mRNA_H-canaliculatus_F_contig12757.2297.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
|
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig12757.2297.1 vs. uniprot
Match: A0A6H5JK68_9PHAE (Cysteine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JK68_9PHAE) HSP 1 Score: 319 bits (818), Expect = 6.240e-103 Identity = 156/177 (88.14%), Postives = 168/177 (94.92%), Query Frame = 1
Query: 1 SQAEAKYDCCQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALEENTSRQIRLLFLLHKYNTPMDYGDDAMSGALAAEKIFSEFFHNVKAALRRTTARDPARMKEPELTLLSRLADAKVEVRKSLCDDFDTPGAVGALQEVVKAVNKYLETKEKAAETIVADCVRGAAEYVTKIFKV 531
+QAEAKYDCCQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQAL+E++SRQIRLLFLLHKYNTPMDYGDDAMSGALAAE+ FSEFFHNVKAALRRTTARDPAR KEPELTL+S L+DAK EV+K LCDDFDTPGA+GALQE+VK VNKY+E KE+A E IVADCVRGAAEYVTKIFKV
Sbjct: 292 AQAEAKYDCCQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALQEHSSRQIRLLFLLHKYNTPMDYGDDAMSGALAAERTFSEFFHNVKAALRRTTARDPARTKEPELTLMSSLSDAKKEVKKCLCDDFDTPGAMGALQELVKKVNKYIEAKERAGEPIVADCVRGAAEYVTKIFKV 468
BLAST of mRNA_H-canaliculatus_F_contig12757.2297.1 vs. uniprot
Match: A0A835Z463_9STRA (Cysteine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z463_9STRA) HSP 1 Score: 216 bits (549), Expect = 2.070e-63 Identity = 110/178 (61.80%), Postives = 133/178 (74.72%), Query Frame = 1
Query: 1 SQAEAKYDCCQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALEENTSRQIRLLFLLHKYNTPMDYGDDAMSGALAAEKIFSEFFHNVKAALRRTTARDPARMKEPELTLLSRLADAKVEVRKSLCDDFDTPGAVGAL-QEVVKAVNKYLETKEKAAETIVADCVRGAAEYVTKIFKV 531
+QAEA Y+C QWVNYFLHTGHLHIKGFKMSKSLKNFITIKQAL+ +T+RQIR+ FLLHKYN PMDYGD+ M+GALA E+ F EFFH VK+ +R TA D R+ E E+ L +L + K VR +LCDDFDTP A+ L ++V+ VNKY++ K A VR A EYVT+IFKV
Sbjct: 285 AQAEAHYNCAQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALQTHTARQIRMCFLLHKYNDPMDYGDNTMAGALAIERTFVEFFHAVKSVVRAATAVDELRLGEGEIALYRKLEECKSGVRAALCDDFDTPTAIKLLASDLVRTVNKYIQEKTDAGLKSHYIVVRTAGEYVTRIFKV 462
BLAST of mRNA_H-canaliculatus_F_contig12757.2297.1 vs. uniprot
Match: A0A7S3XKM0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XKM0_HETAK) HSP 1 Score: 201 bits (511), Expect = 1.810e-61 Identity = 103/176 (58.52%), Postives = 127/176 (72.16%), Query Frame = 1
Query: 1 SQAEAKYDCCQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALEENTSRQIRLLFLLHKYNTPMDYGDDAMSGALAAEKIFSEFFHNVKAALRRTTARDPARMKEPELTLLSRLADAKVEVRKSLCDDFDTPGAVGALQEVVKAVNKYLETKEKAAETIVADCVRGAAEYVTKIFK 528
+Q+EA C QWVNYF+HTGHLHIKGFKMSKSLKNFITI+QALE +T RQIRL+FL+ KYN PMDYGD M+GAL+ E+ F+E+FHNVKA LRR P + E+ L L++AK V +LCDDFD P A+ LQ++V+A N YLE A + VR AA+YVTKIF+
Sbjct: 42 AQSEAHAGCRQWVNYFVHTGHLHIKGFKMSKSLKNFITIRQALETHTPRQIRLVFLMSKYNAPMDYGDSTMAGALSIERSFAEYFHNVKAVLRRDGVAGPQKWGAREVALGRALSEAKAGVHAALCDDFDCPSALKELQKLVRASNVYLEGNAAPATLL----VRAAAQYVTKIFR 213
BLAST of mRNA_H-canaliculatus_F_contig12757.2297.1 vs. uniprot
Match: A0A6U0T1A9_9STRA (Cysteine--tRNA ligase n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A6U0T1A9_9STRA) HSP 1 Score: 196 bits (498), Expect = 3.990e-56 Identity = 102/177 (57.63%), Postives = 123/177 (69.49%), Query Frame = 1
Query: 1 SQAEAKYDCCQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALEENTSRQIRLLFLLHKYNTPMDYGDDAMSGALAAEKIFSEFFHNVKAALRRTTARDPARMKEPELTLLSRLADAKVEVRKSLCDDFDTPGAVGALQEVVKAVNKYLETKEKAAETIVADCVRGAAEYVTKIFKV 531
+QAEA C QWVNYF+H GHLHIKGFKMSKSLKNFITI+ ALE NT+RQIRL FLLHKYN PMDYGD+ MS +L EK+F EFFHNVKA LR + R E L + L+D K V +L DDFDTP ++ AL ++VKA N YL++ T V +R AA Y+T IF++
Sbjct: 291 AQAEAHSGCNQWVNYFVHAGHLHIKGFKMSKSLKNFITIRDALENNTARQIRLCFLLHKYNAPMDYGDNTMSHSLVTEKLFVEFFHNVKAVLREGNIINIQRWDESARQLQNTLSDIKSRVDAALRDDFDTPASINALSDLVKATNLYLDSCVARQITPVNLLLRNAAVYITHIFRI 467
BLAST of mRNA_H-canaliculatus_F_contig12757.2297.1 vs. uniprot
Match: A0A7S1Y9A2_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y9A2_9STRA) HSP 1 Score: 193 bits (490), Expect = 4.510e-56 Identity = 99/177 (55.93%), Postives = 123/177 (69.49%), Query Frame = 1
Query: 1 SQAEAKYDCCQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALEENTSRQIRLLFLLHKYNTPMDYGDDAMSGALAAEKIFSEFFHNVKAALRRTTARDPARMKEPELTLLSRLADAKVEVRKSLCDDFDTPGAVGALQEVVKAVNKYLETKEKAAETIVADCVRGAAEYVTKIFKV 531
+QAEA C QWVNYF+H GHLHIKGFKMSKSLKNFITI+QALE+N++RQIRL FL+HKYN+PMDYGD+ MS A+ AEK+F EFF N KAALR T +D + L L + V +L DDFDTP + AL ++VK+ N Y++ ETI + + A YVT+IFKV
Sbjct: 145 AQAEAHSGCTQWVNYFVHAGHLHIKGFKMSKSLKNFITIRQALEQNSARQIRLCFLMHKYNSPMDYGDNTMSHAMTAEKLFKEFFLNTKAALRATAMKDSKKWTPATKDLQKTLHQTQAAVDVALKDDFDTPAVMSALADLVKSTNSYMQDN---VETINSLLLNNVAAYVTRIFKV 318
BLAST of mRNA_H-canaliculatus_F_contig12757.2297.1 vs. uniprot
Match: A0A7S1FUV2_9STRA (Cysteine--tRNA ligase n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FUV2_9STRA) HSP 1 Score: 191 bits (485), Expect = 2.930e-54 Identity = 105/177 (59.32%), Postives = 130/177 (73.45%), Query Frame = 1
Query: 1 SQAEAKYDCCQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALEENTSRQIRLLFLLHKYNTPMDYGDDAMSGALAAEKIFSEFFHNVKAALRRTTARDPARMKEPELTLLSRLADAKVEVRKSLCDDFDTPGAVGALQEVVKAVNKYLETKEKAAETIVADCVRGAAEYVTKIFKV 531
+QAEA+ QWVNYF+H+GHL IK KMSKSLKNFITI+QAL+ NT+RQIR+LFLLHKYN PMDY DD M+ A EK FS FF NVK ALR +T + + E E L + + A+ VRK+L DDFDT A+ ALQ++VKAVNKYLET + A+ IV+ VR AA YVT++F+V
Sbjct: 292 AQAEAQSGEKQWVNYFVHSGHLSIKERKMSKSLKNFITIRQALQNNTARQIRMLFLLHKYNAPMDYSDDTMAHATVLEKSFSNFFQNVKVALRSSTIQMSQKWTEHEQDLHNDIDTARYAVRKALLDDFDTATAMTALQDLVKAVNKYLET-QGPAKAIVSLVVRKAAVYVTEMFRV 467
BLAST of mRNA_H-canaliculatus_F_contig12757.2297.1 vs. uniprot
Match: A0A7S3L6K9_9STRA (Cysteine--tRNA ligase n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L6K9_9STRA) HSP 1 Score: 190 bits (482), Expect = 7.220e-54 Identity = 102/178 (57.30%), Postives = 126/178 (70.79%), Query Frame = 1
Query: 1 SQAEAKYDCCQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALEENTSRQIRLLFLLHKYNTPMDYGDDAMSGALAAEKIFSEFFHNVKAALR-RTTARDPARMKEPELTLLSRLADAKVEVRKSLCDDFDTPGAVGALQEVVKAVNKYLETKEKAAETIVADCVRGAAEYVTKIFKV 531
+QAEA+ QWVNYF+H GHLHI+G KMSKSLKNFITI+QALE N++RQIR+LFLLHKYN PMDYGD+ +S A+ AEK F+EFFHNVKAALR + R +TL L D + +V +L DDFDTP A+ L ++VKA N YLET+ +V VR A Y+TK+FKV
Sbjct: 285 AQAEAECGHPQWVNYFVHAGHLHIQGLKMSKSLKNFITIQQALEMNSARQIRMLFLLHKYNAPMDYGDNTLSRAVVAEKSFNEFFHNVKAALRSKDMMEQDQRWTPAAVTLQQTLTDVQAKVGAALRDDFDTPTAMTKLGDLVKATNVYLETE---TTQVVGLVVRSVASYITKMFKV 459
BLAST of mRNA_H-canaliculatus_F_contig12757.2297.1 vs. uniprot
Match: A0A812UK10_SYMMI (Cysteine--tRNA ligase n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812UK10_SYMMI) HSP 1 Score: 189 bits (481), Expect = 7.700e-54 Identity = 94/176 (53.41%), Postives = 123/176 (69.89%), Query Frame = 1
Query: 1 SQAEAKYDCCQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALEENTSRQIRLLFLLHKYNTPMDYGDDAMSGALAAEKIFSEFFHNVKAALRRTTARDPARMKEPELTLLSRLADAKVEVRKSLCDDFDTPGAVGALQEVVKAVNKYLETKEKAAETIVADCVRGAAEYVTKIFK 528
+Q+E D QW+NY+LHTGHL+IKGFKMSKSLKNFITI+QALEE+++RQIR FLLHKYN PMDYGD M+ A+ EKIFSEFFHNVKA LRR P + + ++ L+ K VR +LCDDFDTP AVG L+++++ VNKY+E+ + + A Y+T + +
Sbjct: 273 AQSEGCLDSHQWINYWLHTGHLNIKGFKMSKSLKNFITIRQALEEHSARQIRFCFLLHKYNAPMDYGDGTMTQAVNMEKIFSEFFHNVKATLRRVGVAGPQHVGQRDVALMQFQEATKENVRAALCDDFDTPTAVGHLKDLIREVNKYIESGVVGSAVL-----SSTARYITSVLR 443
BLAST of mRNA_H-canaliculatus_F_contig12757.2297.1 vs. uniprot
Match: A0A7S1XX51_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XX51_9STRA) HSP 1 Score: 184 bits (466), Expect = 1.590e-53 Identity = 95/177 (53.67%), Postives = 118/177 (66.67%), Query Frame = 1
Query: 1 SQAEAKYDCCQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALEENTSRQIRLLFLLHKYNTPMDYGDDAMSGALAAEKIFSEFFHNVKAALRRTTARDPARMKEPELTLLSRLADAKVEVRKSLCDDFDTPGAVGALQEVVKAVNKYLETKEKAAETIVADCVRGAAEYVTKIFKV 531
+Q+EA Y C QWVNYF+H+GHLHIKGFKMSKSLKNFITI ALEE +SRQ+R LFL H+YN PMDYGD M G L E+ F EFFHNVKA LR A P ++ E+ S L K +V +LCDDFDTP + L +V+ N Y + E A V ++ +A Y+TK+F+V
Sbjct: 34 AQSEAYYGCRQWVNYFVHSGHLHIKGFKMSKSLKNFITIGAALEEQSSRQLRFLFLKHRYNQPMDYGDATMQGVLDMERTFVEFFHNVKATLRALPATGPQFWRQKEIAFESALLAIKQQVHDALCDDFDTPTVLQILLRLVRITNVYSKVFEPAPP--VPLIIKESARYITKMFRV 208
BLAST of mRNA_H-canaliculatus_F_contig12757.2297.1 vs. uniprot
Match: D8M9S2_BLAHO (Cysteine--tRNA ligase n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8M9S2_BLAHO) HSP 1 Score: 184 bits (466), Expect = 6.840e-52 Identity = 98/177 (55.37%), Postives = 127/177 (71.75%), Query Frame = 1
Query: 1 SQAEAKYDCCQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALEENTSRQIRLLFLLHKYNTPMDYGDDAMSGALAAEKIFSEFFHNVKAALRRTTARDPARMKEPELTLLSRLADAKVEVRKSLCDDFDTPGAVGALQEVVKAVNKYLETKEKAAETIVADCVRGAAEYVTKIFKV 531
+Q+EA +C Q VNYFLHTGHL+I G KMSKSLKNFITI+Q L++ T QIR+ FLLHK+NT M+Y D AM A A EK+F+EFFHNVKA LR+ TA P R + E+ L ++L A+ V LCDDFDT GA+ AL+ +V+AV +YLET A+ IVA V A +V+++F+V
Sbjct: 241 AQSEAYMECSQSVNYFLHTGHLNIDGLKMSKSLKNFITIRQTLQQFTPSQIRIYFLLHKWNTTMNYSDGAMEEARAKEKLFAEFFHNVKATLRQLTADQPQRWDDAEVQLNAQLDAARTSVHTCLCDDFDTAGAMEALEGLVRAVYRYLET----AKHIVAPLVLSCAGFVSQMFRV 413 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12757.2297.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig12757.2297.1 >prot_H-canaliculatus_F_contig12757.2297.1 ID=prot_H-canaliculatus_F_contig12757.2297.1|Name=mRNA_H-canaliculatus_F_contig12757.2297.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=177bp SQAEAKYDCCQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALEENTSRQback to top mRNA from alignment at H-canaliculatus_F_contig12757:1032..2986+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig12757.2297.1 ID=mRNA_H-canaliculatus_F_contig12757.2297.1|Name=mRNA_H-canaliculatus_F_contig12757.2297.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1955bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12757:1032..2986+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig12757:1032..2986+ >mRNA_H-canaliculatus_F_contig12757.2297.1 ID=mRNA_H-canaliculatus_F_contig12757.2297.1|Name=mRNA_H-canaliculatus_F_contig12757.2297.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1062bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12757:1032..2986+ (Hapterophycus canaliculatus Oshoro5f female)back to top |