prot_H-canaliculatus_F_contig12757.2297.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig12757.2297.1
Unique Nameprot_H-canaliculatus_F_contig12757.2297.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length177
Homology
BLAST of mRNA_H-canaliculatus_F_contig12757.2297.1 vs. uniprot
Match: A0A6H5JK68_9PHAE (Cysteine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JK68_9PHAE)

HSP 1 Score: 319 bits (818), Expect = 6.240e-103
Identity = 156/177 (88.14%), Postives = 168/177 (94.92%), Query Frame = 0
Query:    1 SQAEAKYDCCQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALEENTSRQIRLLFLLHKYNTPMDYGDDAMSGALAAEKIFSEFFHNVKAALRRTTARDPARMKEPELTLLSRLADAKVEVRKSLCDDFDTPGAVGALQEVVKAVNKYLETKEKAAETIVADCVRGAAEYVTKIFKV 177
            +QAEAKYDCCQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQAL+E++SRQIRLLFLLHKYNTPMDYGDDAMSGALAAE+ FSEFFHNVKAALRRTTARDPAR KEPELTL+S L+DAK EV+K LCDDFDTPGA+GALQE+VK VNKY+E KE+A E IVADCVRGAAEYVTKIFKV
Sbjct:  292 AQAEAKYDCCQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALQEHSSRQIRLLFLLHKYNTPMDYGDDAMSGALAAERTFSEFFHNVKAALRRTTARDPARTKEPELTLMSSLSDAKKEVKKCLCDDFDTPGAMGALQELVKKVNKYIEAKERAGEPIVADCVRGAAEYVTKIFKV 468          
BLAST of mRNA_H-canaliculatus_F_contig12757.2297.1 vs. uniprot
Match: A0A835Z463_9STRA (Cysteine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z463_9STRA)

HSP 1 Score: 216 bits (549), Expect = 2.070e-63
Identity = 110/178 (61.80%), Postives = 133/178 (74.72%), Query Frame = 0
Query:    1 SQAEAKYDCCQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALEENTSRQIRLLFLLHKYNTPMDYGDDAMSGALAAEKIFSEFFHNVKAALRRTTARDPARMKEPELTLLSRLADAKVEVRKSLCDDFDTPGAVGAL-QEVVKAVNKYLETKEKAAETIVADCVRGAAEYVTKIFKV 177
            +QAEA Y+C QWVNYFLHTGHLHIKGFKMSKSLKNFITIKQAL+ +T+RQIR+ FLLHKYN PMDYGD+ M+GALA E+ F EFFH VK+ +R  TA D  R+ E E+ L  +L + K  VR +LCDDFDTP A+  L  ++V+ VNKY++ K  A        VR A EYVT+IFKV
Sbjct:  285 AQAEAHYNCAQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALQTHTARQIRMCFLLHKYNDPMDYGDNTMAGALAIERTFVEFFHAVKSVVRAATAVDELRLGEGEIALYRKLEECKSGVRAALCDDFDTPTAIKLLASDLVRTVNKYIQEKTDAGLKSHYIVVRTAGEYVTRIFKV 462          
BLAST of mRNA_H-canaliculatus_F_contig12757.2297.1 vs. uniprot
Match: A0A7S3XKM0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XKM0_HETAK)

HSP 1 Score: 201 bits (511), Expect = 1.810e-61
Identity = 103/176 (58.52%), Postives = 127/176 (72.16%), Query Frame = 0
Query:    1 SQAEAKYDCCQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALEENTSRQIRLLFLLHKYNTPMDYGDDAMSGALAAEKIFSEFFHNVKAALRRTTARDPARMKEPELTLLSRLADAKVEVRKSLCDDFDTPGAVGALQEVVKAVNKYLETKEKAAETIVADCVRGAAEYVTKIFK 176
            +Q+EA   C QWVNYF+HTGHLHIKGFKMSKSLKNFITI+QALE +T RQIRL+FL+ KYN PMDYGD  M+GAL+ E+ F+E+FHNVKA LRR     P +    E+ L   L++AK  V  +LCDDFD P A+  LQ++V+A N YLE     A  +    VR AA+YVTKIF+
Sbjct:   42 AQSEAHAGCRQWVNYFVHTGHLHIKGFKMSKSLKNFITIRQALETHTPRQIRLVFLMSKYNAPMDYGDSTMAGALSIERSFAEYFHNVKAVLRRDGVAGPQKWGAREVALGRALSEAKAGVHAALCDDFDCPSALKELQKLVRASNVYLEGNAAPATLL----VRAAAQYVTKIFR 213          
BLAST of mRNA_H-canaliculatus_F_contig12757.2297.1 vs. uniprot
Match: A0A6U0T1A9_9STRA (Cysteine--tRNA ligase n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A6U0T1A9_9STRA)

HSP 1 Score: 196 bits (498), Expect = 3.990e-56
Identity = 102/177 (57.63%), Postives = 123/177 (69.49%), Query Frame = 0
Query:    1 SQAEAKYDCCQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALEENTSRQIRLLFLLHKYNTPMDYGDDAMSGALAAEKIFSEFFHNVKAALRRTTARDPARMKEPELTLLSRLADAKVEVRKSLCDDFDTPGAVGALQEVVKAVNKYLETKEKAAETIVADCVRGAAEYVTKIFKV 177
            +QAEA   C QWVNYF+H GHLHIKGFKMSKSLKNFITI+ ALE NT+RQIRL FLLHKYN PMDYGD+ MS +L  EK+F EFFHNVKA LR     +  R  E    L + L+D K  V  +L DDFDTP ++ AL ++VKA N YL++      T V   +R AA Y+T IF++
Sbjct:  291 AQAEAHSGCNQWVNYFVHAGHLHIKGFKMSKSLKNFITIRDALENNTARQIRLCFLLHKYNAPMDYGDNTMSHSLVTEKLFVEFFHNVKAVLREGNIINIQRWDESARQLQNTLSDIKSRVDAALRDDFDTPASINALSDLVKATNLYLDSCVARQITPVNLLLRNAAVYITHIFRI 467          
BLAST of mRNA_H-canaliculatus_F_contig12757.2297.1 vs. uniprot
Match: A0A7S1Y9A2_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y9A2_9STRA)

HSP 1 Score: 193 bits (490), Expect = 4.510e-56
Identity = 99/177 (55.93%), Postives = 123/177 (69.49%), Query Frame = 0
Query:    1 SQAEAKYDCCQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALEENTSRQIRLLFLLHKYNTPMDYGDDAMSGALAAEKIFSEFFHNVKAALRRTTARDPARMKEPELTLLSRLADAKVEVRKSLCDDFDTPGAVGALQEVVKAVNKYLETKEKAAETIVADCVRGAAEYVTKIFKV 177
            +QAEA   C QWVNYF+H GHLHIKGFKMSKSLKNFITI+QALE+N++RQIRL FL+HKYN+PMDYGD+ MS A+ AEK+F EFF N KAALR T  +D  +       L   L   +  V  +L DDFDTP  + AL ++VK+ N Y++      ETI +  +   A YVT+IFKV
Sbjct:  145 AQAEAHSGCTQWVNYFVHAGHLHIKGFKMSKSLKNFITIRQALEQNSARQIRLCFLMHKYNSPMDYGDNTMSHAMTAEKLFKEFFLNTKAALRATAMKDSKKWTPATKDLQKTLHQTQAAVDVALKDDFDTPAVMSALADLVKSTNSYMQDN---VETINSLLLNNVAAYVTRIFKV 318          
BLAST of mRNA_H-canaliculatus_F_contig12757.2297.1 vs. uniprot
Match: A0A7S1FUV2_9STRA (Cysteine--tRNA ligase n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FUV2_9STRA)

HSP 1 Score: 191 bits (485), Expect = 2.930e-54
Identity = 105/177 (59.32%), Postives = 130/177 (73.45%), Query Frame = 0
Query:    1 SQAEAKYDCCQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALEENTSRQIRLLFLLHKYNTPMDYGDDAMSGALAAEKIFSEFFHNVKAALRRTTARDPARMKEPELTLLSRLADAKVEVRKSLCDDFDTPGAVGALQEVVKAVNKYLETKEKAAETIVADCVRGAAEYVTKIFKV 177
            +QAEA+    QWVNYF+H+GHL IK  KMSKSLKNFITI+QAL+ NT+RQIR+LFLLHKYN PMDY DD M+ A   EK FS FF NVK ALR +T +   +  E E  L + +  A+  VRK+L DDFDT  A+ ALQ++VKAVNKYLET +  A+ IV+  VR AA YVT++F+V
Sbjct:  292 AQAEAQSGEKQWVNYFVHSGHLSIKERKMSKSLKNFITIRQALQNNTARQIRMLFLLHKYNAPMDYSDDTMAHATVLEKSFSNFFQNVKVALRSSTIQMSQKWTEHEQDLHNDIDTARYAVRKALLDDFDTATAMTALQDLVKAVNKYLET-QGPAKAIVSLVVRKAAVYVTEMFRV 467          
BLAST of mRNA_H-canaliculatus_F_contig12757.2297.1 vs. uniprot
Match: A0A7S3L6K9_9STRA (Cysteine--tRNA ligase n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L6K9_9STRA)

HSP 1 Score: 190 bits (482), Expect = 7.220e-54
Identity = 102/178 (57.30%), Postives = 126/178 (70.79%), Query Frame = 0
Query:    1 SQAEAKYDCCQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALEENTSRQIRLLFLLHKYNTPMDYGDDAMSGALAAEKIFSEFFHNVKAALR-RTTARDPARMKEPELTLLSRLADAKVEVRKSLCDDFDTPGAVGALQEVVKAVNKYLETKEKAAETIVADCVRGAAEYVTKIFKV 177
            +QAEA+    QWVNYF+H GHLHI+G KMSKSLKNFITI+QALE N++RQIR+LFLLHKYN PMDYGD+ +S A+ AEK F+EFFHNVKAALR +       R     +TL   L D + +V  +L DDFDTP A+  L ++VKA N YLET+      +V   VR  A Y+TK+FKV
Sbjct:  285 AQAEAECGHPQWVNYFVHAGHLHIQGLKMSKSLKNFITIQQALEMNSARQIRMLFLLHKYNAPMDYGDNTLSRAVVAEKSFNEFFHNVKAALRSKDMMEQDQRWTPAAVTLQQTLTDVQAKVGAALRDDFDTPTAMTKLGDLVKATNVYLETE---TTQVVGLVVRSVASYITKMFKV 459          
BLAST of mRNA_H-canaliculatus_F_contig12757.2297.1 vs. uniprot
Match: A0A812UK10_SYMMI (Cysteine--tRNA ligase n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812UK10_SYMMI)

HSP 1 Score: 189 bits (481), Expect = 7.700e-54
Identity = 94/176 (53.41%), Postives = 123/176 (69.89%), Query Frame = 0
Query:    1 SQAEAKYDCCQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALEENTSRQIRLLFLLHKYNTPMDYGDDAMSGALAAEKIFSEFFHNVKAALRRTTARDPARMKEPELTLLSRLADAKVEVRKSLCDDFDTPGAVGALQEVVKAVNKYLETKEKAAETIVADCVRGAAEYVTKIFK 176
            +Q+E   D  QW+NY+LHTGHL+IKGFKMSKSLKNFITI+QALEE+++RQIR  FLLHKYN PMDYGD  M+ A+  EKIFSEFFHNVKA LRR     P  + + ++ L+      K  VR +LCDDFDTP AVG L+++++ VNKY+E+    +  +        A Y+T + +
Sbjct:  273 AQSEGCLDSHQWINYWLHTGHLNIKGFKMSKSLKNFITIRQALEEHSARQIRFCFLLHKYNAPMDYGDGTMTQAVNMEKIFSEFFHNVKATLRRVGVAGPQHVGQRDVALMQFQEATKENVRAALCDDFDTPTAVGHLKDLIREVNKYIESGVVGSAVL-----SSTARYITSVLR 443          
BLAST of mRNA_H-canaliculatus_F_contig12757.2297.1 vs. uniprot
Match: A0A7S1XX51_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XX51_9STRA)

HSP 1 Score: 184 bits (466), Expect = 1.590e-53
Identity = 95/177 (53.67%), Postives = 118/177 (66.67%), Query Frame = 0
Query:    1 SQAEAKYDCCQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALEENTSRQIRLLFLLHKYNTPMDYGDDAMSGALAAEKIFSEFFHNVKAALRRTTARDPARMKEPELTLLSRLADAKVEVRKSLCDDFDTPGAVGALQEVVKAVNKYLETKEKAAETIVADCVRGAAEYVTKIFKV 177
            +Q+EA Y C QWVNYF+H+GHLHIKGFKMSKSLKNFITI  ALEE +SRQ+R LFL H+YN PMDYGD  M G L  E+ F EFFHNVKA LR   A  P   ++ E+   S L   K +V  +LCDDFDTP  +  L  +V+  N Y +  E A    V   ++ +A Y+TK+F+V
Sbjct:   34 AQSEAYYGCRQWVNYFVHSGHLHIKGFKMSKSLKNFITIGAALEEQSSRQLRFLFLKHRYNQPMDYGDATMQGVLDMERTFVEFFHNVKATLRALPATGPQFWRQKEIAFESALLAIKQQVHDALCDDFDTPTVLQILLRLVRITNVYSKVFEPAPP--VPLIIKESARYITKMFRV 208          
BLAST of mRNA_H-canaliculatus_F_contig12757.2297.1 vs. uniprot
Match: D8M9S2_BLAHO (Cysteine--tRNA ligase n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8M9S2_BLAHO)

HSP 1 Score: 184 bits (466), Expect = 6.840e-52
Identity = 98/177 (55.37%), Postives = 127/177 (71.75%), Query Frame = 0
Query:    1 SQAEAKYDCCQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALEENTSRQIRLLFLLHKYNTPMDYGDDAMSGALAAEKIFSEFFHNVKAALRRTTARDPARMKEPELTLLSRLADAKVEVRKSLCDDFDTPGAVGALQEVVKAVNKYLETKEKAAETIVADCVRGAAEYVTKIFKV 177
            +Q+EA  +C Q VNYFLHTGHL+I G KMSKSLKNFITI+Q L++ T  QIR+ FLLHK+NT M+Y D AM  A A EK+F+EFFHNVKA LR+ TA  P R  + E+ L ++L  A+  V   LCDDFDT GA+ AL+ +V+AV +YLET    A+ IVA  V   A +V+++F+V
Sbjct:  241 AQSEAYMECSQSVNYFLHTGHLNIDGLKMSKSLKNFITIRQTLQQFTPSQIRIYFLLHKWNTTMNYSDGAMEEARAKEKLFAEFFHNVKATLRQLTADQPQRWDDAEVQLNAQLDAARTSVHTCLCDDFDTAGAMEALEGLVRAVYRYLET----AKHIVAPLVLSCAGFVSQMFRV 413          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12757.2297.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JK68_9PHAE6.240e-10388.14Cysteine--tRNA ligase n=2 Tax=Ectocarpus TaxID=287... [more]
A0A835Z463_9STRA2.070e-6361.80Cysteine--tRNA ligase n=1 Tax=Tribonema minus TaxI... [more]
A0A7S3XKM0_HETAK1.810e-6158.52Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A6U0T1A9_9STRA3.990e-5657.63Cysteine--tRNA ligase n=1 Tax=Eucampia antarctica ... [more]
A0A7S1Y9A2_9STRA4.510e-5655.93Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S1FUV2_9STRA2.930e-5459.32Cysteine--tRNA ligase n=2 Tax=Corethron hystrix Ta... [more]
A0A7S3L6K9_9STRA7.220e-5457.30Cysteine--tRNA ligase n=1 Tax=Amphora coffeiformis... [more]
A0A812UK10_SYMMI7.700e-5453.41Cysteine--tRNA ligase n=1 Tax=Symbiodinium microad... [more]
A0A7S1XX51_9STRA1.590e-5353.67Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
D8M9S2_BLAHO6.840e-5255.37Cysteine--tRNA ligase n=1 Tax=Blastocystis hominis... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032678tRNA synthetases class I, catalytic domainPFAMPF01406tRNA-synt_1ecoord: 2..73
e-value: 1.9E-21
score: 76.7
IPR014729Rossmann-like alpha/beta/alpha sandwich foldGENE3D3.40.50.620coord: 1..67
e-value: 4.2E-23
score: 83.7
NoneNo IPR availableGENE3D1.20.120.640coord: 68..177
e-value: 1.3E-7
score: 33.9
NoneNo IPR availablePANTHERPTHR10890:SF3CYSTEINE--TRNA LIGASE, CYTOPLASMICcoord: 2..177
NoneNo IPR availableSUPERFAMILY52374Nucleotidylyl transferasecoord: 5..74
IPR015273Cysteinyl-tRNA synthetase, class Ia, DALRPFAMPF09190DALR_2coord: 121..165
e-value: 1.1E-6
score: 29.0
IPR024909Cysteinyl-tRNA synthetase/mycothiol ligasePANTHERPTHR10890CYSTEINYL-TRNA SYNTHETASEcoord: 2..177
IPR009080Aminoacyl-tRNA synthetase, class Ia, anticodon-bindingSUPERFAMILY47323Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasescoord: 107..159

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12757contigH-canaliculatus_F_contig12757:1032..2986 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12757.2297.1mRNA_H-canaliculatus_F_contig12757.2297.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig12757 1032..2986 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig12757.2297.1 ID=prot_H-canaliculatus_F_contig12757.2297.1|Name=mRNA_H-canaliculatus_F_contig12757.2297.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=177bp
SQAEAKYDCCQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALEENTSRQ
IRLLFLLHKYNTPMDYGDDAMSGALAAEKIFSEFFHNVKAALRRTTARDP
ARMKEPELTLLSRLADAKVEVRKSLCDDFDTPGAVGALQEVVKAVNKYLE
TKEKAAETIVADCVRGAAEYVTKIFKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009080tRNAsynth_Ia_anticodon-bd
IPR024909Cys-tRNA/MSH_ligase
IPR015273Cys-tRNA-synt_Ia_DALR
IPR014729Rossmann-like_a/b/a_fold
IPR032678tRNA-synt_1_cat_dom