mRNA_H-canaliculatus_F_contig12604.2187.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig12604.2187.1 vs. uniprot
Match: D7FJ76_ECTSI (Ferric reductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ76_ECTSI) HSP 1 Score: 171 bits (434), Expect = 6.070e-43 Identity = 92/141 (65.25%), Postives = 110/141 (78.01%), Query Frame = 3
Query: 918 QVVSAAAAWTSVGFSSDGMMVGSDAVVGLPDDVSVQEYDLTGLSVDQVVVSDVQEVTGGSVSQDASGETTLTFTRPLSPEGDKQTISSTPGDTTILLYSFGTDNTLAYHGPAPSRGSVVLDLFCGDAG-----TFAGTPAP 1325
+VVS A AWTS+GFSSD MM+GSDAV+GLPD+ +V+EYDL + V+ S Q++TGGSVSQDASG TTL+FTRPL+P +KQ IS TPGD TI LY+FG DN L +HG AP+RGS+VLDLFCGD G T AGTPAP
Sbjct: 63 EVVSTAVAWTSLGFSSDLMMIGSDAVIGLPDESAVEEYDLISQTTAGVLPSATQDITGGSVSQDASG-TTLSFTRPLAP-ANKQAISGTPGDETIFLYAFGGDNELGFHGLAPNRGSLVLDLFCGDGGDGDGATVAGTPAP 201
BLAST of mRNA_H-canaliculatus_F_contig12604.2187.1 vs. uniprot
Match: A0A6H5JN46_9PHAE (DOMON domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN46_9PHAE) HSP 1 Score: 169 bits (427), Expect = 3.660e-42 Identity = 89/139 (64.03%), Postives = 110/139 (79.14%), Query Frame = 3
Query: 918 QVVSAAAAWTSVGFSSDGMMVGSDAVVGLPDDVSVQEYDLTGLSVDQVVVSDVQEVTGGSVSQDASGETTLTFTRPLSPEGDKQTISSTPGDTTILLYSFGTDNTLAYHGPAPSRGSVVLDLFCGDAG---TFAGTPAP 1325
+VVS A AWTS+GFSSD MVGSDAV+GLP++ +V+EYDLT ++ VV+S Q++TGGSVSQDASG TTL+FTRPL+P +KQ IS TPGD TI +Y+FG N LA+HG AP+RG + LDLFCG+ G T AGTPAP
Sbjct: 63 EVVSTAVAWTSLGFSSDLSMVGSDAVIGLPEESTVEEYDLTSHALAGVVLSSTQDITGGSVSQDASG-TTLSFTRPLAP-ANKQAISGTPGDETIFIYAFGEGNELAFHGQAPNRGDLTLDLFCGEGGDGATVAGTPAP 199
BLAST of mRNA_H-canaliculatus_F_contig12604.2187.1 vs. uniprot
Match: D7FYB8_ECTSI (Ferric reductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYB8_ECTSI) HSP 1 Score: 142 bits (357), Expect = 6.110e-34 Identity = 76/123 (61.79%), Postives = 92/123 (74.80%), Query Frame = 3
Query: 975 MVGSDAVVGLPDDVSVQEYDLTGLSVDQVVVSDVQEVTGGSVSQDASGETTLTFTRPLSPEGDKQTISSTPGDTTILLYSFGTDNTLAYHGPAPSRGSVVLDLFCGDAG------TFAGTPAP 1325
M+GSDAV+GLPD+ +V+EYDLT + +V S Q++TGG VSQDASG TTL+FTRPL+P +KQ IS TPGD TI L++FG DN L YHG P+RGS+VLDLFCGD G T GTPAP
Sbjct: 1 MIGSDAVIGLPDESTVEEYDLTSQTTARVFSSATQDITGGLVSQDASG-TTLSFTRPLAPT-NKQAISGTPGDETIFLFAFGADNELGYHGLPPNRGSLVLDLFCGDGGDGSDDVTVVGTPAP 121
BLAST of mRNA_H-canaliculatus_F_contig12604.2187.1 vs. uniprot
Match: D7FJ77_ECTSI (Ferric reductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ77_ECTSI) HSP 1 Score: 113 bits (283), Expect = 7.960e-24 Identity = 73/162 (45.06%), Postives = 100/162 (61.73%), Query Frame = 3
Query: 918 QVVSAAAAWTSVGFSS-DGMMVGSDAVVGLPDDVSVQEYDLTGLSVDQVVVSDVQEVTGGSVSQDASGETTLTFTRPLSPEGDKQTISSTPGDTTILLYSFGTDNTLAYHGPAPSRGSVVLDLFCGDAG--TFAGTPAPSASTSSAPVGGRRGDETPAPSIS 1394
Q+V+++ AW +GF S D +VGSD ++GLPD+ SV EY++ G + ++VVV + Q++T S+ Q A G TTL+F RPLSP G+KQ IS GD T L++ G DN L G V DL+CG G A TPAP+ VGG G ETPAP+++
Sbjct: 62 QMVTSSVAWAGIGFPSVDLDLVGSDVIIGLPDNSSVLEYEVLGETAEEVVVFEQQDITEASIVQ-ADGSTTLSFIRPLSPGGNKQNISYVAGDATKLIFGQGADNELGVISDVTWSGMRV-DLYCGTGGIAALARTPAPTV------VGGGTG-ETPAPTLA 214
BLAST of mRNA_H-canaliculatus_F_contig12604.2187.1 vs. uniprot
Match: A0A6H5JSH0_9PHAE (DOMON domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSH0_9PHAE) HSP 1 Score: 112 bits (281), Expect = 2.430e-23 Identity = 74/157 (47.13%), Postives = 96/157 (61.15%), Query Frame = 3
Query: 924 VSAAAAWTSVGF-SSDGMMVGSDAVVGLPDDVSVQEYDLTGLSVDQVVVSDVQEVTGGSVSQDASGETTLTFTRPLSPEGDKQTISSTPGDTTILLYSFGTDNTLAYHGPAPSRGSVVLDLFCGDAG--TFAGTPAPSASTSSAPVGGRRGDETPAP 1385
V++ AW+ +GF S+D +VGSD ++GLPDD SV EY++ G + ++VVV + Q++T SV Q A G TTL+F RPLSP G+KQ IS GDTT ++ G DN L G V DL+CG G A TPAP+ VGG G ETPAP
Sbjct: 2 VTSTVAWSGIGFPSTDLDLVGSDVIIGLPDDPSVLEYEVLGETAEEVVVFEQQDITEASVVQ-ADGSTTLSFIRPLSPGGNKQNISYEAGDTTKFIFGQGADNDLGVISDVTWSGMRV-DLYCGTGGIAALARTPAPTV------VGGGTG-ETPAP 149
BLAST of mRNA_H-canaliculatus_F_contig12604.2187.1 vs. uniprot
Match: A0A6H5JMX7_9PHAE (DOMON domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMX7_9PHAE) HSP 1 Score: 99.4 bits (246), Expect = 2.620e-18 Identity = 72/157 (45.86%), Postives = 92/157 (58.60%), Query Frame = 3
Query: 942 WTSVGFSSDGMMVGSDAVVGLPDDVSVQEYDLTGLSVDQVVVS------DVQEVTGGSVSQDASGETTLTFTRPLSPEGD-KQTISSTPGDTTILLYSFGTDNTLAYHGPAPSRGSVVLDLFCGDAGTFAGTPAPSASTSSAP-VGGRRGDETPAPS 1388
WT+VGFS DG MVGSDAV+ P+D V E L S +VV+ D E++ SQD +TT +FTR +P+ KQT+ PG L+++ G DN YHG + SRGS +DLFC A GTPAPSA+ + +P VGGR TPAPS
Sbjct: 71 WTAVGFSPDGDMVGSDAVIYRPEDEEVSEQFLDAQS--EVVLDRDEDDRDTDELSDIEFSQDGD-DTTFSFTRNTTPDSSLKQTLPEEPGSQIHLIWALGNDNAFGYHGQS-SRGSFQVDLFCPGAD---GTPAPSAAATVSPTVGGR----TPAPS 216
BLAST of mRNA_H-canaliculatus_F_contig12604.2187.1 vs. uniprot
Match: A0A6H5JKV6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JKV6_9PHAE) HSP 1 Score: 90.9 bits (224), Expect = 4.320e-15 Identity = 54/128 (42.19%), Postives = 77/128 (60.16%), Query Frame = 3
Query: 918 QVVSAAAAWTSVGFSSDGMMVGSDAVVGLPDDVSVQEYDLTGLSVDQVVVSDVQEVTGGSVSQDASGETTLTFTRPLSPEGDKQTI-SSTPGDTTILLYSFGTDNTLAYHGPAPSRGS-VVLDLFCGD 1295
QVV + +GFSS G MV +DAVVGLPD+ + EYDL+ ++ + QE++G SV+Q A TTL FTRPLSP D +T+ S+ G+ ++++G+ NT YH +RG V DL C +
Sbjct: 61 QVVYDGEGFVGLGFSSTGAMVPADAVVGLPDEGTALEYDLSTYALSSDNEHETQEISGASVTQ-ADSTTTLVFTRPLSPADDSKTVLSAEEGEKATFIWAYGSSNTFQYH---EARGDFTVSDLLCSE 184
BLAST of mRNA_H-canaliculatus_F_contig12604.2187.1 vs. uniprot
Match: A0A6H5K1N0_9PHAE (DOMON domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K1N0_9PHAE) HSP 1 Score: 72.4 bits (176), Expect = 9.750e-10 Identity = 55/144 (38.19%), Postives = 78/144 (54.17%), Query Frame = 3
Query: 909 RPTQVVSAA--AAWTSVGFSSDGMMVGSDAVVGLPDDVSVQEYDL--TGLSVDQVVVS----------DVQEVTGGSVSQDASGETTLTFTRPLSPE-GDKQTISSTPGDTTILLYSFGTDNTLAYHGPAPSRGSVVLDLFCGD 1295
R Q +SA W ++GFSSDG M+GSDAVVG + V EYDL GL V + D QE+TG + +D + T+L+FTRP PE KQ + + + ILL++ G+D++ YH RG+ +DL C +
Sbjct: 107 RNKQAISADFNVGWLAIGFSSDGNMIGSDAVVGSIE--GVLEYDLGSKGLPVQPPLSPLEASIRPYSVDEQEITGAVLERDEN-VTSLSFTRPTIPEVSGKQALLAGADTSAILLWAAGSDDSFGYH--FLGRGAFSIDLACSE 245
BLAST of mRNA_H-canaliculatus_F_contig12604.2187.1 vs. uniprot
Match: A0A7S2SLX0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SLX0_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 4.860e-8 Identity = 44/118 (37.29%), Postives = 69/118 (58.47%), Query Frame = 3
Query: 939 AWTSVGFS-SDGMMVGSDAVVGLPDDVSVQEYDLTGLSVDQVVVSD-VQEVTGGSVSQDASGETTLTFTRPLSPEGDKQTISSTPGDTTILLYSFGTDNTLAYHGPAPSRGSVVLDLF 1286
AW ++G S S G+MVGS+ V+GLP+D +V +YDLT S V + V++ G+V + G TT+ F++ L G+ I+ +Y++G+ N+LA H RG+VV+DL
Sbjct: 37 AWVALGVSDSGGLMVGSEVVLGLPNDGTVLKYDLTERSASGVEEAPTVRQTLNGTVLVQSGGVTTMQFSKLLEESGE---IAIDGRGENTFVYAYGSGNSLAVH---EGRGAVVVDLL 148
BLAST of mRNA_H-canaliculatus_F_contig12604.2187.1 vs. uniprot
Match: A0A7S2UHV0_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UHV0_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 2.360e-7 Identity = 42/123 (34.15%), Postives = 74/123 (60.16%), Query Frame = 3
Query: 936 AAWTSVGFSSDGMMVGSDAVVGLPDDVSVQEYDLTGLSVDQVVVSDVQEVT--GGSVSQDASGETTLTFTRPLSPEGDKQTISSTPGDTTILLYSFGTDNTLAYHGPAPSRGSVVLDLF-CGD 1295
A W ++G + +G M+G++AV+GLPD+ +VQ+Y+L S + + + T G S++Q A+G+T L F + L G+ + + G+T + +++ G N L++H RG+V LDL CG+
Sbjct: 293 AGWVAIGVTPNGDMIGAEAVIGLPDEGTVQKYELNDKSTSSITPLEKGQDTLKGTSITQ-ANGKTILKFEKILKESGELEIKAK--GET-LFMFAVGNTNALSFH---KHRGAVRLDLSKCGE 408 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12604.2187.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig12604.2187.1 >prot_H-canaliculatus_F_contig12604.2187.1 ID=prot_H-canaliculatus_F_contig12604.2187.1|Name=mRNA_H-canaliculatus_F_contig12604.2187.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=295bp MMVGSDAVVGLPDDVSVQEYDLTGLSVDQVVVSDVQEVTGGSVSQDASGEback to top mRNA from alignment at H-canaliculatus_F_contig12604:40..3571+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig12604.2187.1 ID=mRNA_H-canaliculatus_F_contig12604.2187.1|Name=mRNA_H-canaliculatus_F_contig12604.2187.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3532bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12604:40..3571+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig12604:40..3571+ >mRNA_H-canaliculatus_F_contig12604.2187.1 ID=mRNA_H-canaliculatus_F_contig12604.2187.1|Name=mRNA_H-canaliculatus_F_contig12604.2187.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1770bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12604:40..3571+ (Hapterophycus canaliculatus Oshoro5f female)back to top |