identity = 83/132 (62.88%), Postives = 104/132 (78.79%), Query Frame = 1
Query: 1 LLDLRPLPTTALQNPKFESLYRYQHFNPIQTQLFHVLYHSDESVLLGAPTGSGKTAVAEIAIMRMLNEHPGAKAVYVAPLKALARERLKDWREKFGKKMGMGVLELTGDHTPDGDALRRATIIVTTPEKWDG 396
LL L PLP T L+N FES+Y + +FNPIQTQ+FH LY++DE+ L+GAPTGSGKT AE+AI R+L +P K VY+APLKAL RER+ DWREKF KKMG V+E++GD+TPD + L A I++TTPEKWDG
Sbjct: 1 LLPLDPLPVTTLRNKAFESIYNFAYFNPIQTQIFHCLYNTDENALIGAPTGSGKTLCAELAIFRLLQNNPSKKCVYIAPLKALVRERVSDWREKFEKKMGYRVVEVSGDYTPDVNTLNAAPIMITTPEKWDG 132
BLAST of mRNA_H-canaliculatus_F_contig129.2420.1 vs. uniprot
Match: A0A222AJC7_SPOLI (Activating signal cointegrator 1 complex subunit 3 (Fragment) n=1 Tax=Spodoptera littoralis TaxID=7109 RepID=A0A222AJC7_SPOLI) HSP 1 Score: 186 bits (473), Expect = 5.130e-56 Identity = 83/132 (62.88%), Postives = 107/132 (81.06%), Query Frame = 1
Query: 1 LLDLRPLPTTALQNPKFESLYRYQHFNPIQTQLFHVLYHSDESVLLGAPTGSGKTAVAEIAIMRMLNEHPGAKAVYVAPLKALARERLKDWREKFGKKMGMGVLELTGDHTPDGDALRRATIIVTTPEKWDG 396
LL+L+PLP TAL NP FE LY + HFNPIQTQ+FH LYH+D +VLLGAPTGSGKT VAE+A+ R+ N++P K VY+APLKAL +ER+KDW+ + +++G V+ELTGD +PD A+R + +IVTTPEKWDG
Sbjct: 93 LLELQPLPVTALNNPNFEMLYNFSHFNPIQTQIFHCLYHTDHNVLLGAPTGSGKTIVAEVAMFRVFNQYPNCKVVYIAPLKALVKERIKDWKVRLQERLGKQVVELTGDVSPDIRAIRNSHVIVTTPEKWDG 224
BLAST of mRNA_H-canaliculatus_F_contig129.2420.1 vs. uniprot
Match: E9H7W7_DAPPU (Uncharacterized protein n=6 Tax=Daphnia TaxID=6668 RepID=E9H7W7_DAPPU) HSP 1 Score: 197 bits (500), Expect = 7.810e-56 Identity = 90/132 (68.18%), Postives = 112/132 (84.85%), Query Frame = 1
Query: 1 LLDLRPLPTTALQNPKFESLYRYQHFNPIQTQLFHVLYHSDESVLLGAPTGSGKTAVAEIAIMRMLNEHPGAKAVYVAPLKALARERLKDWREKFGKKMGMGVLELTGDHTPDGDALRRATIIVTTPEKWDG 396
LLDL+PLP TAL+NP+++SLY + +FNPIQTQLFHVLYH+D +VLLGAPTGSGKT VAEIA+ R+ E+P AK VY+AP+KAL RER+ DWRE+ G+++G V+ELTGD TPD A+ RA +IVTTPEKWDG
Sbjct: 1036 LLDLKPLPVTALKNPEWQSLYSFPYFNPIQTQLFHVLYHTDHNVLLGAPTGSGKTIVAEIAMFRVFREYPKAKVVYIAPMKALVRERMDDWRERLGRRLGKNVVELTGDVTPDVRAISRADVIVTTPEKWDG 1167
BLAST of mRNA_H-canaliculatus_F_contig129.2420.1 vs. uniprot
Match: A0A7S0PBS9_CAFRO (Hypothetical protein (Fragment) n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0PBS9_CAFRO) HSP 1 Score: 196 bits (499), Expect = 1.060e-55 Identity = 92/132 (69.70%), Postives = 108/132 (81.82%), Query Frame = 1
Query: 1 LLDLRPLPTTALQNPKFESLYRYQHFNPIQTQLFHVLYHSDESVLLGAPTGSGKTAVAEIAIMRMLNEHPGAKAVYVAPLKALARERLKDWREKFGKKMGMGVLELTGDHTPDGDALRRATIIVTTPEKWDG 396
LLDL PLP TALQ FES++R+ HFNPIQTQ+FHVLYH+D +VLLGAPTGSGKT AE+A+ R+ NE PG+KAVY+APLKAL ER+KDW KFG+ MG V+ELTGD TPD AL+ A I+VTTPEKWDG
Sbjct: 828 LLDLVPLPKTALQCEAFESIFRFTHFNPIQTQIFHVLYHTDHNVLLGAPTGSGKTVAAELAVFRLFNERPGSKAVYIAPLKALVSERIKDWGRKFGEGMGKRVVELTGDVTPDAKALQEADILVTTPEKWDG 959
BLAST of mRNA_H-canaliculatus_F_contig129.2420.1 vs. uniprot
Match: A0A5A8CBV3_CAFRO (Uncharacterized protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CBV3_CAFRO) HSP 1 Score: 196 bits (499), Expect = 1.070e-55 Identity = 92/132 (69.70%), Postives = 108/132 (81.82%), Query Frame = 1
Query: 1 LLDLRPLPTTALQNPKFESLYRYQHFNPIQTQLFHVLYHSDESVLLGAPTGSGKTAVAEIAIMRMLNEHPGAKAVYVAPLKALARERLKDWREKFGKKMGMGVLELTGDHTPDGDALRRATIIVTTPEKWDG 396
LLDL PLP TALQ FES++R+ HFNPIQTQ+FHVLYH+D +VLLGAPTGSGKT AE+A+ R+ NE PG+KAVY+APLKAL ER+KDW KFG+ MG V+ELTGD TPD AL+ A I+VTTPEKWDG
Sbjct: 1013 LLDLVPLPKTALQCEAFESIFRFTHFNPIQTQIFHVLYHTDHNVLLGAPTGSGKTVAAELAVFRLFNERPGSKAVYIAPLKALVSERIKDWGRKFGEGMGKRVVELTGDVTPDAKALQEADILVTTPEKWDG 1144
BLAST of mRNA_H-canaliculatus_F_contig129.2420.1 vs. uniprot
Match: UPI001EEBA4C6 (activating signal cointegrator 1 complex subunit 3-like isoform X1 n=3 Tax=Daphnia pulicaria TaxID=35523 RepID=UPI001EEBA4C6) HSP 1 Score: 195 bits (495), Expect = 3.690e-55 Identity = 89/132 (67.42%), Postives = 111/132 (84.09%), Query Frame = 1
Query: 1 LLDLRPLPTTALQNPKFESLYRYQHFNPIQTQLFHVLYHSDESVLLGAPTGSGKTAVAEIAIMRMLNEHPGAKAVYVAPLKALARERLKDWREKFGKKMGMGVLELTGDHTPDGDALRRATIIVTTPEKWDG 396
LLDL+PLP AL+NP+++SLY + +FNPIQTQLFHVLYH+D +VLLGAPTGSGKT VAEIA+ R+ E+P AK VY+AP+KAL RER+ DWRE+ G+++G V+ELTGD TPD A+ RA +IVTTPEKWDG
Sbjct: 1282 LLDLKPLPVAALKNPEWQSLYSFPYFNPIQTQLFHVLYHTDHNVLLGAPTGSGKTIVAEIAMFRVFREYPKAKVVYIAPMKALVRERMDDWRERLGRRLGKNVVELTGDVTPDVRAISRADVIVTTPEKWDG 1413
BLAST of mRNA_H-canaliculatus_F_contig129.2420.1 vs. uniprot
Match: A0A0D2U8J2_CAPO3 (RNA helicase n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2U8J2_CAPO3) HSP 1 Score: 194 bits (493), Expect = 6.810e-55 Identity = 89/132 (67.42%), Postives = 108/132 (81.82%), Query Frame = 1
Query: 1 LLDLRPLPTTALQNPKFESLYRYQHFNPIQTQLFHVLYHSDESVLLGAPTGSGKTAVAEIAIMRMLNEHPGAKAVYVAPLKALARERLKDWREKFGKKMGMGVLELTGDHTPDGDALRRATIIVTTPEKWDG 396
LLDL+PLP AL+NP +E+LYR+ HFNPIQTQ+FH LYH+D +VLLGAPTGSGKT VAE+A R+ NE+P K VY+APLKAL RER+ DW E+F +++G V+ELTGD TPD AL RA +IVTTPEKWDG
Sbjct: 1386 LLDLQPLPKAALRNPAYEALYRFSHFNPIQTQVFHTLYHTDHNVLLGAPTGSGKTIVAELAAYRVFNEYPHTKVVYIAPLKALVRERMDDWLERFQRRLGKRVVELTGDFTPDLQALHRADVIVTTPEKWDG 1517
BLAST of mRNA_H-canaliculatus_F_contig129.2420.1 vs. uniprot
Match: A0A4Y2GJ84_ARAVE (Activating signal cointegrator 1 complex subunit 3 n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2GJ84_ARAVE) HSP 1 Score: 194 bits (493), Expect = 6.870e-55 Identity = 89/132 (67.42%), Postives = 111/132 (84.09%), Query Frame = 1
Query: 1 LLDLRPLPTTALQNPKFESLYRYQHFNPIQTQLFHVLYHSDESVLLGAPTGSGKTAVAEIAIMRMLNEHPGAKAVYVAPLKALARERLKDWREKFGKKMGMGVLELTGDHTPDGDALRRATIIVTTPEKWDG 396
LL+L PLP TAL+NP +ESLY++ +FNPIQTQ+FH LYH+D +VLLGAPTGSGKT AEIAI+R+ NE+PG+K +Y+APLKAL RER++DWR +F +++G V ELTGD TPD A+ RA IIVTTPEKWDG
Sbjct: 1306 LLNLVPLPKTALKNPMYESLYKFDYFNPIQTQIFHTLYHTDHNVLLGAPTGSGKTIAAEIAILRVFNEYPGSKVIYIAPLKALVRERIEDWRIRFQQQLGKRVEELTGDVTPDAQAIARADIIVTTPEKWDG 1437
BLAST of mRNA_H-canaliculatus_F_contig129.2420.1 vs. uniprot
Match: UPI0003521534 (RNA helicase n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=UPI0003521534) HSP 1 Score: 194 bits (493), Expect = 6.870e-55 Identity = 89/132 (67.42%), Postives = 108/132 (81.82%), Query Frame = 1
Query: 1 LLDLRPLPTTALQNPKFESLYRYQHFNPIQTQLFHVLYHSDESVLLGAPTGSGKTAVAEIAIMRMLNEHPGAKAVYVAPLKALARERLKDWREKFGKKMGMGVLELTGDHTPDGDALRRATIIVTTPEKWDG 396
LLDL+PLP AL+NP +E+LYR+ HFNPIQTQ+FH LYH+D +VLLGAPTGSGKT VAE+A R+ NE+P K VY+APLKAL RER+ DW E+F +++G V+ELTGD TPD AL RA +IVTTPEKWDG
Sbjct: 1386 LLDLQPLPKAALRNPAYEALYRFSHFNPIQTQVFHTLYHTDHNVLLGAPTGSGKTIVAELAAYRVFNEYPHTKVVYIAPLKALVRERMDDWLERFQRRLGKRVVELTGDFTPDLQALHRADVIVTTPEKWDG 1517 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig129.2420.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig129.2420.1 >prot_H-canaliculatus_F_contig129.2420.1 ID=prot_H-canaliculatus_F_contig129.2420.1|Name=mRNA_H-canaliculatus_F_contig129.2420.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=132bp LLDLRPLPTTALQNPKFESLYRYQHFNPIQTQLFHVLYHSDESVLLGAPTback to top mRNA from alignment at H-canaliculatus_F_contig129:57948..59655- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig129.2420.1 ID=mRNA_H-canaliculatus_F_contig129.2420.1|Name=mRNA_H-canaliculatus_F_contig129.2420.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1708bp|location=Sequence derived from alignment at H-canaliculatus_F_contig129:57948..59655- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig129:57948..59655- >mRNA_H-canaliculatus_F_contig129.2420.1 ID=mRNA_H-canaliculatus_F_contig129.2420.1|Name=mRNA_H-canaliculatus_F_contig129.2420.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=792bp|location=Sequence derived from alignment at H-canaliculatus_F_contig129:57948..59655- (Hapterophycus canaliculatus Oshoro5f female)back to top |