mRNA_H-canaliculatus_F_contig12803.2336.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig12803.2336.1 vs. uniprot
Match: D8LGI0_ECTSI (SFM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGI0_ECTSI) HSP 1 Score: 335 bits (859), Expect = 2.770e-109 Identity = 185/213 (86.85%), Postives = 196/213 (92.02%), Query Frame = 1
Query: 1 RELGQPIRLFSENVADIRERLRRFIAAAEMDDEETEKIKDMVAPKPSFLPRRMQMGGE-AAGAXXXXXXXXXATPAAKKAEVVYTPASDGLLEARAAIATMSFGRAKGRLIGAKRRRGTPEEASALDQQAGETLSTMKNLAINSSQFADDRPLSAIQVSPDGGTVASGSWTCLVKLWDIENLEMRKVLRGHSERVTGVTWHPGAYSSEKTLLA 636
R+LGQP+RLFSENVADIRERLRRFIAA+EM+DEE EKI+ MVAPKPSF+PR+MQMGGE AAGA XXXXX PAAKK EVVYTPASD LLEARAAIATMSFGRAK RL GAKRRRGTPEE SA+D++A ET STMKNLAINSSQFADDRPLSAIQVSPDGGTVASGSWTCLVKLWDIENLEMRKVLRGHSERVTGVTWHP AYSS+KTLLA
Sbjct: 118 RQLGQPVRLFSENVADIRERLRRFIAASEMEDEEAEKIEGMVAPKPSFVPRKMQMGGEPAAGAAXXXXXP----PAAKKVEVVYTPASDALLEARAAIATMSFGRAKSRLAGAKRRRGTPEETSAVDRRAVETFSTMKNLAINSSQFADDRPLSAIQVSPDGGTVASGSWTCLVKLWDIENLEMRKVLRGHSERVTGVTWHPEAYSSDKTLLA 326
BLAST of mRNA_H-canaliculatus_F_contig12803.2336.1 vs. uniprot
Match: A0A835YL38_9STRA (Quinon protein alcohol dehydrogenase-like superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL38_9STRA) HSP 1 Score: 149 bits (376), Expect = 1.850e-38 Identity = 96/219 (43.84%), Postives = 124/219 (56.62%), Query Frame = 1
Query: 1 RELGQPIRLFSENVADIRERLRRFIAAAEMDDEETEKIKDMVAPKPSFLPRRMQMGGEAAGAXXXXXXXXXATPAAKKAEVVYTPASDGLLEARAAIATMSFGRAKGRLIGAKRRRGTPEEASALDQQAGETLSTMKNLAINSSQFADDRPLSAIQVSPDGGTVASGSWTCLVKLWDIENLEMRKVLRGHSERVTGVTWHPGAYSSE-KTLLASGAADK 654
R LGQPIRLFSE +AD+RERLR +A ++D E + ++A + P + G KAEVVYT A+ L+EAR IA+ SF A RL AKRRR ASA D A + +K L IN S D+RPLSA++VSPDG VAS +W+ + KLW++++L V RGH ER+TGV WHP A + LL + AADK
Sbjct: 95 RRLGQPIRLFSETLADVRERLREHLAQLQLDGEGDAAVASLLA---AAEPAKAAAAAVEEG----------------KAEVVYTVAAAPLIEAREVIASYSFAAAPQRLARAKRRRLDSAVASAEDAAAAAACTRLKGLVINVSAVGDERPLSAVRVSPDGSLVASAAWSGVAKLWNMKDLRPCGVFRGHKERLTGVAWHPRALTEAGPALLVTAAADK 294
BLAST of mRNA_H-canaliculatus_F_contig12803.2336.1 vs. uniprot
Match: A0A7S2WFU9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WFU9_9STRA) HSP 1 Score: 138 bits (348), Expect = 8.410e-35 Identity = 94/222 (42.34%), Postives = 123/222 (55.41%), Query Frame = 1
Query: 1 RELGQPIRLFSENVADIRERLRRFIAAAEMDDEETEKIKDMVAPKPSFLPRRMQMGGEAAGAXXXXXXXXXATPAAKKAEVVYTPASDGLLEARAAIATMSFGRAKGRLIGAKRRRGTPEEASALDQQAGETLSTMKNLAINSSQFADDRPLSAIQVSPDGGTVASGSWTCLVKLWDIENLEMRKVLRG---HSERVTGVTWHPGAYSSEKT--LLASGAAD 651
R +GQP+RLF EN+ADIRERLR FIA ++D +E P L M+ A KKA+V Y+ AS L+EAR I S R+ G KRRR + EE + +D+ A ET M+ LAI++SQFAD+RPL A + +P VAS S +KLWD E+LE + +L G H+ER TG+ WHP A+ S LLAS +AD
Sbjct: 83 RSIGQPVRLFGENLADIRERLREFIARRQLDGDEA----------PGMLTEPMEEDKPKAPE--------------KKADV-YSEASADLVEARQRIFDYSSTHTVERMAGVKRRRESAEERARVDESAKETYKDMRALAISASQFADERPLGACRCAPHADVVASASLAPYIKLWDTESLESKGILGGPGAHTERATGLAWHPQAFGSMDAAPLLASSSAD 279
BLAST of mRNA_H-canaliculatus_F_contig12803.2336.1 vs. uniprot
Match: M4B2G3_HYAAE (SFM domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B2G3_HYAAE) HSP 1 Score: 114 bits (284), Expect = 1.100e-25 Identity = 81/229 (35.37%), Postives = 118/229 (51.53%), Query Frame = 1
Query: 1 RELGQPIRLFSENVADIRERLRRFIAAAEMDDEETEKIKDMVAPKPSFLPRRMQMGGEAAGAXXXXXXXXXAT---PAAKKAEVVYTP-ASDGLLEARAAIATMSFGRAKGRLIGAKRRRG--TPEEASALDQQAGETLSTMKNLAINSSQFADDRPLSAIQVSPDGGTVASGSWTCLVKLWDIENLEMRKVLRGHSERVTGVTWHPGAYSSEKT------LLASGAAD 651
R+LG+PI LF E AD RERLR ++ +++ EE ++ + + ++ +AAG AT A ++++ Y P ++ + + RA I + RL ++ R E A +DQ A S + +A +SQ D RP+SA++ S DGG VA+GSW+ LVK+WD N KV RGH +RVTGV WHP SE T L SG+AD
Sbjct: 97 RQLGEPITLFGERPADRRERLREILSRLDVEAEENGYVRQVFGDI-----EKQEIAADAAGDERAAGAGETATGKLSRAHESQLFYVPLTNEKMKKVRATIFAHASSATGARLKRERQERSMSAEERARTVDQYAAGLYSAAQKMANVASQNGDVRPISAVRFSADGGHVATGSWSSLVKVWDATNANEVKVFRGHEDRVTGVAWHPTKAFSEMTDSGDSVCLCSGSAD 320
BLAST of mRNA_H-canaliculatus_F_contig12803.2336.1 vs. uniprot
Match: A0A7S2CJH2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CJH2_9STRA) HSP 1 Score: 102 bits (255), Expect = 3.280e-22 Identity = 62/146 (42.47%), Postives = 87/146 (59.59%), Query Frame = 1
Query: 244 VYTPASDGLLEARAAIATMSFGRAKGRLIGAKRRRGTPEEASALDQQAGETLSTMKNLAINSSQFADDRPLSAIQVSPDGGTVASGSWTCLVKLWDIENLEMRKVL--------RGHSERVTGVTWHPGAYSSEKT--LLASGAAD 651
VY+ A+ LL AR ++ SF + RL G KRRR + + A++ +A + + L I++SQ ADDRPL+A++ SP GG +ASGS VKLWD +L+ + L R +ER TG+ WHP AY + T LLASG+AD
Sbjct: 14 VYSEATPELLTARDCLSAFSFKASAERLRGLKRRRDSEAASDAVNSEAEALYTDTEALFISASQLADDRPLTAVRCSPQGGVLASGSLAHYVKLWDATSLQPKGTLSAAEGSSERAQTERTTGLAWHPHAYGAASTTPLLASGSAD 159
BLAST of mRNA_H-canaliculatus_F_contig12803.2336.1 vs. uniprot
Match: A0A8J4LV17_9CHLO (SFM domain-containing protein n=2 Tax=Volvox TaxID=3066 RepID=A0A8J4LV17_9CHLO) HSP 1 Score: 99.4 bits (246), Expect = 1.230e-20 Identity = 80/224 (35.71%), Postives = 108/224 (48.21%), Query Frame = 1
Query: 1 RELGQPIRLFSENVADIRERLRRFIAAAEMDDEETEKIKDMVAPKPSFLPRRMQMGGEAAGAXXXXXXXXXATPAAKKAEVVYTPASDGLLEARAAIATMSFGRAKGRLIGAKRRRGTPEEAS-ALDQQAGETLSTMKNLAINSSQFADDRPLSAIQVSPDGGTVASGSWTCLVKLWDIENLEMRKV--LRGHSERVTGVTWHP----GAYSSEKTLLASGAAD 651
R+LG+P+ LF E + RERL+R IA D E E LP Q+ E A + E+ YT D L AR A+A S RAKGRL+GAKRRR PE A D QA + ++ + SS+ D RP+S Q SPDG ++A+ W ++ LW + R + + R+TGV WHP G++S LAS A+D
Sbjct: 48 RQLGEPVTLFGEREMERRERLKRIIAQR---DGEVE----------LDLPTTEQLLSE---------------EVAVQKELFYTEGPDELRTARLALARFSLMRAKGRLLGAKRRREDPEALQVAADTQAA-AAAAVRTIVQQSSELGDTRPVSHCQFSPDGSSLAACGWGGVLALWSVPACTKRWTAPVPAEAPRLTGVAWHPAATHGSHSEAAVNLASAASD 242
BLAST of mRNA_H-canaliculatus_F_contig12803.2336.1 vs. uniprot
Match: A0A176WCK7_MARPO (SFM domain-containing protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176WCK7_MARPO) HSP 1 Score: 99.8 bits (247), Expect = 1.300e-20 Identity = 75/220 (34.09%), Postives = 108/220 (49.09%), Query Frame = 1
Query: 1 RELGQPIRLFSENVADIRERLRRFIAAAEMDDEETEKIKDMVAPKPSFLPRRMQMGGEAAGAXXXXXXXXXATPAAKKAEVVYTPASDGLLEARAAIATMSFGRAKGRLIGAKRRRGTPEEASALDQQAGETLSTMKNLAINSSQFADDRPLSAIQVSPDGGTVASGSWTCLVKLWDIENLEMRKVLRGHSERVTGVTWHPGA---YSSEKTLLASGAAD 651
R L QPI LF E + R+RLR +A + D E + ++ A G AAG P E T S+ L +AR I S RA R+ AKR+R P+E + + E L M ++ S+ D+RPLS +SPDG +A+ SW+ KLW++ ++ VL+GH+ERVTGV +HP + SS +A+G+AD
Sbjct: 154 RSLQQPITLFGEREMERRDRLRAVMARLDADGELEKLLQAQEAAGD---------GAAAAGVEDAGTSEEVLEPEPSLLEPFITEGSNELRQARMEILKFSMPRAAMRIQRAKRKREDPDEDE--NAETDEVLQGMAQTSMECSEIGDERPLSGCALSPDGFLLATSSWSGHTKLWEVPAVKKTVVLKGHTERVTGVAFHPQSCKTLSSSAGNIATGSAD 362
BLAST of mRNA_H-canaliculatus_F_contig12803.2336.1 vs. uniprot
Match: A0A7S0IV16_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0IV16_9EUKA) HSP 1 Score: 99.4 bits (246), Expect = 1.570e-20 Identity = 75/217 (34.56%), Postives = 104/217 (47.93%), Query Frame = 1
Query: 1 RELGQPIRLFSENVADIRERLRRFIAAAEMDDEE------TEKIKDMVAPKPSFLPRRMQMGGEAAGAXXXXXXXXXATPAAKKAEVVYTPASDGLLEARAAIATMSFGRAKGRLIG----AKRRRGTPEEASALDQQAGETLSTMKNLAINSSQFADDRPLSAIQVSPDGGTVASGSWTCLVKLWDIENLEMRKVLRGHSERVTGVTWHPGAYSSE 621
RE G+PI LF+E + RERLR +AA D+ E +KD A FL + + E G +K E+ YT S L AR IAT S A RL A+R+ G P + + L ++N N F DDRP+S + SP A+GSW+ ++KLW I + LRGH+ER++G+ WHPGA S++
Sbjct: 97 REFGEPICLFAEGAPERRERLREVMAAKLTHDDAKGELRGAEVLKDAEASIKPFLRHQKKERTEVGG---------------QKDELFYTEGSAALKAARGWIATYSLEHAVKRLADERADAQRKCGDPASEVSAYKTLEHHLVAVENQLSN---FGDDRPVSFVAFSPGSAMCATGSWSAVIKLWSIPSCSGITTLRGHTERISGLAWHPGANSTQ 295
BLAST of mRNA_H-canaliculatus_F_contig12803.2336.1 vs. uniprot
Match: W4FW08_9STRA (SFM domain-containing protein n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FW08_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 3.770e-20 Identity = 70/222 (31.53%), Postives = 104/222 (46.85%), Query Frame = 1
Query: 1 RELGQPIRLFSENVADIRERLRRFIAAAEMDDEETEKIKDMVAPKPSFLPRRMQMGGEAAGAXXXXXXXXXATPAAKKAEVVYTPA-SDGLLEARAAIATMSFGRAKGRLIGAKRRRGTPEEASALDQQAGETLSTMKNLAINSSQFADDRPLSAIQVSPDGGTVASGSWTCLVKLWDIENLEMRKVLRGHSERVTGVTWHPGAYSSEKT----LLASGAAD 651
R LG PI LF E D R RLR +++ +D LP+ + + + + + ++ Y P S+ L AR A+ S R RL R LD A + T +++A+N+SQ AD RPLSA++ SPD +A+GSW+ VKLWD + + GH++R+TG+ WHP A S+ T L+ S +AD
Sbjct: 89 RSLGHPITLFGERPEDRRARLRTVLSSLAVD---------------GVLPQAVSRAQDISSSVGYEKEKKVPL----EDQLFYVPVKSNDLKHARQALFNYSMVRTNARLQ--HERAQQDSSVFELDAHAADLYRTSQHIAVNASQLADVRPLSAVRFSPDASMLATGSWSSSVKLWDSKTCALMHTFHGHTDRITGIAWHPTATSAASTSSSLLVGSASAD 289
BLAST of mRNA_H-canaliculatus_F_contig12803.2336.1 vs. uniprot
Match: A0A2S7PBE1_9HELO (SFM domain-containing protein n=3 Tax=unclassified Rutstroemia TaxID=2684950 RepID=A0A2S7PBE1_9HELO) HSP 1 Score: 97.4 bits (241), Expect = 7.200e-20 Identity = 79/224 (35.27%), Postives = 115/224 (51.34%), Query Frame = 1
Query: 1 RELGQPIRLFSENVADIRERLRRFIAA-AEMDDEETEKIKDMVAPKPSFLPRRMQMGGEAAGAXXXXXXXXXATPAAKKAEVVYTPASDGLLEARAAIATMSFGRAKGRLIGAKRRRGTPEEASALDQQAGETLSTMKNLAINSSQFADDRPLSAIQVSPDGGTVASGSWTCLVKLWDIENLEMRKVLRGHSERVTGVTWHPGA------YSSEKTLLASGAAD 651
RELG+PI LF E+ AD R+RLR + AEM D ++D V ++MG +A G A + E YT S LLEAR IA S RAK R+ K G P +Q +++ + SQ A +RP+S +++SP+G VA+G+W +K+ I +LE+++ LRGH++RV G++W PGA + LASG A+
Sbjct: 75 RELGEPITLFGEDAADRRDRLRSLLTIEAEMRD-----LEDGVGD--------IEMG-DAGG---------EAKEGDEAEEEFYTRGSGELLEARVDIAKFSLPRAKRRVEIQKVESGIPLRTHIKFRQG--IKERLRDFELQGSQTAGERPVSIVRMSPNGEMVAAGNWGGGIKMLGIPDLEVKRTLRGHTDRVGGISWRPGATIEGSGVEGSEVNLASGGAE 273 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12803.2336.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig12803.2336.1 >prot_H-canaliculatus_F_contig12803.2336.1 ID=prot_H-canaliculatus_F_contig12803.2336.1|Name=mRNA_H-canaliculatus_F_contig12803.2336.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=219bp RELGQPIRLFSENVADIRERLRRFIAAAEMDDEETEKIKDMVAPKPSFLPback to top mRNA from alignment at H-canaliculatus_F_contig12803:170..3005+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig12803.2336.1 ID=mRNA_H-canaliculatus_F_contig12803.2336.1|Name=mRNA_H-canaliculatus_F_contig12803.2336.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2836bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12803:170..3005+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig12803:170..3005+ >mRNA_H-canaliculatus_F_contig12803.2336.1 ID=mRNA_H-canaliculatus_F_contig12803.2336.1|Name=mRNA_H-canaliculatus_F_contig12803.2336.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1314bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12803:170..3005+ (Hapterophycus canaliculatus Oshoro5f female)back to top |