mRNA_H-canaliculatus_F_contig12647.2213.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig12647.2213.1
Unique NamemRNA_H-canaliculatus_F_contig12647.2213.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
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BLAST of mRNA_H-canaliculatus_F_contig12647.2213.1 vs. uniprot
Match: A0A6H5KJR1_9PHAE (ABC protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KJR1_9PHAE)

HSP 1 Score: 387 bits (993), Expect = 6.820e-129
Identity = 192/197 (97.46%), Postives = 195/197 (98.98%), Query Frame = 1 
Query:    1 AKRYVLVVEHDLAVLDYLSDFICCLYGTPSAYGVVTMPFSVREGINIFLAGFVPTENLRFRDVTLDFKMTMTAEEVLANGNTNLIYTYPSMTKTMRSKTGKQFKLHVEEGQFADSEILVLLGENGTGKTTFIRMLAGLLKSDEQMEAEASGDQDLADSLGVPNLNVSYKPQKISPRFEGTVRQLLHKRIRDAYIHPQ 591
            AKRYVLVVEHDLAVLDYLSDFICCLYGTPSAYGVVTMPFSVREGINIFLAGFVPTENLRFRDVTLDFKMTM+AEEVLANGNTNLIYTYP MTKTMRSKTGKQFKLHVEEGQFADSEILVLLGENGTGKTTFIRMLAGLLKSDEQ EAEA+GDQ+LADSLGVPNLNVSYKPQKISPRFEGTVRQLLHKRIRDAYIHPQ
Sbjct:  336 AKRYVLVVEHDLAVLDYLSDFICCLYGTPSAYGVVTMPFSVREGINIFLAGFVPTENLRFRDVTLDFKMTMSAEEVLANGNTNLIYTYPGMTKTMRSKTGKQFKLHVEEGQFADSEILVLLGENGTGKTTFIRMLAGLLKSDEQTEAEAAGDQELADSLGVPNLNVSYKPQKISPRFEGTVRQLLHKRIRDAYIHPQ 532
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BLAST of mRNA_H-canaliculatus_F_contig12647.2213.1 vs. uniprot
Match: A0A7S2UWB9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWB9_9STRA)

HSP 1 Score: 298 bits (764), Expect = 1.960e-95
Identity = 143/197 (72.59%), Postives = 169/197 (85.79%), Query Frame = 1 
Query:    4 KRYVLVVEHDLAVLDYLSDFICCLYGTPSAYGVVTMPFSVREGINIFLAGFVPTENLRFRDVTLDFKMTMTAEEVLANGNTNLIYTYPSMTKTMRSKTG-KQFKLHVEEGQFADSEILVLLGENGTGKTTFIRMLAGLLKSDEQMEAEASGDQDLADSLGVPNLNVSYKPQKISPRFEGTVRQLLHKRIRDAYIHPQ 591
             RYVLVVEHDLAVLDYLSD+ICCLYG PSAYGVVTMPFS REGINIFLAG+VPTENLRFR+  L FK++ TA++++    +N +Y YP MTKTM +KT  ++F LHVE G F DSEI+V+LGENGTGKTTFIRM+AGLLKSDEQ  AE +GD+  A++ GVP LNVSYKPQKISP+F+GTVRQLLHKR+R+AY+HPQ
Sbjct:  257 SRYVLVVEHDLAVLDYLSDYICCLYGMPSAYGVVTMPFSTREGINIFLAGYVPTENLRFREDALTFKVSQTADDLVKGDGSNALYNYPDMTKTMSTKTSDRKFILHVEAGAFTDSEIIVMLGENGTGKTTFIRMMAGLLKSDEQKAAEDAGDEAAAEAAGVPALNVSYKPQKISPKFQGTVRQLLHKRVREAYVHPQ 453
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BLAST of mRNA_H-canaliculatus_F_contig12647.2213.1 vs. uniprot
Match: A0A7R9Y8J7_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y8J7_9STRA)

HSP 1 Score: 295 bits (755), Expect = 1.100e-93
Identity = 144/201 (71.64%), Postives = 167/201 (83.08%), Query Frame = 1 
Query:    7 RYVLVVEHDLAVLDYLSDFICCLYGTPSAYGVVTMPFSVREGINIFLAGFVPTENLRFRDVTLDFKMTMTAEEVLANGNTNLIYTYPSMTKTMRSK------TGKQFKLHVEEGQFADSEILVLLGENGTGKTTFIRMLAGLLKSDEQMEAEASGDQDLADSLGVPNLNVSYKPQKISPRFEGTVRQLLHKRIRDAYIHPQ 591
            +YVLVVEHDLAVLDYLSDFICCLYGTP AYGVVTMPF+VREGIN+FLAGFVPTENLRFR+  L FK++  A E     N + +Y+YP+MTKTMRSK       G+ F LHVE G F DSEI+V+LGENGTGKTTFIRM+AGLLKSDEQ +AEA GD+D A + GVP ++VSYKPQKI+P+F GTVR LLHK+IRDAY+HPQ
Sbjct:  290 KYVLVVEHDLAVLDYLSDFICCLYGTPGAYGVVTMPFAVREGINVFLAGFVPTENLRFREEALQFKVSQFAAEGGELNNDSAMYSYPTMTKTMRSKKKSGSGAGRVFTLHVEGGSFGDSEIIVMLGENGTGKTTFIRMMAGLLKSDEQSQAEAEGDEDRAAAFGVPRMSVSYKPQKIAPKFNGTVRNLLHKKIRDAYVHPQ 490
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BLAST of mRNA_H-canaliculatus_F_contig12647.2213.1 vs. uniprot
Match: A0A7S3M9H8_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M9H8_9STRA)

HSP 1 Score: 287 bits (734), Expect = 2.350e-93
Identity = 144/201 (71.64%), Postives = 164/201 (81.59%), Query Frame = 1 
Query:    4 KRYVLVVEHDLAVLDYLSDFICCLYGTPSAYGVVTMPFSVREGINIFLAGFVPTENLRFRDVTLDFKMTMTAEEVLANGNTNLIYTYPSMTKTMRSKTG-----KQFKLHVEEGQFADSEILVLLGENGTGKTTFIRMLAGLLKSDEQMEAEASGDQDLADSLGVPNLNVSYKPQKISPRFEGTVRQLLHKRIRDAYIHPQ 591
            +++VL VEHDLA+LDYLSD+ICCLYGTPSAYGVVTMPFSVREGINIFLAGFVPTENLRFRD  L+FK+  T+ E+  N     +Y+YP+MTKTMR         + F LHV +GQF DSEI+V+LGENGTGKTTFIRMLAGLLKSDEQ EAEA  D + A    VP LNVSYKPQKISP+F+GTVR LLHK+IRDAYIHPQ
Sbjct:   54 QKFVLAVEHDLAILDYLSDYICCLYGTPSAYGVVTMPFSVREGINIFLAGFVPTENLRFRDEELNFKLA-TSTELFENPGKTSMYSYPAMTKTMRGAEVPGTPIQTFILHVNKGQFTDSEIVVMLGENGTGKTTFIRMLAGLLKSDEQTEAEAEEDYETAHRFSVPQLNVSYKPQKISPKFQGTVRMLLHKKIRDAYIHPQ 253
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BLAST of mRNA_H-canaliculatus_F_contig12647.2213.1 vs. uniprot
Match: A0A7S1U5G3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U5G3_9STRA)

HSP 1 Score: 294 bits (752), Expect = 8.730e-93
Identity = 147/204 (72.06%), Postives = 171/204 (83.82%), Query Frame = 1 
Query:    1 AKRYVLVVEHDLAVLDYLSDFICCLYGTPSAYGVVTMPFSVREGINIFLAGFVPTENLRFRDVTLDFKMTM-TAEEVLANGNTNLIYTYPSMTKTMRSKT------GKQFKLHVEEGQFADSEILVLLGENGTGKTTFIRMLAGLLKSDEQMEAEASGDQDLADSLGVPNLNVSYKPQKISPRFEGTVRQLLHKRIRDAYIHPQ 591
            A+++VLVVEHDLAVLDYLSDFICCLYGTPSAYGVVTMPF+VREGIN+FLAGFVPTENLRFR+  L FK++   AE      N + IY YP+MTKTMRSK        + F LHV+EG F DSEI+V+LGENGTGKTTFIRM+AGLLKSDEQ +AEA GD++LA SLGVP ++VSYKPQKI+P+F GTVR LLHK+IRDAY+HPQ
Sbjct:  333 AEKFVLVVEHDLAVLDYLSDFICCLYGTPSAYGVVTMPFAVREGINVFLAGFVPTENLRFREEALQFKVSQFAAEGGNLCDNESAIYQYPNMTKTMRSKKKNAKNRDRVFTLHVQEGAFNDSEIIVMLGENGTGKTTFIRMMAGLLKSDEQAKAEADGDEELAASLGVPRMSVSYKPQKIAPKFNGTVRNLLHKKIRDAYVHPQ 536
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BLAST of mRNA_H-canaliculatus_F_contig12647.2213.1 vs. uniprot
Match: A0A7S2R7J1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R7J1_9STRA)

HSP 1 Score: 292 bits (747), Expect = 1.350e-92
Identity = 143/196 (72.96%), Postives = 163/196 (83.16%), Query Frame = 1 
Query:    4 KRYVLVVEHDLAVLDYLSDFICCLYGTPSAYGVVTMPFSVREGINIFLAGFVPTENLRFRDVTLDFKMTMTAEEVLANGNTNLIYTYPSMTKTMRSKTGKQFKLHVEEGQFADSEILVLLGENGTGKTTFIRMLAGLLKSDEQMEAEASGDQDLADSLGVPNLNVSYKPQKISPRFEGTVRQLLHKRIRDAYIHPQ 591
              +V+VVEHDLAVLDYLSDFICCLYG PSAYGVVTMPFSVREGINIFLAGFVPTENLRFRD  L FK++  A+  +  G+    Y YP MTKTM SK G QF LHV  G F DSEI+VLLGENGTGKTTFIRMLAGLLKSDE ++AE  GD + A++  VP+L++SYKPQKISP+FEGTVRQL+HK+IRDAY+HPQ
Sbjct:  284 SSFVMVVEHDLAVLDYLSDFICCLYGQPSAYGVVTMPFSVREGINIFLAGFVPTENLRFRDDALTFKVSQNADAGMGGGDRMAQYNYPDMTKTMSSK-GSQFILHVTAGSFTDSEIIVLLGENGTGKTTFIRMLAGLLKSDELVQAEKDGDTEAAEAASVPSLHISYKPQKISPKFEGTVRQLMHKKIRDAYVHPQ 478
[Close]
BLAST of mRNA_H-canaliculatus_F_contig12647.2213.1 vs. uniprot
Match: A0A7S2FAX2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FAX2_9STRA)

HSP 1 Score: 286 bits (733), Expect = 6.600e-91
Identity = 144/198 (72.73%), Postives = 165/198 (83.33%), Query Frame = 1 
Query:    1 AKRYVLVVEHDLAVLDYLSDFICCLYGTPSAYGVVTMPFSVREGINIFLAGFVPTENLRFRDVTLDFKMTMTAEEVLANGNTNLI-YTYPSMTKTMRSKTGKQFKLHVEEGQFADSEILVLLGENGTGKTTFIRMLAGLLKSDEQMEAEASGDQDLADSLGVPNLNVSYKPQKISPRFEGTVRQLLHKRIRDAYIHPQ 591
            ++ +VLVVEHDLAVLDYLSD+ICCLYGTPSAYGVVTMPFSVREGIN+FLAGFVPTENLRFR+  L FK++ TAE+    G   +  Y YPSMTKT++ K   QFKLHVE G F DSEI+VLLGENGTGKTTFIRMLAGLLKSDE ++AE   D D  + + VP LN+S KPQKISP+F+GTVRQLLHKRIRDAY+HPQ
Sbjct:  247 SRSFVLVVEHDLAVLDYLSDYICCLYGTPSAYGVVTMPFSVREGINVFLAGFVPTENLRFREDALTFKVSQTAEDT--GGIDRMAQYNYPSMTKTLKQKDS-QFKLHVEGGSFTDSEIIVLLGENGTGKTTFIRMLAGLLKSDEVIQAEKDEDYDELERVAVPQLNISMKPQKISPKFQGTVRQLLHKRIRDAYVHPQ 441
[Close]
BLAST of mRNA_H-canaliculatus_F_contig12647.2213.1 vs. uniprot
Match: A0A812T7S6_SYMMI (ABCE2 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812T7S6_SYMMI)

HSP 1 Score: 278 bits (711), Expect = 1.550e-88
Identity = 144/201 (71.64%), Postives = 168/201 (83.58%), Query Frame = 1 
Query:    7 RYVLVVEHDLAVLDYLSDFICCLYGTPSAYGVVTMPFSVREGINIFLAGFVPTENLRFRDVTLDFKMTMTAEEVLANGNTNLIYTYPSMTKTMRSKTGKQFKLHVEE------GQFADSEILVLLGENGTGKTTFIRMLAGLLKSDEQMEAEASGDQDLADSLGVPNLNVSYKPQKISPRFEGTVRQLLHKRIRDAYIHPQ 591
            ++VLVVEHDLAVLDYLSD+ICCLYGTPSAYGVVTMPFSVREGINIFLAGFVPTENLRFRD  L+FK+++     L   +++ I+ YP+MTKTMR +  +QF LHVE       G F +SEI+V+LGENGTGKTTFIRMLAGLLKSDEQ   EA+G+  LA   GVP+LNVSYKPQKISP+F+GTVRQLLHK+IRDAY+HPQ
Sbjct:  173 KFVLVVEHDLAVLDYLSDYICCLYGTPSAYGVVTMPFSVREGINIFLAGFVPTENLRFRDEELNFKLSL-----LDLDHSSTIH-YPAMTKTMR-QADQQFILHVEAVRLTRFGAFTNSEIIVMLGENGTGKTTFIRMLAGLLKSDEQAAHEAAGEMQLAHDCGVPSLNVSYKPQKISPKFQGTVRQLLHKKIRDAYVHPQ 366
[Close]
BLAST of mRNA_H-canaliculatus_F_contig12647.2213.1 vs. uniprot
Match: B8LE79_THAPS (ABC-transporter family protein n=2 Tax=Thalassiosira TaxID=35127 RepID=B8LE79_THAPS)

HSP 1 Score: 278 bits (711), Expect = 2.990e-88
Identity = 140/198 (70.71%), Postives = 160/198 (80.81%), Query Frame = 1 
Query:    4 KRYVLVVEHDLAVLDYLSDFICCLYGTPSAYGVVTMPFSVREGINIFLAGFVPTENLRFRDVTLDFKMTMTAEEVLANGNTNLI--YTYPSMTKTMRSKTGKQFKLHVEEGQFADSEILVLLGENGTGKTTFIRMLAGLLKSDEQMEAEASGDQDLADSLGVPNLNVSYKPQKISPRFEGTVRQLLHKRIRDAYIHPQ 591
            +RYVLVVEHDLAVLDYLSDF+C LYG+P  YGVVTMPF VR GIN FL+GF+PTENLRFRD +L FK++  AE     G  +++  Y+YPSMTKT    T K F LHV+EGQF DSEI+VLLGENGTGKTTF+RMLAGLLKSDEQ   E  G  D A + G P+LNVSYKPQKISP+F+GTVRQLLHKRIRD+YIHPQ
Sbjct:  179 RRYVLVVEHDLAVLDYLSDFVCVLYGSPGGYGVVTMPFGVRVGINAFLSGFIPTENLRFRDDSLTFKISERAEAGGELGKNDIMRSYSYPSMTKTQTKGTAK-FILHVDEGQFTDSEIIVLLGENGTGKTTFVRMLAGLLKSDEQTRLEEEGKMDEAANAGAPDLNVSYKPQKISPKFQGTVRQLLHKRIRDSYIHPQ 375
[Close]
BLAST of mRNA_H-canaliculatus_F_contig12647.2213.1 vs. uniprot
Match: A0A7S1GHN5_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GHN5_CYCTE)

HSP 1 Score: 271 bits (692), Expect = 1.240e-86
Identity = 137/196 (69.90%), Postives = 157/196 (80.10%), Query Frame = 1 
Query:    4 KRYVLVVEHDLAVLDYLSDFICCLYGTPSAYGVVTMPFSVREGINIFLAGFVPTENLRFRDVTLDFKMTMTAEEVLANGNTNLIYTYPSMTKTMRSKTGKQFKLHVEEGQFADSEILVLLGENGTGKTTFIRMLAGLLKSDEQMEAEASGDQDLADSLGVPNLNVSYKPQKISPRFEGTVRQLLHKRIRDAYIHPQ 591
            +RYVLVVEHDLAVLDYLSD +C LYG P AYGVVTMPF VR GIN FLAGFV TENLRFRD  L FK++  A++  +  +    Y+YP+MTKT ++K   +F LHVEEG F DSEILVLLGENGTGKTTF+RMLAGLLKSDEQ++ E  G    A   G P+LNVSYKPQKISP+F+GTVRQLLHKR+RDAYIHPQ
Sbjct:   77 RRYVLVVEHDLAVLDYLSDSVCILYGAPGAYGVVTMPFGVRTGINAFLAGFVATENLRFRDDALSFKVSERADDKGSKNDIMKQYSYPTMTKT-QTKGASRFILHVEEGAFTDSEILVLLGENGTGKTTFVRMLAGLLKSDEQVKLEEEGMMYEAAQAGAPDLNVSYKPQKISPKFKGTVRQLLHKRVRDAYIHPQ 271
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12647.2213.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KJR1_9PHAE6.820e-12997.46ABC protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0... [more]
A0A7S2UWB9_9STRA1.960e-9572.59Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7R9Y8J7_9STRA1.100e-9371.64Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S3M9H8_9STRA2.350e-9371.64Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S1U5G3_9STRA8.730e-9372.06Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S2R7J1_9STRA1.350e-9272.96Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2FAX2_9STRA6.600e-9172.73Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A812T7S6_SYMMI1.550e-8871.64ABCE2 protein n=1 Tax=Symbiodinium microadriaticum... [more]
B8LE79_THAPS2.990e-8870.71ABC-transporter family protein n=2 Tax=Thalassiosi... [more]
A0A7S1GHN5_CYCTE1.240e-8669.90Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12647contigH-canaliculatus_F_contig12647:557..3432 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score390.2
Seed ortholog evalue5.7e-106
Seed eggNOG ortholog2880.D8LC25
Preferred nameABCE1
KEGG koko:K06174
GOsGO:0000054,GO:0000166,GO:0000956,GO:0001558,GO:0001959,GO:0002181,GO:0002183,GO:0002682,GO:0003674,GO:0003824,GO:0004857,GO:0005488,GO:0005506,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005759,GO:0005829,GO:0006139,GO:0006401,GO:0006402,GO:0006403,GO:0006405,GO:0006412,GO:0006413,GO:0006415,GO:0006417,GO:0006518,GO:0006611,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0006996,GO:0008104,GO:0008144,GO:0008150,GO:0008152,GO:0008428,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009966,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0010646,GO:0010941,GO:0015031,GO:0015833,GO:0015931,GO:0016043,GO:0016070,GO:0016071,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019219,GO:0019222,GO:0019439,GO:0019538,GO:0022411,GO:0022613,GO:0023051,GO:0030234,GO:0030554,GO:0030684,GO:0030687,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031328,GO:0031347,GO:0031369,GO:0031503,GO:0031974,GO:0032069,GO:0032074,GO:0032268,GO:0032270,GO:0032553,GO:0032555,GO:0032559,GO:0032790,GO:0032984,GO:0032988,GO:0032991,GO:0033036,GO:0033750,GO:0034248,GO:0034250,GO:0034613,GO:0034641,GO:0034645,GO:0034655,GO:0035639,GO:0036094,GO:0040008,GO:0042254,GO:0042273,GO:0042886,GO:0042981,GO:0043021,GO:0043022,GO:0043024,GO:0043043,GO:0043066,GO:0043067,GO:0043069,GO:0043086,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043523,GO:0043524,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0044877,GO:0045088,GO:0045184,GO:0045727,GO:0045934,GO:0046483,GO:0046700,GO:0046872,GO:0046907,GO:0046914,GO:0048037,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0050657,GO:0050658,GO:0050776,GO:0050789,GO:0050790,GO:0050794,GO:0051128,GO:0051168,GO:0051169,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051234,GO:0051236,GO:0051246,GO:0051247,GO:0051252,GO:0051253,GO:0051336,GO:0051346,GO:0051536,GO:0051540,GO:0051640,GO:0051641,GO:0051649,GO:0051656,GO:0060255,GO:0060338,GO:0060548,GO:0060698,GO:0060699,GO:0060700,GO:0060701,GO:0060702,GO:0060759,GO:0065007,GO:0065009,GO:0070013,GO:0070481,GO:0070727,GO:0071166,GO:0071426,GO:0071428,GO:0071702,GO:0071704,GO:0071705,GO:0071826,GO:0071840,GO:0080090,GO:0080134,GO:0090304,GO:0097159,GO:0097367,GO:0098772,GO:1901214,GO:1901215,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1903008,GO:1990904,GO:2000112
EggNOG free text desc.4Fe-4S binding domain
EggNOG OGsCOG1245@1,KOG0063@2759
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03009
Hectar predicted targeting categoryother localisation
Exons4
Model size591
Cds size591
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12647.2213.1prot_H-canaliculatus_F_contig12647.2213.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig12647 557..3432 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928984.8824859-CDS-H-canaliculatus_F_contig12647:556..6731622928984.8824859-CDS-H-canaliculatus_F_contig12647:556..673Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12647 557..673 -
1696845638.659034-CDS-H-canaliculatus_F_contig12647:556..6731696845638.659034-CDS-H-canaliculatus_F_contig12647:556..673Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12647 557..673 -
1622928984.895229-CDS-H-canaliculatus_F_contig12647:1203..13131622928984.895229-CDS-H-canaliculatus_F_contig12647:1203..1313Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12647 1204..1313 -
1696845638.6784356-CDS-H-canaliculatus_F_contig12647:1203..13131696845638.6784356-CDS-H-canaliculatus_F_contig12647:1203..1313Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12647 1204..1313 -
1622928984.907898-CDS-H-canaliculatus_F_contig12647:2116..22761622928984.907898-CDS-H-canaliculatus_F_contig12647:2116..2276Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12647 2117..2276 -
1696845638.6894088-CDS-H-canaliculatus_F_contig12647:2116..22761696845638.6894088-CDS-H-canaliculatus_F_contig12647:2116..2276Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12647 2117..2276 -
1622928984.920999-CDS-H-canaliculatus_F_contig12647:3228..34321622928984.920999-CDS-H-canaliculatus_F_contig12647:3228..3432Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12647 3229..3432 -
1696845638.7044687-CDS-H-canaliculatus_F_contig12647:3228..34321696845638.7044687-CDS-H-canaliculatus_F_contig12647:3228..3432Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12647 3229..3432 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig12647.2213.1

>prot_H-canaliculatus_F_contig12647.2213.1 ID=prot_H-canaliculatus_F_contig12647.2213.1|Name=mRNA_H-canaliculatus_F_contig12647.2213.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=197bp
AKRYVLVVEHDLAVLDYLSDFICCLYGTPSAYGVVTMPFSVREGINIFLA
GFVPTENLRFRDVTLDFKMTMTAEEVLANGNTNLIYTYPSMTKTMRSKTG
KQFKLHVEEGQFADSEILVLLGENGTGKTTFIRMLAGLLKSDEQMEAEAS
GDQDLADSLGVPNLNVSYKPQKISPRFEGTVRQLLHKRIRDAYIHPQ
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mRNA from alignment at H-canaliculatus_F_contig12647:557..3432-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig12647.2213.1 ID=mRNA_H-canaliculatus_F_contig12647.2213.1|Name=mRNA_H-canaliculatus_F_contig12647.2213.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2876bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12647:557..3432- (Hapterophycus canaliculatus Oshoro5f female)
GCGAAGCGGTACGTCCTGGTGGTGGAGCACGATCTCGCGGTCCTCGACTA
CCTGTCGGACTTCATCTGCTGCCTCTACGGAACCCCCTCGGCATACGGCG
TGGTGACCATGCCCTTCAGCGTCCGCGAGGGTATCAACATCTTCCTGGCC
GGCTTCGTGCCCACGGAGAATCTCCGTTTCCGCGACGTAACGCTGGACTT
CAAGGTGTGCGTGGATGGAGGGATGCCTGTCTGCCTGTCTGTCTGTCTGT
TTGTCTGTCTCTTTTTTTTGTTATGTTGATTTTTGGTTCCTTGTCTGGAT
GCGTGTGTGTTTGATTATGCACGGGCGTCGATCGCGCTAGGGCGGGCGAC
CCCAGCAAATGGCGGAGGGCGAAATCGAGACCGGTGCGTTGCTGTCTCAC
GTCTTGTGTGTGGGAGTGTTCGGTTTCGTGTTTAGGGATGTGACAGATCG
AAAAAATAGAGTGCTGTCGTCGCAACAGCTCATCAGTAGGGTAAATCTAA
CCTGTTTCACGACGGTCCAAACCCAGCTCACGTTCCCTATTAGTGGGTGA
ACAATCCTACACTTGGTGACTGCGGCGACAAAATGATAAGAAGAGTCGAC
ATCGAAGAATAAAAAAGCAACGTCGCTATGAACACTTGGCTGCCACAAGC
CAATCTTAAACCTTGGTGGCAACGAAGACGAACGAGATTGACACAAACGT
GGCCCAGAGGAGATGTCTCTGGTGTTGTTGACTCTCTTTCTTGAGAAAGA
ACGATGACTCAACGGCGGGGTCCCTGGAGGGCGGGGGCGCGGAAGATGCT
GTCTGGCGAGTTCAGCTTCATGCTTGTCTTAAGAATCTTTGTACTGAGCC
GTGTAAAATCGTGTGCGGCGATTAAAGAGAAAGTCACTATTTTTCAACAC
GTGGCCCGGTCGGTCGTACGGTCGGATATTTACTTCTCGCGCCCCTTTTT
CCCCTCTCTTGTCCACCCCGGCCCGCCACGTAATGTGGGCAGGATCGCAC
AGTTGGCGGCCAGACGACACAGACGAGCAAGAAATCAGTACTTCCCTCGC
CCCCCGCCCACGTTCCACCCGCCCTCTTGTTATGACTCGCCGCCTCTCTC
TCCCATCCCTCCTCCCCCTTCTCCCCCTCCGCCTCCGCTGGCGTGGGCAA
CCCCAGATGACGATGACGGCGGAAGAGGTCCTCGCCAACGGCAACACCAA
CCTCATCTACACCTACCCTAGCATGACCAAGACCATGCGCTCCAAGACCG
GCAAACAGTTCAAGCTGCACGTGGAGGAAGGGCAGTTCGCCGACTCGGAG
ATCCTGGTTTTGCTCGGTGCGTGAGGAATAATTGGCGCCGGTTCGATTAT
CTTATCTCTCTCTCTCTCTCTCCCTCTCCCTCTTTTCGCCACGAGATCTT
CGGCCGCTGGCTGCGCTGTAGTGCCATATTTTAGAGAAGCACTAACAGCG
CCGTAGGAGCACCTTGTGGGGTACGTTCTGCGAGGCGTATCTTGAGGCTT
CTGTCGAGTCCCAAACAATTAGGGTTCATCGTGTAGGCTTCGGACAAAAA
CATGAACAGAAAACAGCTGTGAAAATCAGCATGTGCATATTTTGTCGGTT
TGTTGGCTAGGGTGTACCGACTTGATCCTTTGGACCGAGTGTGCCCCTTC
GGTAGCTGCGTGTCAGAAACATCCTCTTGGGGCCAATCCAAGATCTGCCT
CTTTCGTCTCGTCGGCATCCAAGGAACCCGCCTCTGAAAGCCCACAAATT
TTGGTCGGTCGTTGCGCTTCATTCTCTCCTTGATGAATCTGAATCCCTTG
CCGGTGCGAGCACACGACTTGGATGACGTCATACTTGGCGGGCGCGTGAG
GATCCGGCCGTATCCTCAACGCGACTCTCTTCCACGTGAACTGCGTCGTG
TCGGATCTCTGCCAAGGAGAATCCCACCTGTGATGCTCCGTGCGTGTAGA
GCACCTGGTGGGCGTACGCGTCGGGAGGTCTCAAAACGCTTTTTTATTGA
ACGTGAACGTCGGCAATGGCAACAATAACCCCCACAAACAGCAGCAGCAG
CAGCAGCAGCAGCAGCAGCAACAACAAGAACAACAACTAAATGTAAACGA
CACATGGACCATGCCGCAGGTGAAAACGGTACCGGTAAGACGACGTTCAT
CCGCATGCTGGCGGGGCTGTTGAAGAGCGACGAACAGATGGAAGCTGAGG
CTTCCGGGGACCAAGATCTCGCCGATTCGGTAAGTTTCAATAAGCTTTGA
TATTTGTGGATACCTTTTCAGGGTGTCTCGTGGCTTCCCTATGGGTGATG
GGTCTCGCCTATGGGATAGAGGCGTGCTTGGAACTGCCAATCGATTGGAG
ACGGTCGGCGGTCTAGATCACGGCCTGGCTGTCTTTGTGTAAGTGCTCGC
TCGCGGGGGTATGCAAAGTTGCGAGATTCGGCCGAGTGAGATGTTCCAGG
AGCATAATTTCGCCGCTTGCGGTGCTACACGGGGGGTGCTGGTGCGGCGC
ACAGGTCGAAGCGTAGCTGTAAGGTGCAAGCATTGCATCTCCTATGTCCT
TGTCGAGCCGCTGACCATGAGCGATGCATCGAGTGGCTCACAATCAACTC
GTACACACCATCACGCCCGTCCCTGCGCTTATCGTGGCTCATCCTGGAAA
ACACGGCTCATCGTTCCTTGGTACGTGTACCTTCTCCCGCCGTGCCGTTT
CGTTTTGTGGCGTTTTTGTCCCTGTCTTATGGGGGGGGGGGCGACGGCGT
ATCGGACAGCTGGGCGTGCCGAACCTAAACGTGTCGTACAAGCCGCAGAA
GATCAGCCCGCGCTTCGAGGGGACCGTGAGGCAGCTCCTGCACAAGCGTA
TCCGAGACGCTTACATCCACCCACAG
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig12647:557..3432-

>mRNA_H-canaliculatus_F_contig12647.2213.1 ID=mRNA_H-canaliculatus_F_contig12647.2213.1|Name=mRNA_H-canaliculatus_F_contig12647.2213.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1182bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12647:557..3432- (Hapterophycus canaliculatus Oshoro5f female)
GCGAAGCGGTACGTCCTGGTGGTGGAGCACGATCTCGCGGTCCTCGACTA
CCTGTCGGACTTCATCTGCTGCCTCTACGGAACCCCCTCGGCATACGGCG
TGGTGACCATGCCCTTCAGCGTCCGCGAGGGTATCAACATCTTCCTGGCC
GGCTTCGTGCCCACGGAGAATCTCCGTTTCCGCGACGTAACGCTGGACTT
CAAGGCGAAGCGGTACGTCCTGGTGGTGGAGCACGATCTCGCGGTCCTCG
ACTACCTGTCGGACTTCATCTGCTGCCTCTACGGAACCCCCTCGGCATAC
GGCGTGGTGACCATGCCCTTCAGCGTCCGCGAGGGTATCAACATCTTCCT
GGCCGGCTTCGTGCCCACGGAGAATCTCCGTTTCCGCGACGTAACGCTGG
ACTTCAAGATGACGATGACGGCGGAAGAGGTCCTCGCCAACGGCAACACC
AACCTCATCTACACCTACCCTAGCATGACCAAGACCATGCGCTCCAAGAC
CGGCAAACAGTTCAAGCTGCACGTGGAGGAAGGGCAGTTCGCCGACTCGG
AGATCCTGGTTTTGCTCGATGACGATGACGGCGGAAGAGGTCCTCGCCAA
CGGCAACACCAACCTCATCTACACCTACCCTAGCATGACCAAGACCATGC
GCTCCAAGACCGGCAAACAGTTCAAGCTGCACGTGGAGGAAGGGCAGTTC
GCCGACTCGGAGATCCTGGTTTTGCTCGGTGAAAACGGTACCGGTAAGAC
GACGTTCATCCGCATGCTGGCGGGGCTGTTGAAGAGCGACGAACAGATGG
AAGCTGAGGCTTCCGGGGACCAAGATCTCGCCGATTCGGTGAAAACGGTA
CCGGTAAGACGACGTTCATCCGCATGCTGGCGGGGCTGTTGAAGAGCGAC
GAACAGATGGAAGCTGAGGCTTCCGGGGACCAAGATCTCGCCGATTCGCT
GGGCGTGCCGAACCTAAACGTGTCGTACAAGCCGCAGAAGATCAGCCCGC
GCTTCGAGGGGACCGTGAGGCAGCTCCTGCACAAGCGTATCCGAGACGCT
TACATCCACCCACAGCTGGGCGTGCCGAACCTAAACGTGTCGTACAAGCC
GCAGAAGATCAGCCCGCGCTTCGAGGGGACCGTGAGGCAGCTCCTGCACA
AGCGTATCCGAGACGCTTACATCCACCCACAG
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