prot_H-canaliculatus_F_contig12803.2336.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig12803.2336.1
Unique Nameprot_H-canaliculatus_F_contig12803.2336.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length219
Homology
BLAST of mRNA_H-canaliculatus_F_contig12803.2336.1 vs. uniprot
Match: D8LGI0_ECTSI (SFM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGI0_ECTSI)

HSP 1 Score: 335 bits (859), Expect = 2.770e-109
Identity = 185/213 (86.85%), Postives = 196/213 (92.02%), Query Frame = 0
Query:    1 RELGQPIRLFSENVADIRERLRRFIAAAEMDDEETEKIKDMVAPKPSFLPRRMQMGGE-AAGAXXXXXXXXXATPAAKKAEVVYTPASDGLLEARAAIATMSFGRAKGRLIGAKRRRGTPEEASALDQQAGETLSTMKNLAINSSQFADDRPLSAIQVSPDGGTVASGSWTCLVKLWDIENLEMRKVLRGHSERVTGVTWHPGAYSSEKTLLA 212
            R+LGQP+RLFSENVADIRERLRRFIAA+EM+DEE EKI+ MVAPKPSF+PR+MQMGGE AAGA XXXXX     PAAKK EVVYTPASD LLEARAAIATMSFGRAK RL GAKRRRGTPEE SA+D++A ET STMKNLAINSSQFADDRPLSAIQVSPDGGTVASGSWTCLVKLWDIENLEMRKVLRGHSERVTGVTWHP AYSS+KTLLA
Sbjct:  118 RQLGQPVRLFSENVADIRERLRRFIAASEMEDEEAEKIEGMVAPKPSFVPRKMQMGGEPAAGAAXXXXXP----PAAKKVEVVYTPASDALLEARAAIATMSFGRAKSRLAGAKRRRGTPEETSAVDRRAVETFSTMKNLAINSSQFADDRPLSAIQVSPDGGTVASGSWTCLVKLWDIENLEMRKVLRGHSERVTGVTWHPEAYSSDKTLLA 326          
BLAST of mRNA_H-canaliculatus_F_contig12803.2336.1 vs. uniprot
Match: A0A835YL38_9STRA (Quinon protein alcohol dehydrogenase-like superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL38_9STRA)

HSP 1 Score: 149 bits (376), Expect = 1.850e-38
Identity = 96/219 (43.84%), Postives = 124/219 (56.62%), Query Frame = 0
Query:    1 RELGQPIRLFSENVADIRERLRRFIAAAEMDDEETEKIKDMVAPKPSFLPRRMQMGGEAAGAXXXXXXXXXATPAAKKAEVVYTPASDGLLEARAAIATMSFGRAKGRLIGAKRRRGTPEEASALDQQAGETLSTMKNLAINSSQFADDRPLSAIQVSPDGGTVASGSWTCLVKLWDIENLEMRKVLRGHSERVTGVTWHPGAYSSE-KTLLASGAADK 218
            R LGQPIRLFSE +AD+RERLR  +A  ++D E    +  ++A   +  P +        G                KAEVVYT A+  L+EAR  IA+ SF  A  RL  AKRRR     ASA D  A    + +K L IN S   D+RPLSA++VSPDG  VAS +W+ + KLW++++L    V RGH ER+TGV WHP A +     LL + AADK
Sbjct:   95 RRLGQPIRLFSETLADVRERLREHLAQLQLDGEGDAAVASLLA---AAEPAKAAAAAVEEG----------------KAEVVYTVAAAPLIEAREVIASYSFAAAPQRLARAKRRRLDSAVASAEDAAAAAACTRLKGLVINVSAVGDERPLSAVRVSPDGSLVASAAWSGVAKLWNMKDLRPCGVFRGHKERLTGVAWHPRALTEAGPALLVTAAADK 294          
BLAST of mRNA_H-canaliculatus_F_contig12803.2336.1 vs. uniprot
Match: A0A7S2WFU9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WFU9_9STRA)

HSP 1 Score: 138 bits (348), Expect = 8.410e-35
Identity = 94/222 (42.34%), Postives = 123/222 (55.41%), Query Frame = 0
Query:    1 RELGQPIRLFSENVADIRERLRRFIAAAEMDDEETEKIKDMVAPKPSFLPRRMQMGGEAAGAXXXXXXXXXATPAAKKAEVVYTPASDGLLEARAAIATMSFGRAKGRLIGAKRRRGTPEEASALDQQAGETLSTMKNLAINSSQFADDRPLSAIQVSPDGGTVASGSWTCLVKLWDIENLEMRKVLRG---HSERVTGVTWHPGAYSSEKT--LLASGAAD 217
            R +GQP+RLF EN+ADIRERLR FIA  ++D +E           P  L   M+     A                KKA+V Y+ AS  L+EAR  I   S      R+ G KRRR + EE + +D+ A ET   M+ LAI++SQFAD+RPL A + +P    VAS S    +KLWD E+LE + +L G   H+ER TG+ WHP A+ S     LLAS +AD
Sbjct:   83 RSIGQPVRLFGENLADIRERLREFIARRQLDGDEA----------PGMLTEPMEEDKPKAPE--------------KKADV-YSEASADLVEARQRIFDYSSTHTVERMAGVKRRRESAEERARVDESAKETYKDMRALAISASQFADERPLGACRCAPHADVVASASLAPYIKLWDTESLESKGILGGPGAHTERATGLAWHPQAFGSMDAAPLLASSSAD 279          
BLAST of mRNA_H-canaliculatus_F_contig12803.2336.1 vs. uniprot
Match: M4B2G3_HYAAE (SFM domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B2G3_HYAAE)

HSP 1 Score: 114 bits (284), Expect = 1.100e-25
Identity = 81/229 (35.37%), Postives = 118/229 (51.53%), Query Frame = 0
Query:    1 RELGQPIRLFSENVADIRERLRRFIAAAEMDDEETEKIKDMVAPKPSFLPRRMQMGGEAAGAXXXXXXXXXAT---PAAKKAEVVYTP-ASDGLLEARAAIATMSFGRAKGRLIGAKRRRG--TPEEASALDQQAGETLSTMKNLAINSSQFADDRPLSAIQVSPDGGTVASGSWTCLVKLWDIENLEMRKVLRGHSERVTGVTWHPGAYSSEKT------LLASGAAD 217
            R+LG+PI LF E  AD RERLR  ++  +++ EE   ++ +          + ++  +AAG          AT     A ++++ Y P  ++ + + RA I   +      RL   ++ R     E A  +DQ A    S  + +A  +SQ  D RP+SA++ S DGG VA+GSW+ LVK+WD  N    KV RGH +RVTGV WHP    SE T       L SG+AD
Sbjct:   97 RQLGEPITLFGERPADRRERLREILSRLDVEAEENGYVRQVFGDI-----EKQEIAADAAGDERAAGAGETATGKLSRAHESQLFYVPLTNEKMKKVRATIFAHASSATGARLKRERQERSMSAEERARTVDQYAAGLYSAAQKMANVASQNGDVRPISAVRFSADGGHVATGSWSSLVKVWDATNANEVKVFRGHEDRVTGVAWHPTKAFSEMTDSGDSVCLCSGSAD 320          
BLAST of mRNA_H-canaliculatus_F_contig12803.2336.1 vs. uniprot
Match: A0A7S2CJH2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CJH2_9STRA)

HSP 1 Score: 102 bits (255), Expect = 3.280e-22
Identity = 62/146 (42.47%), Postives = 87/146 (59.59%), Query Frame = 0
Query:   82 VYTPASDGLLEARAAIATMSFGRAKGRLIGAKRRRGTPEEASALDQQAGETLSTMKNLAINSSQFADDRPLSAIQVSPDGGTVASGSWTCLVKLWDIENLEMRKVL--------RGHSERVTGVTWHPGAYSSEKT--LLASGAAD 217
            VY+ A+  LL AR  ++  SF  +  RL G KRRR +   + A++ +A    +  + L I++SQ ADDRPL+A++ SP GG +ASGS    VKLWD  +L+ +  L        R  +ER TG+ WHP AY +  T  LLASG+AD
Sbjct:   14 VYSEATPELLTARDCLSAFSFKASAERLRGLKRRRDSEAASDAVNSEAEALYTDTEALFISASQLADDRPLTAVRCSPQGGVLASGSLAHYVKLWDATSLQPKGTLSAAEGSSERAQTERTTGLAWHPHAYGAASTTPLLASGSAD 159          
BLAST of mRNA_H-canaliculatus_F_contig12803.2336.1 vs. uniprot
Match: A0A8J4LV17_9CHLO (SFM domain-containing protein n=2 Tax=Volvox TaxID=3066 RepID=A0A8J4LV17_9CHLO)

HSP 1 Score: 99.4 bits (246), Expect = 1.230e-20
Identity = 80/224 (35.71%), Postives = 108/224 (48.21%), Query Frame = 0
Query:    1 RELGQPIRLFSENVADIRERLRRFIAAAEMDDEETEKIKDMVAPKPSFLPRRMQMGGEAAGAXXXXXXXXXATPAAKKAEVVYTPASDGLLEARAAIATMSFGRAKGRLIGAKRRRGTPEEAS-ALDQQAGETLSTMKNLAINSSQFADDRPLSAIQVSPDGGTVASGSWTCLVKLWDIENLEMRKV--LRGHSERVTGVTWHP----GAYSSEKTLLASGAAD 217
            R+LG+P+ LF E   + RERL+R IA     D E E            LP   Q+  E                 A + E+ YT   D L  AR A+A  S  RAKGRL+GAKRRR  PE    A D QA    + ++ +   SS+  D RP+S  Q SPDG ++A+  W  ++ LW +     R    +   + R+TGV WHP    G++S     LAS A+D
Sbjct:   48 RQLGEPVTLFGEREMERRERLKRIIAQR---DGEVE----------LDLPTTEQLLSE---------------EVAVQKELFYTEGPDELRTARLALARFSLMRAKGRLLGAKRRREDPEALQVAADTQAA-AAAAVRTIVQQSSELGDTRPVSHCQFSPDGSSLAACGWGGVLALWSVPACTKRWTAPVPAEAPRLTGVAWHPAATHGSHSEAAVNLASAASD 242          
BLAST of mRNA_H-canaliculatus_F_contig12803.2336.1 vs. uniprot
Match: A0A176WCK7_MARPO (SFM domain-containing protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176WCK7_MARPO)

HSP 1 Score: 99.8 bits (247), Expect = 1.300e-20
Identity = 75/220 (34.09%), Postives = 108/220 (49.09%), Query Frame = 0
Query:    1 RELGQPIRLFSENVADIRERLRRFIAAAEMDDEETEKIKDMVAPKPSFLPRRMQMGGEAAGAXXXXXXXXXATPAAKKAEVVYTPASDGLLEARAAIATMSFGRAKGRLIGAKRRRGTPEEASALDQQAGETLSTMKNLAINSSQFADDRPLSAIQVSPDGGTVASGSWTCLVKLWDIENLEMRKVLRGHSERVTGVTWHPGA---YSSEKTLLASGAAD 217
            R L QPI LF E   + R+RLR  +A  + D E  + ++   A            G  AAG            P     E   T  S+ L +AR  I   S  RA  R+  AKR+R  P+E    + +  E L  M   ++  S+  D+RPLS   +SPDG  +A+ SW+   KLW++  ++   VL+GH+ERVTGV +HP +    SS    +A+G+AD
Sbjct:  154 RSLQQPITLFGEREMERRDRLRAVMARLDADGELEKLLQAQEAAGD---------GAAAAGVEDAGTSEEVLEPEPSLLEPFITEGSNELRQARMEILKFSMPRAAMRIQRAKRKREDPDEDE--NAETDEVLQGMAQTSMECSEIGDERPLSGCALSPDGFLLATSSWSGHTKLWEVPAVKKTVVLKGHTERVTGVAFHPQSCKTLSSSAGNIATGSAD 362          
BLAST of mRNA_H-canaliculatus_F_contig12803.2336.1 vs. uniprot
Match: A0A7S0IV16_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0IV16_9EUKA)

HSP 1 Score: 99.4 bits (246), Expect = 1.570e-20
Identity = 75/217 (34.56%), Postives = 104/217 (47.93%), Query Frame = 0
Query:    1 RELGQPIRLFSENVADIRERLRRFIAAAEMDDEE------TEKIKDMVAPKPSFLPRRMQMGGEAAGAXXXXXXXXXATPAAKKAEVVYTPASDGLLEARAAIATMSFGRAKGRLIG----AKRRRGTPEEASALDQQAGETLSTMKNLAINSSQFADDRPLSAIQVSPDGGTVASGSWTCLVKLWDIENLEMRKVLRGHSERVTGVTWHPGAYSSE 207
            RE G+PI LF+E   + RERLR  +AA    D+        E +KD  A    FL  + +   E  G               +K E+ YT  S  L  AR  IAT S   A  RL      A+R+ G P    +  +     L  ++N   N   F DDRP+S +  SP     A+GSW+ ++KLW I +      LRGH+ER++G+ WHPGA S++
Sbjct:   97 REFGEPICLFAEGAPERRERLREVMAAKLTHDDAKGELRGAEVLKDAEASIKPFLRHQKKERTEVGG---------------QKDELFYTEGSAALKAARGWIATYSLEHAVKRLADERADAQRKCGDPASEVSAYKTLEHHLVAVENQLSN---FGDDRPVSFVAFSPGSAMCATGSWSAVIKLWSIPSCSGITTLRGHTERISGLAWHPGANSTQ 295          
BLAST of mRNA_H-canaliculatus_F_contig12803.2336.1 vs. uniprot
Match: W4FW08_9STRA (SFM domain-containing protein n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FW08_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 3.770e-20
Identity = 70/222 (31.53%), Postives = 104/222 (46.85%), Query Frame = 0
Query:    1 RELGQPIRLFSENVADIRERLRRFIAAAEMDDEETEKIKDMVAPKPSFLPRRMQMGGEAAGAXXXXXXXXXATPAAKKAEVVYTPA-SDGLLEARAAIATMSFGRAKGRLIGAKRRRGTPEEASALDQQAGETLSTMKNLAINSSQFADDRPLSAIQVSPDGGTVASGSWTCLVKLWDIENLEMRKVLRGHSERVTGVTWHPGAYSSEKT----LLASGAAD 217
            R LG PI LF E   D R RLR  +++  +D                 LP+ +    + + +               + ++ Y P  S+ L  AR A+   S  R   RL     R         LD  A +   T +++A+N+SQ AD RPLSA++ SPD   +A+GSW+  VKLWD +   +     GH++R+TG+ WHP A S+  T    L+ S +AD
Sbjct:   89 RSLGHPITLFGERPEDRRARLRTVLSSLAVD---------------GVLPQAVSRAQDISSSVGYEKEKKVPL----EDQLFYVPVKSNDLKHARQALFNYSMVRTNARLQ--HERAQQDSSVFELDAHAADLYRTSQHIAVNASQLADVRPLSAVRFSPDASMLATGSWSSSVKLWDSKTCALMHTFHGHTDRITGIAWHPTATSAASTSSSLLVGSASAD 289          
BLAST of mRNA_H-canaliculatus_F_contig12803.2336.1 vs. uniprot
Match: A0A2S7PBE1_9HELO (SFM domain-containing protein n=3 Tax=unclassified Rutstroemia TaxID=2684950 RepID=A0A2S7PBE1_9HELO)

HSP 1 Score: 97.4 bits (241), Expect = 7.200e-20
Identity = 79/224 (35.27%), Postives = 115/224 (51.34%), Query Frame = 0
Query:    1 RELGQPIRLFSENVADIRERLRRFIAA-AEMDDEETEKIKDMVAPKPSFLPRRMQMGGEAAGAXXXXXXXXXATPAAKKAEVVYTPASDGLLEARAAIATMSFGRAKGRLIGAKRRRGTPEEASALDQQAGETLSTMKNLAINSSQFADDRPLSAIQVSPDGGTVASGSWTCLVKLWDIENLEMRKVLRGHSERVTGVTWHPGA------YSSEKTLLASGAAD 217
            RELG+PI LF E+ AD R+RLR  +   AEM D     ++D V          ++MG +A G          A    +  E  YT  S  LLEAR  IA  S  RAK R+   K   G P       +Q       +++  +  SQ A +RP+S +++SP+G  VA+G+W   +K+  I +LE+++ LRGH++RV G++W PGA          +  LASG A+
Sbjct:   75 RELGEPITLFGEDAADRRDRLRSLLTIEAEMRD-----LEDGVGD--------IEMG-DAGG---------EAKEGDEAEEEFYTRGSGELLEARVDIAKFSLPRAKRRVEIQKVESGIPLRTHIKFRQG--IKERLRDFELQGSQTAGERPVSIVRMSPNGEMVAAGNWGGGIKMLGIPDLEVKRTLRGHTDRVGGISWRPGATIEGSGVEGSEVNLASGGAE 273          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12803.2336.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGI0_ECTSI2.770e-10986.85SFM domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835YL38_9STRA1.850e-3843.84Quinon protein alcohol dehydrogenase-like superfam... [more]
A0A7S2WFU9_9STRA8.410e-3542.34Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
M4B2G3_HYAAE1.100e-2535.37SFM domain-containing protein n=1 Tax=Hyaloperonos... [more]
A0A7S2CJH2_9STRA3.280e-2242.47Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A8J4LV17_9CHLO1.230e-2035.71SFM domain-containing protein n=2 Tax=Volvox TaxID... [more]
A0A176WCK7_MARPO1.300e-2034.09SFM domain-containing protein n=2 Tax=Marchantia p... [more]
A0A7S0IV16_9EUKA1.570e-2034.56Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
W4FW08_9STRA3.770e-2031.53SFM domain-containing protein n=7 Tax=Aphanomyces ... [more]
A0A2S7PBE1_9HELO7.200e-2035.27SFM domain-containing protein n=3 Tax=unclassified... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 180..218
e-value: 140.0
score: 3.5
coord: 138..177
e-value: 0.028
score: 23.6
IPR001680WD40 repeatPFAMPF00400WD40coord: 185..218
e-value: 0.27
score: 12.2
coord: 152..177
e-value: 0.031
score: 15.1
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 145..186
score: 9.005
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 92..218
e-value: 3.9E-17
score: 64.2
IPR014906Pre-mRNA processing factor 4 (PRP4)-likePFAMPF08799PRP4coord: 1..23
e-value: 2.6E-8
score: 33.2
NoneNo IPR availablePANTHERPTHR19846:SF0U4/U6 SMALL NUCLEAR RIBONUCLEOPROTEIN PRP4coord: 1..218
NoneNo IPR availablePANTHERPTHR19846WD40 REPEAT PROTEINcoord: 1..218
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 145..218
score: 14.213
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 151..217
IPR036285PRP4-like superfamilySUPERFAMILY158230PRP4-likecoord: 1..30

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12803contigH-canaliculatus_F_contig12803:170..3005 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12803.2336.1mRNA_H-canaliculatus_F_contig12803.2336.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig12803 170..3005 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig12803.2336.1 ID=prot_H-canaliculatus_F_contig12803.2336.1|Name=mRNA_H-canaliculatus_F_contig12803.2336.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=219bp
RELGQPIRLFSENVADIRERLRRFIAAAEMDDEETEKIKDMVAPKPSFLP
RRMQMGGEAAGAGAGAGGAAGATPAAKKAEVVYTPASDGLLEARAAIATM
SFGRAKGRLIGAKRRRGTPEEASALDQQAGETLSTMKNLAINSSQFADDR
PLSAIQVSPDGGTVASGSWTCLVKLWDIENLEMRKVLRGHSERVTGVTWH
PGAYSSEKTLLASGAADK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036285PRP4-like_sf
IPR036322WD40_repeat_dom_sf
IPR017986WD40_repeat_dom
IPR014906PRP4-like
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR001680WD40_repeat