mRNA_H-canaliculatus_F_contig127.2249.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig127.2249.1 vs. uniprot
Match: D7G6P0_ECTSI (Hexosyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6P0_ECTSI) HSP 1 Score: 581 bits (1497), Expect = 4.000e-195 Identity = 296/394 (75.13%), Postives = 334/394 (84.77%), Query Frame = 3
Query: 123 DAPMHSPTTSRRRPRRPTSGTGSHLRYTDSRQKRSHASVVRLLLSTIDLCSKNTAKCALLTCASGMAWASLIVWILGPAVSTPGVIHPVGDDHQQQTVPG-SGEGSAFPIGDHNSDGFWLPGWTPLGHHSRFLGREAFPEQFEHWGEAGEVVINGVDVAPLA-VGDEVLPRADLVLAILSGDDEEAKIKRDTLRDLYDKYEGRISVGGKQSKGENKEPSDMSFRVVFVVTRSTASSNGDLVGDVLYVNAPDGYRNIVYKVKHMMGLVRHIDFKFLLKADDDTFVCVERLAGFLHDQPEENKDKIYAGVPTACSS-TNPSKMVGRVIKDSENKWYDQRFVHHTLAGLDCYPVYMQGAFYVLAQPLVEHLYRGREHYDTFVNEDVTVGSWLLGVSK 1295
+AP HSPT SRRRPRRP SGT HL +DS+QK S SV RL LS DL +K T KCALLTCASGMAWASLIVWILGPAVS+P V D HQQQ VP S G +FPI D +G LPGWTPLGHHSRF+GREAFPEQFEHWGE EVVI+ +DV PL GD++LPR DL+LAILSGDD+ A++KRDT+R+LYDKY G ++VGG++S+ +N+E +M F+V+FVVTRSTA +G+LVGDVLYVNAPDGYRNIVYKVKHMMGLVRHIDFKFLLKADDDTFVCVERLA FLH+QPEE+KDKIYAGVPTAC+S NPS VGRVIKD ++KWYDQ+FVHHTLAGLDCYPVYMQGAFYVLAQPLVEHLYRGREHYDTF+NEDVTVGSWLLGV +
Sbjct: 16 EAPAHSPTGSRRRPRRPASGTSLHL--SDSQQKSSRPSVQRLFLSAADLLAKTTTKCALLTCASGMAWASLIVWILGPAVSSPDTTTQV-DQHQQQEVPTLSPAGGSFPIVD---EGSLLPGWTPLGHHSRFMGREAFPEQFEHWGEDQEVVIHSMDVGPLTDEGDQLLPRTDLLLAILSGDDKAARLKRDTIRELYDKYGGWVTVGGERSQEQNEETVEMEFQVIFVVTRSTAPPDGELVGDVLYVNAPDGYRNIVYKVKHMMGLVRHIDFKFLLKADDDTFVCVERLANFLHNQPEESKDKIYAGVPTACNSPANPSVKVGRVIKDHKDKWYDQKFVHHTLAGLDCYPVYMQGAFYVLAQPLVEHLYRGREHYDTFINEDVTVGSWLLGVDR 403
BLAST of mRNA_H-canaliculatus_F_contig127.2249.1 vs. uniprot
Match: D8LT07_ECTSI (Beta-1,3-n-acetylglucosaminyltransferase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT07_ECTSI) HSP 1 Score: 286 bits (732), Expect = 9.890e-81 Identity = 141/263 (53.61%), Postives = 182/263 (69.20%), Query Frame = 3
Query: 516 LGREAFPEQFEHWGEAGEVVINGVDVAPLAVGDEVLPRADLVLAILSGDDEEAKIKRDTLRDLYDKYEGRISVGGKQS--KGENKEPSDMSFRVVFVVTRSTASSNGDLVGDVLYVNAPDGYRNIVYKVKHMMGLVRHIDFKFLLKADDDTFVCVERLAGFLHDQPEENKDKIYAGVPTACS-STNPSKMVGRVIKDSENKWYDQRFVHHTLAGLDCYPVYMQGAFYVLAQPLVEHLYRGREHYDTFVNEDVTVGSWLLGVSK 1295
LGR + E G VV+ ++ A + P+ DL+L I SG E KR+ LR +YDKYEG + VGG S +G+N EP + + VVFV+++ TA G+LVGD+LYV P+GYRNIV K K M+ LVRH DF FLLKADDD+FVC+ R+A LHD E + K+Y GVPTAC+ STNP GRV+K+ +++W+D ++V HTL GLDC+P YMQGAFY+LAQPLVEHLYRG EH + F NEDVT+GSWL+GV +
Sbjct: 321 LGRRSGKRGTEWDGRVSSVVMGELEPVGTA---KTRPKVDLLLTIFSGTTEADAAKRELLRQIYDKYEGWVKVGGPNSLTEGKNPEPREFTVSVVFVMSKETAPPEGELVGDILYVAVPEGYRNIVLKTKAMLCLVRHFDFDFLLKADDDSFVCLTRIASMLHDLDPEIRGKVYVGVPTACNQSTNPDYWNGRVMKNPDHRWFDSKYVQHTLGGLDCFPAYMQGAFYILAQPLVEHLYRGHEHLECFTNEDVTIGSWLMGVDR 580
BLAST of mRNA_H-canaliculatus_F_contig127.2249.1 vs. uniprot
Match: A0A6H5KLW3_9PHAE (Hexosyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLW3_9PHAE) HSP 1 Score: 271 bits (693), Expect = 2.370e-79 Identity = 126/208 (60.58%), Postives = 159/208 (76.44%), Query Frame = 3
Query: 681 KRDTLRDLYDKYEGRISVGGKQS--KGENKEPSDMSFRVVFVVTRSTASSNGDLVGDVLYVNAPDGYRNIVYKVKHMMGLVRHIDFKFLLKADDDTFVCVERLAGFLHDQPEENKDKIYAGVPTACS-STNPSKMVGRVIKDSENKWYDQRFVHHTLAGLDCYPVYMQGAFYVLAQPLVEHLYRGREHYDTFVNEDVTVGSWLLGVSK 1295
KR+ LR +YDKYEG + VGG S +G N EP + + VVFV+++ TA G+LVGD+LYV P+GYRNIV K K M+ LVRH DF+FLLKADDD+FVC+ R+A LHD E K+YAGVPTAC+ STNP GRV+K+ +++W+D ++V HTL GLDC+P YMQGAFY+LAQPLVEHLYRG EH + F NEDVT+GSWL+GV +
Sbjct: 37 KRELLRQIYDKYEGWVKVGGPNSLTEGTNPEPREFTVSVVFVMSKETAPPEGELVGDILYVAVPEGYRNIVLKTKAMLCLVRHFDFEFLLKADDDSFVCLTRIASMLHDLDPEISGKVYAGVPTACNQSTNPDYWNGRVMKNPDHRWFDSKYVQHTLGGLDCFPAYMQGAFYILAQPLVEHLYRGHEHLECFTNEDVTIGSWLMGVDR 244
BLAST of mRNA_H-canaliculatus_F_contig127.2249.1 vs. uniprot
Match: A0A835YWI3_9STRA (Hexosyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWI3_9STRA) HSP 1 Score: 247 bits (630), Expect = 2.130e-69 Identity = 122/256 (47.66%), Postives = 174/256 (67.97%), Query Frame = 3
Query: 606 VGDEVLPRADLVLAILSGDDEEAKIKRDTLRDLYDKYEGRISVG-GKQSKGENKEPSDMSFRVVFVVTRSTASSNGDLVGDVLYVNAPDGYRNIVYKVKHMMGLVRHIDFKFLLKADDDTFVCVERLAGFLHDQPEENKDKIYAGVPTACSSTNPSKMVGRVIKDSENKWYDQRFVHHTLAGLDCYPVYMQGAFYVLAQPLVEHLYRGREHYDTFVNEDVTVGSWLLGVSKGGECSSNIPGR-----TTLSFDFWH 1355
V D LP D++L + SGD E+ +RD +R +Y +Y GR+ + GK+S+ + K F++VFV RS A +G L GD L +NAPDGYRNIV+K K M+ L++H++FK+L+K+DDDTFVCV+++ LH+ PEE K K+YAGVPT C+ +MVGRV D +KWYD+R+V HT+ ++CYP Y QGA Y+L++ LVE LY+GR+H TF+NEDVT+G+WL+GV + ++ G T S+ F H
Sbjct: 105 VNDSSLPTYDMLLVVFSGDSEDDAKRRDLMRRIYGRYRGRVVLNRGKKSRKKYK------FKLVFVRGRSDAPEDGVLNGDTLLINAPDGYRNIVHKTKGMVSLLKHVNFKYLMKSDDDTFVCVQQVFHRLHNLPEETKKKVYAGVPTHCNMPG-HQMVGRVFSDPTHKWYDERYVEHTMGSMECYPPYHQGAGYILSRSLVEFLYKGRDHLLTFINEDVTMGTWLMGVDRSVVSLRDLDGARLWECTCASYRFAH 353
BLAST of mRNA_H-canaliculatus_F_contig127.2249.1 vs. uniprot
Match: A0A6H5JHW0_9PHAE (Hexosyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHW0_9PHAE) HSP 1 Score: 222 bits (565), Expect = 3.930e-60 Identity = 112/242 (46.28%), Postives = 153/242 (63.22%), Query Frame = 3
Query: 573 VINGVDVAPLAVGDEVLPRADLVLAILSGDDEEAKIKRDTLRDLYDKYEGRISVGGKQSKGENKEPSDMSFRVVFVVTRSTASSNGDLVGDVLYVNAPDGYRNIVYKVKHMMGLVRHIDFKFLLKADDDTFVCVERLAGFLHDQPEENKDKIYAGVPTACS-STNPSKMVGRVIKDSENKWYDQRFVHHTLAGLDCYPVYMQGAFYVLAQPLVEHLYRGREHYDTFVNEDVTVGSWLLGVSK 1295
++ D P+A + P D +L + SGDD +A KRD +R++Y Y G+I + E + +F+V++VV A GDL+ DVL+V GYRNI K K M+ V+H+ FK+LLK DDDTFVC+ R A +H P K K+Y G+PTAC NP+ VG+VI D ++KWYD ++++HT+ GLDCYPVYMQGAFY+L+ PLVE L +G TF NEDVT+G WL GV +
Sbjct: 126 ILGRSDDWPVAWPGDTRPYFDYLLVVFSGDDTDALAKRDYMREMYGTYGGQILI-----TDERGQAFIYTFKVLYVVGHPGAVDMGDLMDDVLFVKVEKGYRNIAAKTKKMLEAVKHVRFKYLLKTDDDTFVCLRRTASQMHLVPAHIKPKVYGGIPTACHLPNNPNDAVGKVIVDMDDKWYDGKYLNHTMNGLDCYPVYMQGAFYILSYPLVEFLNQGSSKLLTFDNEDVTIGLWLHGVDR 362
BLAST of mRNA_H-canaliculatus_F_contig127.2249.1 vs. uniprot
Match: D7FQB9_ECTSI (Hexosyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQB9_ECTSI) HSP 1 Score: 219 bits (558), Expect = 9.790e-59 Identity = 110/232 (47.41%), Postives = 148/232 (63.79%), Query Frame = 3
Query: 603 AVGDEVLPRADLVLAILSGDDEEAKIKRDTLRDLYDKYEGRISVGGKQSKGENKEPSDMSFRVVFVVTRSTASSNGDLVGDVLYVNAPDGYRNIVYKVKHMMGLVRHIDFKFLLKADDDTFVCVERLAGFLHDQPEENKDKIYAGVPTACS-STNPSKMVGRVIKDSENKWYDQRFVHHTLAGLDCYPVYMQGAFYVLAQPLVEHLYRGREHYDTFVNEDVTVGSWLLGVSK 1295
++G + D +L + SGDD +A KRD +R +Y Y G+I + E + +F+V++VV A+ GDL+ DVL+V GYRNI K K M+ V+H+ FK+LLKADDDTFVC+ R A +H P K K+Y G+PTAC NP VG+VI D + KWYD ++++HT+ GLDCYPVYMQGAFY+L+ PLVE L +G TF NEDVT+G WL GV +
Sbjct: 176 SLGGDTRAYFDYLLVVFSGDDTDALAKRDYMRKMYGTYGGQILI-----TDERGQAFIYTFKVLYVVGHPGAADMGDLMDDVLFVKVEKGYRNIAAKTKKMLEAVKHVRFKYLLKADDDTFVCLRRTASQMHLVPAHIKPKVYGGIPTACHLPNNPDDEVGKVIVDMDEKWYDGKYLNHTMNGLDCYPVYMQGAFYILSYPLVEFLNQGSSKLLTFDNEDVTIGLWLHGVDR 402
BLAST of mRNA_H-canaliculatus_F_contig127.2249.1 vs. uniprot
Match: A0A835YNB7_9STRA (Hexosyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNB7_9STRA) HSP 1 Score: 208 bits (529), Expect = 1.130e-57 Identity = 96/172 (55.81%), Postives = 128/172 (74.42%), Query Frame = 3
Query: 783 FRVVFVVTRSTASSNGDLVGDVLYVNAPDGYRNIVYKVKHMMGLVRHIDFKFLLKADDDTFVCVERLAGFLHDQPEENKDKIYAGVPTACS-STNPSKMVGRVIKDSENKWYDQRFVHHTLAGLDCYPVYMQGAFYVLAQPLVEHLYRGREHYDTFVNEDVTVGSWLLGVSK 1295
+V+F+V+ AS GDLVGD+LYV P GYRNIV K K M+ +V H + K+L+K+DDDTFVC+ R+A + P K+K+YAG+PTAC +NP +GRVIKD +KW+D +FV HTL GLDCYP Y QGAFY+L++PLV++L++GR TF NEDVT+GSWL+GV +
Sbjct: 1 MQVLFLVSHIDASEEGDLVGDILYVQCPAGYRNIVQKTKAMLSIVTHFNHKYLMKSDDDTFVCLNRVAKRMFTLPPAVKEKVYAGIPTACGLESNPH--IGRVIKDPNHKWHDAKFVSHTLGGLDCYPAYHQGAFYLLSEPLVQYLHQGRSKLLTFTNEDVTMGSWLMGVDR 170
BLAST of mRNA_H-canaliculatus_F_contig127.2249.1 vs. uniprot
Match: A0A835Z4X8_9STRA (Hexosyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4X8_9STRA) HSP 1 Score: 192 bits (487), Expect = 2.260e-50 Identity = 109/278 (39.21%), Postives = 147/278 (52.88%), Query Frame = 3
Query: 618 VLPRADLVLAILSGDDEEAKIKRDTLRDLYDKYEGRISVGGKQSKGENKEPSDMSFRVVFVVTRSTASSNGDLVGDVLYVNAPDGYRNIVYKVKHMMGLVRHIDFKFLLKADDDTFVCVERLAGFLHDQPEENKDKIYAGVPTACSSTNPSKMVGRVIKDSENKWYDQRFVHHTLAGLDCYPVYM----------------------------------------------------QGAFYVLAQPLVEHLYRGREHYDTFVNEDVTVGSWLLGVSK 1295
V P D VL I SGD E+A KR+ LR Y Y + V + N D + +V+F+V+ A +G L GDVLYV P+GYRNIV K K M+ +V H +FK+L+K+DDDT VC+ ++A + P +D++YAGVPTAC S GR+I+D +KW+D +FV HTL GLDCYP Y QGAFY+L+QPLV HL+RGR F NEDVTVG+W++ +++
Sbjct: 25 VTPYFDFVLTIFSGDSEQAAEKREQLRTSYSAYSKGLHV-----QDANGLSHDYTVKVLFLVSHPDAPEDGLLDGDVLYVRCPEGYRNIVLKTKAMLSVVAHFNFKYLMKSDDDTVVCLNKVAKRMAVLPPAVQDRVYAGVPTACGLEAHSDS-GRIIRDPTHKWHDAKFVAHTLGGLDCYPAYXXXXXXXXXXXXXXXXXXXXXRQRGLRGGACGQSLLELKLAVHNSLDKYPAYHQGAFYLLSQPLVAHLHRGRAQLVAFANEDVTVGAWMMALNR 296
BLAST of mRNA_H-canaliculatus_F_contig127.2249.1 vs. uniprot
Match: A0A835YTA1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTA1_9STRA) HSP 1 Score: 161 bits (408), Expect = 5.740e-38 Identity = 93/211 (44.08%), Postives = 108/211 (51.18%), Query Frame = 3
Query: 816 ASSNGDLVGDVLYVNAPDGYRNIVYKVKHMMGLVRHIDFKFLLKADDDTFVCVERLAGFLH---------------------------------------------------DQPEENKDKIYAGVPTACSSTNPSKMVGRVIKDSENKWYDQRFVHHTLAGLDCYPVYMQGAFYVLAQPLVEHLYRGREHYDTFVNEDVTVGSWLLGVSK 1295
A +G L GDV +V AP GY NI K MM L H F+FL K + DTFVC+ RL L Q + + ++YAGVPTAC + VGRVI D N+WYD +FV HT+ GL CYPVYMQGAFYVLAQPLVE L GR H+ TF NEDVTVGSWLLGV +
Sbjct: 311 APDDGRLDGDVFWVRAPPGYNNIAEMTKQMMAL--HFLFRFLSKINGDTFVCLRRLVTLLAVQXXXXXXXXXXXXXXXXXXXRLVQXXXXXXXXXXXXXXXXXXXXXVTLLAAQTQATQRRLYAGVPTACGVHRNNPNVGRVIMDKTNRWYDPKFVTHTMGGLPCYPVYMQGAFYVLAQPLVEFLNLGRPHWVTFQNEDVTVGSWLLGVDR 519
BLAST of mRNA_H-canaliculatus_F_contig127.2249.1 vs. uniprot
Match: A0A835YVE3_9STRA (Hexosyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVE3_9STRA) HSP 1 Score: 140 bits (354), Expect = 2.890e-33 Identity = 95/284 (33.45%), Postives = 133/284 (46.83%), Query Frame = 3
Query: 552 WGEAGEVVINGVDVAP----LAVGDEVLPRADLVLAILSGDDEEAKIKRDTLRDLYDKYEGRI---SVGGKQSKGENKEPSDMSFRVVFVVTRSTASSNGDLVGDVLYVNAPDGYRNIVYKVKHMMGLVRHIDFKFLLKADDDTFVCVERLAGFLHDQPEENKDKIYAGVPTACSSTNPSKMVGRVIKDSENKWYDQRFVHHTLAGLDCYPVYMQGAFYVLAQPLVEHLYRGREHYDTFVNEDVTVGSWLLGVSK-----GGE----CSSNIPGRTTLSFDFWH 1355
W E +V+ G AP V LP DL +A+L DEE ++KR +R +Y +Y SVG SFR FVV A G L G+ VN P+GY + K M L H+DF+FL+K D DT+ C++R+ LH + + ++YAG+ C P+ +K +D +F T + C+P+Y QGAFY+L + LVEHL R R+ NED VG WLLG + GG+ C + G F+H
Sbjct: 17 WLERAVMVLLGEAAAPGGASAVVAKPALPYVDLAIAVLIRGDEEEELKR--VRRIYWRYPNATVTTSVGS------------WSFRKYFVVADPNAPPEGTLTGEFFRVNVPNGYDRLADKTLATMALRHHLDFRFLVKTDADTYPCLQRVIETLHARGVAREPRLYAGLLNRCGKLFPAG----------HKLHDAQFQAATGGVVPCHPMYHQGAFYILGRALVEHLDRSRDDLQVMSNEDAMVGLWLLGARRVLVDIGGDFHCACFTKPRGEPGNDLPFYH 276 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig127.2249.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig127.2249.1 >prot_H-canaliculatus_F_contig127.2249.1 ID=prot_H-canaliculatus_F_contig127.2249.1|Name=mRNA_H-canaliculatus_F_contig127.2249.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=497bp MNPKSSALDKGDNDDAPMHSPTTSRRRPRRPTSGTGSHLRYTDSRQKRSHback to top mRNA from alignment at H-canaliculatus_F_contig127:32997..38914- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig127.2249.1 ID=mRNA_H-canaliculatus_F_contig127.2249.1|Name=mRNA_H-canaliculatus_F_contig127.2249.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=5918bp|location=Sequence derived from alignment at H-canaliculatus_F_contig127:32997..38914- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig127:32997..38914- >mRNA_H-canaliculatus_F_contig127.2249.1 ID=mRNA_H-canaliculatus_F_contig127.2249.1|Name=mRNA_H-canaliculatus_F_contig127.2249.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2982bp|location=Sequence derived from alignment at H-canaliculatus_F_contig127:32997..38914- (Hapterophycus canaliculatus Oshoro5f female)back to top |