prot_H-canaliculatus_F_contig1263.2202.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-canaliculatus_F_contig1263.2202.1
Unique Name	prot_H-canaliculatus_F_contig1263.2202.1
Type	polypeptide
Organism	Hapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length	93

Homology

[Close]

BLAST of mRNA_H-canaliculatus_F_contig1263.2202.1 vs. uniprot
Match: D7FMF7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMF7_ECTSI)

HSP 1 Score: 172 bits (436), Expect = 3.090e-48
Identity = 87/90 (96.67%), Postives = 88/90 (97.78%), Query Frame = 0

Query:    2 LTGREHYERELKQQAFLMLGSLEAFGNPVGLLRGMGQGMQDFVKEPVLGLLKSVEDLAPEELMHGMARGAGSLLNHSVGGVAKSVSLITG 91
            LT REHYERELKQQAFLMLGSLEAFGNPVGL+RGMGQGMQDFVKEPVLGLLKSVEDLAPEELMHGMARGAGSLLNHSVGGVA SVSLITG
Sbjct:  352 LTAREHYERELKQQAFLMLGSLEAFGNPVGLVRGMGQGMQDFVKEPVLGLLKSVEDLAPEELMHGMARGAGSLLNHSVGGVANSVSLITG 441

[Close]

BLAST of mRNA_H-canaliculatus_F_contig1263.2202.1 vs. uniprot
Match: A0A6H5KXT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXT8_9PHAE)

HSP 1 Score: 172 bits (436), Expect = 6.440e-48
Identity = 87/90 (96.67%), Postives = 88/90 (97.78%), Query Frame = 0

Query:    2 LTGREHYERELKQQAFLMLGSLEAFGNPVGLLRGMGQGMQDFVKEPVLGLLKSVEDLAPEELMHGMARGAGSLLNHSVGGVAKSVSLITG 91
            LT REHYERELKQQAFLMLGSLEAFGNPVGL+RGMGQGMQDFVKEPVLGLLKSVEDLAPEELMHGMARGAGSLLNHSVGGVA SVSLITG
Sbjct:  705 LTAREHYERELKQQAFLMLGSLEAFGNPVGLVRGMGQGMQDFVKEPVLGLLKSVEDLAPEELMHGMARGAGSLLNHSVGGVANSVSLITG 794

[Close]

BLAST of mRNA_H-canaliculatus_F_contig1263.2202.1 vs. uniprot
Match: A0A836C849_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C849_9STRA)

HSP 1 Score: 115 bits (289), Expect = 4.480e-28
Identity = 55/87 (63.22%), Postives = 68/87 (78.16%), Query Frame = 0

Query:    7 HYERELKQQAFLMLGSLEAFGNPVGLLRGMGQGMQDFVKEPVLGLLKSVEDLAPEELMHGMARGAGSLLNHSVGGVAKSVSLITGRL 93
            HY   +KQ   LMLG+LEAFGNPVGL RG+ QG+QDF+ EPVLGL++SVE+L PEE   G+ARG GSLL H+VGG+A S S+I G +
Sbjct: 5355 HYLSTVKQHVLLMLGALEAFGNPVGLFRGVSQGVQDFISEPVLGLVRSVEELRPEEFFAGIARGGGSLLKHTVGGMANSASMIAGTI 5441

[Close]

BLAST of mRNA_H-canaliculatus_F_contig1263.2202.1 vs. uniprot
Match: A0A7R9WT54_9STRA (Hypothetical protein (Fragment) n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WT54_9STRA)

HSP 1 Score: 100 bits (249), Expect = 2.010e-25
Identity = 50/84 (59.52%), Postives = 61/84 (72.62%), Query Frame = 0

Query:    7 HYERELKQQAFLMLGSLEAFGNPVGLLRGMGQGMQDFVKEPVLGLLKSVEDLAPEELMHGMARGAGSLLNHSVGGVAKSVSLIT 90
            HY   L+Q    +LGSL AFGNP+GL+RG+G+GM DFV EPV GL KSV++L P  L  G+ARG GSL  H+VGG A S SL+T
Sbjct:   27 HYMASLRQNVPALLGSLAAFGNPLGLIRGVGEGMADFVSEPVKGLQKSVQELDPGYLFDGVARGTGSLARHTVGGFADSASLLT 110

[Close]

BLAST of mRNA_H-canaliculatus_F_contig1263.2202.1 vs. uniprot
Match: A0A7S2LN01_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LN01_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 3.280e-21
Identity = 46/84 (54.76%), Postives = 61/84 (72.62%), Query Frame = 0

Query:    7 HYERELKQQAFLMLGSLEAFGNPVGLLRGMGQGMQDFVKEPVLGLLKSVEDLAPEELMHGMARGAGSLLNHSVGGVAKSVSLIT 90
            HY   L+     +LGSL AFGNP+GL+RG+G G+ DFV EP+ GL KS+E+L P  ++ G+ARG GSL  H++GGVA S SL+T
Sbjct:  317 HYLAALRSNVPSLLGSLAAFGNPLGLIRGLGDGVSDFVSEPIKGLKKSLEELDPTFVIDGVARGTGSLARHTIGGVADSASLLT 400

[Close]

BLAST of mRNA_H-canaliculatus_F_contig1263.2202.1 vs. uniprot
Match: A0A7S2PQX2_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PQX2_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 3.340e-21
Identity = 46/84 (54.76%), Postives = 61/84 (72.62%), Query Frame = 0

Query:    7 HYERELKQQAFLMLGSLEAFGNPVGLLRGMGQGMQDFVKEPVLGLLKSVEDLAPEELMHGMARGAGSLLNHSVGGVAKSVSLIT 90
            HY   L+     +LGSL AFGNP+GL+RG+G G+ DFV EP+ GL KS+E+L P  ++ G+ARG GSL  H++GGVA S SL+T
Sbjct:  528 HYLAALRSNVPSLLGSLAAFGNPLGLIRGLGDGVSDFVSEPIKGLKKSLEELDPTFVIDGVARGTGSLARHTIGGVADSASLLT 611

[Close]

BLAST of mRNA_H-canaliculatus_F_contig1263.2202.1 vs. uniprot
Match: A0A7R9ZE76_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZE76_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 5.120e-20
Identity = 46/84 (54.76%), Postives = 59/84 (70.24%), Query Frame = 0

Query:    7 HYERELKQQAFLMLGSLEAFGNPVGLLRGMGQGMQDFVKEPVLGLLKSVEDLAPEELMHGMARGAGSLLNHSVGGVAKSVSLIT 90
            HY   L+     +LGSL  FGNPVGL+RG+G G+ DFV EP+ GL +SVE+L P  +M G+ARG GSL  H+V G+A S SL+T
Sbjct:  208 HYLTLLRNNIPALLGSLAFFGNPVGLIRGLGDGVSDFVNEPMKGLKRSVEELNPTFVMDGVARGTGSLARHTVSGIADSASLLT 291

[Close]

BLAST of mRNA_H-canaliculatus_F_contig1263.2202.1 vs. uniprot
Match: A0A7S2U5Y0_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U5Y0_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 2.210e-19
Identity = 44/84 (52.38%), Postives = 59/84 (70.24%), Query Frame = 0

Query:    7 HYERELKQQAFLMLGSLEAFGNPVGLLRGMGQGMQDFVKEPVLGLLKSVEDLAPEELMHGMARGAGSLLNHSVGGVAKSVSLIT 90
            HY   L+     +LGSL AFGNP+GL+RG+G G+ DFV EPV GL +SV++L P  ++ G+ARG  SL  H++GG A S SL+T
Sbjct:  148 HYLDSLRSNVPALLGSLAAFGNPIGLIRGLGDGVSDFVSEPVKGLKRSVKELDPSFVVDGVARGTESLARHTLGGFADSASLLT 231

[Close]

BLAST of mRNA_H-canaliculatus_F_contig1263.2202.1 vs. uniprot
Match: A0A7S0CCM6_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CCM6_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 1.220e-18
Identity = 44/84 (52.38%), Postives = 56/84 (66.67%), Query Frame = 0

Query:    7 HYERELKQQAFLMLGSLEAFGNPVGLLRGMGQGMQDFVKEPVLGLLKSVEDLAPEELMHGMARGAGSLLNHSVGGVAKSVSLIT 90
            HY    +     + GSL AFGNPVGL+RG+G G+ DFV EP+ GL KSV +L P   + G+ARG GSL  H+VG +A S SL+T
Sbjct:  412 HYLAAFRGNLPALFGSLSAFGNPVGLIRGLGDGVSDFVSEPIKGLKKSVAELDPIFALDGVARGTGSLARHTVGSIAGSASLLT 495

[Close]

BLAST of mRNA_H-canaliculatus_F_contig1263.2202.1 vs. uniprot
Match: A0A7R9UE31_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UE31_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 2.320e-18
Identity = 42/88 (47.73%), Postives = 57/88 (64.77%), Query Frame = 0

Query:    6 EHYERELKQQAFLMLGSLEAFGNPVGLLRGMGQGMQDFVKEPVLGLLKSVEDLAPEELMHGMARGAGSLLNHSVGGVAKSVSLITGRL 93
            +HYERE ++    ++G+L   GNP+GL+R    G +DFV EP+LGL+ S+E   P  L+ G  RG  SLL +SVGGV  S SL+T  L
Sbjct:  773 QHYEREARRHVLELIGALHLLGNPIGLMRSFRDGAKDFVAEPMLGLMDSIEQAKPAALVKGFKRGTTSLLKNSVGGVVNSASLLTDML 860

The following BLAST results are available for this feature:

BLAST of mRNA_H-canaliculatus_F_contig1263.2202.1 vs. uniprot

BLAST of mRNA_H-canaliculatus_F_contig1263.2202.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FMF7_ECTSI	3.090e-48	96.67	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KXT8_9PHAE	6.440e-48	96.67	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A836C849_9STRA	4.480e-28	63.22	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A7R9WT54_9STRA	2.010e-25	59.52	Hypothetical protein (Fragment) n=1 Tax=Craspedost...	[more]
A0A7S2LN01_9STRA	3.280e-21	54.76	Hypothetical protein n=1 Tax=Leptocylindrus danicu...	[more]
A0A7S2PQX2_9STRA	3.340e-21	54.76	Hypothetical protein n=1 Tax=Leptocylindrus danicu...	[more]
A0A7R9ZE76_9STRA	5.120e-20	54.76	Hypothetical protein n=1 Tax=Pseudictyota dubia Ta...	[more]
A0A7S2U5Y0_9STRA	2.210e-19	52.38	Hypothetical protein n=1 Tax=Attheya septentrional...	[more]
A0A7S0CCM6_9STRA	1.220e-18	52.38	Hypothetical protein n=1 Tax=Proboscia inermis Tax...	[more]
A0A7R9UE31_9STRA	2.320e-18	47.73	Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR031645	Vacuolar protein sorting-associated protein 13, C-terminal	PFAM	PF16909	VPS13_C	coord: 6..92 e-value: 1.2E-27 score: 96.8
IPR026847	Vacuolar protein sorting-associated protein 13	PANTHER	PTHR16166	VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13	coord: 5..92
None	No IPR available	PANTHER	PTHR16166:SF93	VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 13D	coord: 5..92

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-canaliculatus_F_contig1263	contig	H-canaliculatus_F_contig1263:1225..1652 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female	2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90	2022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-canaliculatus_F_contig1263.2202.1	mRNA_H-canaliculatus_F_contig1263.2202.1	Hapterophycus canaliculatus Oshoro5f female	mRNA	H-canaliculatus_F_contig1263 1225..1676 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-canaliculatus_F_contig1263.2202.1 ID=prot_H-canaliculatus_F_contig1263.2202.1|Name=mRNA_H-canaliculatus_F_contig1263.2202.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=93bp
MLTGREHYERELKQQAFLMLGSLEAFGNPVGLLRGMGQGMQDFVKEPVLG
LLKSVEDLAPEELMHGMARGAGSLLNHSVGGVAKSVSLITGRL

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR026847	VPS13
IPR031645	VPS13_C