mRNA_H-canaliculatus_F_contig12586.2169.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig12586.2169.1 vs. uniprot
Match: D7FS22_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS22_ECTSI) HSP 1 Score: 194 bits (492), Expect = 3.450e-55 Identity = 99/108 (91.67%), Postives = 103/108 (95.37%), Query Frame = 1
Query: 1 SPAEFLDRAVEPPPPKMLRAALRNLYDLQAIVISKNMPILTPLGYHLAHLPMDACVGKLLIIAAVLQCLDPILTIAAALSDKAPFQRPFGEQARADKARQNFAQNKSD 324
SPAEFLDRAVEPPPPKMLRAALRNL DLQAI+IS + PILTPLGYHLAHLPMDACVGKLL+IAA+LQCLDPILTIAAALSDKAPFQRPFGEQARADKARQ FAQ KSD
Sbjct: 1063 SPAEFLDRAVEPPPPKMLRAALRNLDDLQAIIISNSTPILTPLGYHLAHLPMDACVGKLLLIAAILQCLDPILTIAAALSDKAPFQRPFGEQARADKARQGFAQGKSD 1170
BLAST of mRNA_H-canaliculatus_F_contig12586.2169.1 vs. uniprot
Match: A0A835Z4K1_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4K1_9STRA) HSP 1 Score: 121 bits (304), Expect = 7.510e-30 Identity = 63/96 (65.62%), Postives = 75/96 (78.12%), Query Frame = 1
Query: 4 PAEFLDRAVEPPPPKMLRAALRNLYDLQAIVISKNM--PILTPLGYHLAHLPMDACVGKLLIIAAVLQCLDPILTIAAALSDKAPFQRPFGEQARA 285
PA L RAV+PPP KML AALRNLY+L+A+ ++ + LTPLGYHLAHLPMDA VGKLLI+ A+L+CLDP+LT+AAALS K PF RP G A A
Sbjct: 631 PASVLARAVQPPPEKMLHAALRNLYELEAVQVAPDTLETSLTPLGYHLAHLPMDARVGKLLIMGALLRCLDPVLTVAAALSSKTPFVRPMGSAAEA 726
BLAST of mRNA_H-canaliculatus_F_contig12586.2169.1 vs. uniprot
Match: K8ZAB1_NANGC (Helicase domain-containing protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8ZAB1_NANGC) HSP 1 Score: 108 bits (269), Expect = 3.890e-25 Identity = 57/114 (50.00%), Postives = 78/114 (68.42%), Query Frame = 1
Query: 1 SPAEFLDRAVEPPPPKMLRAALRNLYDLQAIVISKNMPI------LTPLGYHLAHLPMDACVGKLLIIAAVLQCLDPILTIAAALSDKAPFQRPFGEQARADKARQNFAQNKSD 324
SPA+FL RA+EPPPP+ + A++NL ++ A+ K++ L PLG+HLA+LP DA +GK+LII ++L CL+PILTIAA LS K+PF PFG Q AD+A + SD
Sbjct: 582 SPADFLARAIEPPPPEAISTAVKNLREIDALRKQKDLDTKEVSYYLMPLGFHLANLPCDARIGKMLIIGSILGCLEPILTIAACLSYKSPFSNPFGMQQEADRAHAKYGSALSD 695
BLAST of mRNA_H-canaliculatus_F_contig12586.2169.1 vs. uniprot
Match: W7TVU1_9STRA (Atp-dependent rna helicase dhx57 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TVU1_9STRA) HSP 1 Score: 108 bits (269), Expect = 4.000e-25 Identity = 57/114 (50.00%), Postives = 78/114 (68.42%), Query Frame = 1
Query: 1 SPAEFLDRAVEPPPPKMLRAALRNLYDLQAIVISKNMPI------LTPLGYHLAHLPMDACVGKLLIIAAVLQCLDPILTIAAALSDKAPFQRPFGEQARADKARQNFAQNKSD 324
SPA+FL RA+EPPPP+ + A++NL ++ A+ K++ L PLG+HLA+LP DA +GK+LII ++L CL+PILTIAA LS K+PF PFG Q AD+A + SD
Sbjct: 809 SPADFLARAIEPPPPEAISTAVKNLREIDALRKQKDLDTKEVSYYLMPLGFHLANLPCDARIGKMLIIGSILGCLEPILTIAACLSYKSPFSNPFGMQQEADRAHAKYGSALSD 922
BLAST of mRNA_H-canaliculatus_F_contig12586.2169.1 vs. uniprot
Match: W7T633_9STRA (Putative atp-dependent rna helicase dhx36 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T633_9STRA) HSP 1 Score: 107 bits (268), Expect = 5.470e-25 Identity = 54/113 (47.79%), Postives = 79/113 (69.91%), Query Frame = 1
Query: 4 PAEFLDRAVEPPPPKMLRAALRNLYDLQAIVISKNMP------ILTPLGYHLAHLPMDACVGKLLIIAAVLQCLDPILTIAAALSDKAPFQRPFGEQARADKARQNFAQNKSD 324
P FL RAVEPP PK ++A+L+ L D++A+ + +P +L PLG+HLA LP+D +GK+L+ A++ C+DPILTIAAA S ++PF P G++ A A+Q FA++KSD
Sbjct: 902 PEAFLQRAVEPPSPKAVKASLQVLLDIEAVALGPPLPNGSRAIVLNPLGFHLASLPVDCRLGKMLVFASLFACVDPILTIAAAFSSRSPFVAPIGKREEAQLAKQRFAEDKSD 1014
BLAST of mRNA_H-canaliculatus_F_contig12586.2169.1 vs. uniprot
Match: A0A367KRQ3_RHIST (Uncharacterized protein (Fragment) n=1 Tax=Rhizopus stolonifer TaxID=4846 RepID=A0A367KRQ3_RHIST) HSP 1 Score: 100 bits (250), Expect = 1.480e-22 Identity = 53/103 (51.46%), Postives = 71/103 (68.93%), Query Frame = 1
Query: 16 LDRAVEPPPPKMLRAALRNLYDLQAIVISKNMPILTPLGYHLAHLPMDACVGKLLIIAAVLQCLDPILTIAAALSDKAPFQRPFGEQARADKARQNFAQNKSD 324
L A++PP KM+ AL +L ++QA+ I +LTPLG HL++LP+D +GK++I A+ +CLDPILTIAAALS K+PF RPFG + AD AR F SD
Sbjct: 1137 LSDALDPPSDKMIENALLSLQEVQALAIDNGKEVLTPLGSHLSNLPVDVHMGKMIIYGALFRCLDPILTIAAALSFKSPFIRPFGREDEADIARARFQVGNSD 1239
BLAST of mRNA_H-canaliculatus_F_contig12586.2169.1 vs. uniprot
Match: A0A261XU11_9FUNG (Uncharacterized protein (Fragment) n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261XU11_9FUNG) HSP 1 Score: 100 bits (249), Expect = 2.050e-22 Identity = 52/105 (49.52%), Postives = 71/105 (67.62%), Query Frame = 1
Query: 10 EFLDRAVEPPPPKMLRAALRNLYDLQAIVISKNMPILTPLGYHLAHLPMDACVGKLLIIAAVLQCLDPILTIAAALSDKAPFQRPFGEQARADKARQNFAQNKSD 324
E L + +EPPP K + A+ +L D+QA+V + ILTPLG HLA LP+D +GKL++ A +CLD LTIAA LS K+PF RPFG+++ +D +R FA SD
Sbjct: 1596 ETLTQVIEPPPGKAIDNAIHSLIDVQALVHKDDEDILTPLGGHLARLPVDVHIGKLILYGAFFKCLDAALTIAAFLSHKSPFVRPFGKESESDTSRNEFASEHSD 1700
BLAST of mRNA_H-canaliculatus_F_contig12586.2169.1 vs. uniprot
Match: A0A1X2IF32_9FUNG (p-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Absidia repens TaxID=90262 RepID=A0A1X2IF32_9FUNG) HSP 1 Score: 100 bits (248), Expect = 2.750e-22 Identity = 51/103 (49.51%), Postives = 72/103 (69.90%), Query Frame = 1
Query: 10 EFLDRAVEPPPPKMLRAALRNLYDLQAIVISKNMPILTPLGYHLAHLPMDACVGKLLIIAAVLQCLDPILTIAAALSDKAPFQRPFGEQARADKARQNFAQNK 318
+ L A++ P KM++ A+ L +QA+ ++ LTPLG HL+HLP+D +GK+++ A+ +CLDPILTIAAALS K+PF RPFG + ADKAR+ F Q K
Sbjct: 1155 QVLGSALDAPSSKMVKNAIETLQQVQALADDESQE-LTPLGAHLSHLPVDVHIGKMILFGAIFRCLDPILTIAAALSFKSPFVRPFGNEDEADKAREQFKQGK 1256
BLAST of mRNA_H-canaliculatus_F_contig12586.2169.1 vs. uniprot
Match: A0A7M7PTL5_STRPU (Uncharacterized protein n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7PTL5_STRPU) HSP 1 Score: 99.8 bits (247), Expect = 3.750e-22 Identity = 51/105 (48.57%), Postives = 74/105 (70.48%), Query Frame = 1
Query: 10 EFLDRAVEPPPPKMLRAALRNLYDLQAIVISKNMPILTPLGYHLAHLPMDACVGKLLIIAAVLQCLDPILTIAAALSDKAPFQRPFGEQARADKARQNFAQNKSD 324
E L++ +EPP + + A++ L DL A+ + ++ LTPLGYHLA LP+D +GKL++ A+ QCLDP+LTIAA+LS ++PF PF ++ +ADK RQ FA SD
Sbjct: 1060 EVLNKLLEPPKNENIDDAIQRLQDLGAVTLDQD---LTPLGYHLASLPVDVRIGKLMLFGAIFQCLDPVLTIAASLSFRSPFMAPFDKRDQADKKRQEFAVGNSD 1161
BLAST of mRNA_H-canaliculatus_F_contig12586.2169.1 vs. uniprot
Match: A0A507ECL4_9FUNG (Uncharacterized protein n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507ECL4_9FUNG) HSP 1 Score: 99.0 bits (245), Expect = 7.020e-22 Identity = 50/106 (47.17%), Postives = 73/106 (68.87%), Query Frame = 1
Query: 7 AEFLDRAVEPPPPKMLRAALRNLYDLQAIVISKNMPILTPLGYHLAHLPMDACVGKLLIIAAVLQCLDPILTIAAALSDKAPFQRPFGEQARADKARQNFAQNKSD 324
A+ LD+ +EPP P+ +R A+ L LQA+ ++ LTPLG+HL LP+D +GKLL+ ++ QCLDP+LTIAAA+S K+PF PF + +AD+ ++ FA SD
Sbjct: 1302 AQILDKVIEPPSPEAVRQAVLTLRTLQALTKEED---LTPLGFHLGRLPLDVRIGKLLVFGSIFQCLDPVLTIAAAMSHKSPFVAPFEIRDQADRKKREFAIENSD 1404 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12586.2169.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig12586.2169.1 >prot_H-canaliculatus_F_contig12586.2169.1 ID=prot_H-canaliculatus_F_contig12586.2169.1|Name=mRNA_H-canaliculatus_F_contig12586.2169.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=108bp SPAEFLDRAVEPPPPKMLRAALRNLYDLQAIVISKNMPILTPLGYHLAHLback to top mRNA from alignment at H-canaliculatus_F_contig12586:191..1712+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig12586.2169.1 ID=mRNA_H-canaliculatus_F_contig12586.2169.1|Name=mRNA_H-canaliculatus_F_contig12586.2169.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1522bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12586:191..1712+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig12586:191..1712+ >mRNA_H-canaliculatus_F_contig12586.2169.1 ID=mRNA_H-canaliculatus_F_contig12586.2169.1|Name=mRNA_H-canaliculatus_F_contig12586.2169.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=648bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12586:191..1712+ (Hapterophycus canaliculatus Oshoro5f female)back to top |