mRNA_H-canaliculatus_F_contig12575.2161.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig12575.2161.1
Unique NamemRNA_H-canaliculatus_F_contig12575.2161.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
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BLAST of mRNA_H-canaliculatus_F_contig12575.2161.1 vs. uniprot
Match: D7G6R8_ECTSI (AAA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6R8_ECTSI)

HSP 1 Score: 469 bits (1208), Expect = 2.490e-164
Identity = 237/247 (95.95%), Postives = 245/247 (99.19%), Query Frame = 1 
Query:    1 VSSRQVKEAVELPLTHFELYKQIGIDPPRGVLMYGPPGTGKTMMAKAVANATSASFISVVGSEFVQKYLGEGPRMVRDVFRLARENSPSVVFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPVPDRRQKRMVFTACTSKMNLSEEVDLEDYVNRPEKISSADISAIAQEAGLQAVRENRYVVLGKDLDKAYKKHVNKHDTEHAFYS 741
            +  ++VKEAVELPLTHF+LYKQIGIDPPRGVLMYGPPGTGKTMMAKAVANATSASFISVVGSEFVQKYLGEGPRMVRDVFRLARENSPSVVFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPVPDRRQKRMVFTACT+KMNLSEEVDLEDYVNRPEK+S+ADISAIAQEAGLQAVR+NRYVVLGKDLDKAYKKHVNKHDTEHAFYS
Sbjct:  168 MQKQEVKEAVELPLTHFDLYKQIGIDPPRGVLMYGPPGTGKTMMAKAVANATSASFISVVGSEFVQKYLGEGPRMVRDVFRLARENSPSVVFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPVPDRRQKRMVFTACTAKMNLSEEVDLEDYVNRPEKVSAADISAIAQEAGLQAVRKNRYVVLGKDLDKAYKKHVNKHDTEHAFYS 414
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BLAST of mRNA_H-canaliculatus_F_contig12575.2161.1 vs. uniprot
Match: A0A835ZCH4_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCH4_9STRA)

HSP 1 Score: 445 bits (1145), Expect = 5.080e-155
Identity = 226/247 (91.50%), Postives = 238/247 (96.36%), Query Frame = 1 
Query:    1 VSSRQVKEAVELPLTHFELYKQIGIDPPRGVLMYGPPGTGKTMMAKAVANATSASFISVVGSEFVQKYLGEGPRMVRDVFRLARENSPSVVFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPVPDRRQKRMVFTACTSKMNLSEEVDLEDYVNRPEKISSADISAIAQEAGLQAVRENRYVVLGKDLDKAYKKHVNKHDTEHAFYS 741
            +  ++VKEAVELPLTHFELY+QIGIDPPRGVL+YGPPGTGKTMMAKAVANAT+ASFISVVGSEFVQKYLGEGPRMVRDVFRLARENSPSV+FIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQ+TNVKVIMATNRADTLDPALLRPGRLDRKIEFP PDRRQKR+VFTAC SKMNLSEEVDLEDYVNRPEKIS+ADISAI QEAGLQAVR+NRYVVLGKDLDKAYK +VNK D E AFYS
Sbjct:  150 MQKQEVKEAVELPLTHFELYRQIGIDPPRGVLLYGPPGTGKTMMAKAVANATTASFISVVGSEFVQKYLGEGPRMVRDVFRLARENSPSVIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPNPDRRQKRLVFTACVSKMNLSEEVDLEDYVNRPEKISAADISAICQEAGLQAVRQNRYVVLGKDLDKAYKNNVNKADKELAFYS 396
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BLAST of mRNA_H-canaliculatus_F_contig12575.2161.1 vs. uniprot
Match: K8Z3K8_NANGC (26S proteasome regulatory subunit T3 n=5 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z3K8_NANGC)

HSP 1 Score: 439 bits (1130), Expect = 1.570e-152
Identity = 220/247 (89.07%), Postives = 235/247 (95.14%), Query Frame = 1 
Query:    1 VSSRQVKEAVELPLTHFELYKQIGIDPPRGVLMYGPPGTGKTMMAKAVANATSASFISVVGSEFVQKYLGEGPRMVRDVFRLARENSPSVVFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPVPDRRQKRMVFTACTSKMNLSEEVDLEDYVNRPEKISSADISAIAQEAGLQAVRENRYVVLGKDLDKAYKKHVNKHDTEHAFYS 741
            +  ++VKEAVELPLTHFELYKQIGIDPPRGVLMYGPPGTGKTMMAKAVA AT+ASFISVVGSEFVQKYLGEGPRMVRDVFRLARENSPS+VFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFP PDRRQKRMVF ACT+KMNL ++VDLEDYVNRPEKIS+AD++AIAQEAGLQAVR+NRYV+L +D D+AYKKHV K D EH FYS
Sbjct:  164 IQKQEVKEAVELPLTHFELYKQIGIDPPRGVLMYGPPGTGKTMMAKAVAQATTASFISVVGSEFVQKYLGEGPRMVRDVFRLARENSPSIVFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPNPDRRQKRMVFQACTAKMNLGDDVDLEDYVNRPEKISAADVAAIAQEAGLQAVRKNRYVILARDFDEAYKKHVTKADKEHWFYS 410
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BLAST of mRNA_H-canaliculatus_F_contig12575.2161.1 vs. uniprot
Match: A0A7S2RC03_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RC03_9STRA)

HSP 1 Score: 439 bits (1129), Expect = 3.600e-152
Identity = 222/247 (89.88%), Postives = 234/247 (94.74%), Query Frame = 1 
Query:    1 VSSRQVKEAVELPLTHFELYKQIGIDPPRGVLMYGPPGTGKTMMAKAVANATSASFISVVGSEFVQKYLGEGPRMVRDVFRLARENSPSVVFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPVPDRRQKRMVFTACTSKMNLSEEVDLEDYVNRPEKISSADISAIAQEAGLQAVRENRYVVLGKDLDKAYKKHVNKHDTEHAFYS 741
            +  ++V+EAVELPLT FELYKQIGIDPPRGVLMYGPPGTGKTMMAKAVANAT+ASFISVVGSEFVQKYLGEGPRMVRDVFRLARENSPS++FIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQ+TNVKVIMATNRADTLDPALLRPGRLDRKIEFP PDRRQKRMV  ACTSKMNLSEE+DLEDYVNRPEKIS+AD+SAI QEAGLQAVRENRYVVL KD D AYKKHVNK D + AFYS
Sbjct:  179 IQKQEVREAVELPLTQFELYKQIGIDPPRGVLMYGPPGTGKTMMAKAVANATTASFISVVGSEFVQKYLGEGPRMVRDVFRLARENSPSIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPNPDRRQKRMVLQACTSKMNLSEEMDLEDYVNRPEKISAADLSAICQEAGLQAVRENRYVVLTKDFDNAYKKHVNKADKDFAFYS 425
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BLAST of mRNA_H-canaliculatus_F_contig12575.2161.1 vs. uniprot
Match: A0A6V1PIA9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PIA9_HETAK)

HSP 1 Score: 430 bits (1106), Expect = 6.300e-149
Identity = 211/247 (85.43%), Postives = 236/247 (95.55%), Query Frame = 1 
Query:    1 VSSRQVKEAVELPLTHFELYKQIGIDPPRGVLMYGPPGTGKTMMAKAVANATSASFISVVGSEFVQKYLGEGPRMVRDVFRLARENSPSVVFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPVPDRRQKRMVFTACTSKMNLSEEVDLEDYVNRPEKISSADISAIAQEAGLQAVRENRYVVLGKDLDKAYKKHVNKHDTEHAFYS 741
            +  ++++EAVELPLTHF+LYKQIGIDPPRGVL+YGPPGTGKTM+AKAVAN+T+A+FIS+VGSEFVQKYLGEGPRMVRDVFRLAREN+P++VFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQ+TNVKVIM TNR DTLDPALLRPGRLDRKIEFP PDRRQKR+VF A T+KMNLSE++DLEDYVNRPEKISSAD++AI QEAGLQAVR+NRYV+LGKD D+AYKKHVNK D EHAFYS
Sbjct:  161 MQKQELREAVELPLTHFQLYKQIGIDPPRGVLLYGPPGTGKTMIAKAVANSTTAAFISMVGSEFVQKYLGEGPRMVRDVFRLARENAPAIVFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQATNVKVIMCTNRPDTLDPALLRPGRLDRKIEFPEPDRRQKRLVFQAATAKMNLSEDLDLEDYVNRPEKISSADVAAICQEAGLQAVRQNRYVILGKDFDEAYKKHVNKADKEHAFYS 407
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BLAST of mRNA_H-canaliculatus_F_contig12575.2161.1 vs. uniprot
Match: A0A7S2XX15_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XX15_9STRA)

HSP 1 Score: 428 bits (1101), Expect = 3.160e-148
Identity = 216/247 (87.45%), Postives = 232/247 (93.93%), Query Frame = 1 
Query:    1 VSSRQVKEAVELPLTHFELYKQIGIDPPRGVLMYGPPGTGKTMMAKAVANATSASFISVVGSEFVQKYLGEGPRMVRDVFRLARENSPSVVFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPVPDRRQKRMVFTACTSKMNLSEEVDLEDYVNRPEKISSADISAIAQEAGLQAVRENRYVVLGKDLDKAYKKHVNKHDTEHAFYS 741
            +  ++++EAVELPLTHFELYKQIGIDPPRGVL+YGPPGTGKTM+AKAVANAT+ASFISVVGSEFVQKYLGEGPRMVRDVFRLA+ENSPS+VFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQ+T VKVIMATNR DTLDPALLRPGRLDRKIEFP PDRRQKR+VF ACTSKMNLSE++DLEDYVNR EKIS+ADISAI QEAGL AVRENRYVVL KD DKAYK + NK D EHAFYS
Sbjct:  157 MQKQELREAVELPLTHFELYKQIGIDPPRGVLLYGPPGTGKTMIAKAVANATTASFISVVGSEFVQKYLGEGPRMVRDVFRLAKENSPSIVFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTTVKVIMATNRPDTLDPALLRPGRLDRKIEFPNPDRRQKRLVFQACTSKMNLSEDLDLEDYVNRAEKISAADISAICQEAGLCAVRENRYVVLPKDFDKAYKNNTNKQDKEHAFYS 403
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BLAST of mRNA_H-canaliculatus_F_contig12575.2161.1 vs. uniprot
Match: F0YA82_AURAN (AAA domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YA82_AURAN)

HSP 1 Score: 427 bits (1099), Expect = 5.550e-148
Identity = 213/247 (86.23%), Postives = 233/247 (94.33%), Query Frame = 1 
Query:    1 VSSRQVKEAVELPLTHFELYKQIGIDPPRGVLMYGPPGTGKTMMAKAVANATSASFISVVGSEFVQKYLGEGPRMVRDVFRLARENSPSVVFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPVPDRRQKRMVFTACTSKMNLSEEVDLEDYVNRPEKISSADISAIAQEAGLQAVRENRYVVLGKDLDKAYKKHVNKHDTEHAFYS 741
            V  ++++EAVELPLT FELYKQIGIDPPRGVLMYGPPGTGKTMMAKAVAN+T+ASFISVVGSEFVQKYLGEGPRMVRDVFRLAREN+P+++FIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFP PDRRQKR+VF ACT+ MNLS+ VDLEDYV+RPE++S+AD SAIA EAGL AVRENRYVV+ KDLD AYKKHVNK DT+ AFY+
Sbjct:  153 VQKQEMREAVELPLTQFELYKQIGIDPPRGVLMYGPPGTGKTMMAKAVANSTTASFISVVGSEFVQKYLGEGPRMVRDVFRLARENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPAPDRRQKRLVFQACTANMNLSDTVDLEDYVSRPERVSAADCSAIANEAGLHAVRENRYVVMPKDLDAAYKKHVNKADTDFAFYT 399
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BLAST of mRNA_H-canaliculatus_F_contig12575.2161.1 vs. uniprot
Match: A0A8J2SXQ2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SXQ2_9STRA)

HSP 1 Score: 422 bits (1085), Expect = 1.240e-145
Identity = 211/247 (85.43%), Postives = 231/247 (93.52%), Query Frame = 1 
Query:    1 VSSRQVKEAVELPLTHFELYKQIGIDPPRGVLMYGPPGTGKTMMAKAVANATSASFISVVGSEFVQKYLGEGPRMVRDVFRLARENSPSVVFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPVPDRRQKRMVFTACTSKMNLSEEVDLEDYVNRPEKISSADISAIAQEAGLQAVRENRYVVLGKDLDKAYKKHVNKHDTEHAFYS 741
            V  ++++EAVELPLT FELY+QIGIDPPRGVLMYGPPGTGKTMMAKAVAN+T+ASFISVVGSEFVQKYLGEGPRMVRDVFRLAREN+P++VFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQ+TNVKVIMATNRADTLDPALLRPGRLDRKIEFP PDRRQKR+V  ACT+ MNL++ VDLEDYVNRPE++S+AD SAIA EAGL AVRENRYVVL KDLD AYKKHVNK  T+ AFY+
Sbjct:  168 VQKQEMREAVELPLTQFELYRQIGIDPPRGVLMYGPPGTGKTMMAKAVANSTTASFISVVGSEFVQKYLGEGPRMVRDVFRLARENAPAIVFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQATNVKVIMATNRADTLDPALLRPGRLDRKIEFPPPDRRQKRLVLQACTANMNLADSVDLEDYVNRPERVSAADCSAIANEAGLHAVRENRYVVLPKDLDAAYKKHVNKASTDFAFYT 414
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BLAST of mRNA_H-canaliculatus_F_contig12575.2161.1 vs. uniprot
Match: A0A8K1FEB1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FEB1_PYTOL)

HSP 1 Score: 420 bits (1080), Expect = 5.080e-145
Identity = 207/246 (84.15%), Postives = 231/246 (93.90%), Query Frame = 1 
Query:    1 VSSRQVKEAVELPLTHFELYKQIGIDPPRGVLMYGPPGTGKTMMAKAVANATSASFISVVGSEFVQKYLGEGPRMVRDVFRLARENSPSVVFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPVPDRRQKRMVFTACTSKMNLSEEVDLEDYVNRPEKISSADISAIAQEAGLQAVRENRYVVLGKDLDKAYKKHVNKHDTEHAFY 738
            V  ++V+EAVELPLTHF+LYKQIG+DPPRGVLMYGPPGTGKTM+AKAVANAT+ASFI VVGSEFVQKYLGEGPRMVRDVFRLA+ENSPS+VFIDE+DAIATKRFDAQTGADREVQRILLELLNQMDGFDQ+TNVKVIMATNRADTLDPALLRPGRLDRKIEFP+PDRRQKR+++ ACT+KMNLS+EVDLED+VNRPEKISSADI++I QEAGLQAVR+NRYVVL KD +K YK  + + DT   FY
Sbjct:  159 VQKQEVREAVELPLTHFDLYKQIGVDPPRGVLMYGPPGTGKTMLAKAVANATTASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPSIVFIDEVDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIYQACTAKMNLSDEVDLEDFVNRPEKISSADIASICQEAGLQAVRKNRYVVLPKDFEKGYKNAIKRADTTFEFY 404
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BLAST of mRNA_H-canaliculatus_F_contig12575.2161.1 vs. uniprot
Match: H3HD78_PHYRM (AAA domain-containing protein n=21 Tax=Oomycota TaxID=4762 RepID=H3HD78_PHYRM)

HSP 1 Score: 419 bits (1077), Expect = 1.450e-144
Identity = 205/246 (83.33%), Postives = 230/246 (93.50%), Query Frame = 1 
Query:    1 VSSRQVKEAVELPLTHFELYKQIGIDPPRGVLMYGPPGTGKTMMAKAVANATSASFISVVGSEFVQKYLGEGPRMVRDVFRLARENSPSVVFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPVPDRRQKRMVFTACTSKMNLSEEVDLEDYVNRPEKISSADISAIAQEAGLQAVRENRYVVLGKDLDKAYKKHVNKHDTEHAFY 738
            +  ++V+EAVELPLTHF+LYKQIG+DPPRGVLMYGPPGTGKTM+AKAVANAT+A+FISVVGSEFVQKYLGEGPRMVRDVFRLA+ENSP++VFIDE+DAIATKRFDAQTGADREVQRILLELLNQMDGFDQ+TNVKVIMATNRADTLDPALLRPGRLDRKIEFP+PDRRQKR+++ ACT+ MNL +EVDLEDYVNRPEKISSADI++I QEAGLQAVR+NRYVVL KD DK YK  + + DT   FY
Sbjct:  159 IQKQEVREAVELPLTHFDLYKQIGVDPPRGVLMYGPPGTGKTMLAKAVANATTAAFISVVGSEFVQKYLGEGPRMVRDVFRLAKENSPAIVFIDEVDAIATKRFDAQTGADREVQRILLELLNQMDGFDQATNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIYQACTANMNLGDEVDLEDYVNRPEKISSADIASICQEAGLQAVRKNRYVVLPKDFDKGYKNAIKRADTTFEFY 404
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12575.2161.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6R8_ECTSI2.490e-16495.95AAA domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835ZCH4_9STRA5.080e-15591.50P-loop containing nucleoside triphosphate hydrolas... [more]
K8Z3K8_NANGC1.570e-15289.0726S proteasome regulatory subunit T3 n=5 Tax=Monod... [more]
A0A7S2RC03_9STRA3.600e-15289.88Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A6V1PIA9_HETAK6.300e-14985.43Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2XX15_9STRA3.160e-14887.45Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
F0YA82_AURAN5.550e-14886.23AAA domain-containing protein n=1 Tax=Aureococcus ... [more]
A0A8J2SXQ2_9STRA1.240e-14585.43Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A8K1FEB1_PYTOL5.080e-14584.15Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
H3HD78_PHYRM1.450e-14483.33AAA domain-containing protein n=21 Tax=Oomycota Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12575contigH-canaliculatus_F_contig12575:5..2868 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score474.2
Seed ortholog evalue3.8e-131
Seed eggNOG ortholog2880.D7G6R8
Preferred namePSMC4
KEGG koko:K03063
KEGG Pathwayko03050,ko05169,map03050,map05169
KEGG ModuleM00341
GOsGO:0000166,GO:0000228,GO:0000502,GO:0000731,GO:0000785,GO:0000790,GO:0001673,GO:0001701,GO:0001824,GO:0002020,GO:0002082,GO:0003674,GO:0003824,GO:0005102,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0005783,GO:0005789,GO:0005811,GO:0005829,GO:0005838,GO:0005911,GO:0006139,GO:0006140,GO:0006163,GO:0006259,GO:0006281,GO:0006301,GO:0006302,GO:0006325,GO:0006355,GO:0006357,GO:0006464,GO:0006486,GO:0006487,GO:0006508,GO:0006511,GO:0006515,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006886,GO:0006888,GO:0006914,GO:0006919,GO:0006950,GO:0006970,GO:0006972,GO:0006974,GO:0006996,GO:0007034,GO:0007041,GO:0007088,GO:0007275,GO:0007346,GO:0008047,GO:0008104,GO:0008134,GO:0008144,GO:0008150,GO:0008152,GO:0008333,GO:0008540,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009109,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009166,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009506,GO:0009628,GO:0009790,GO:0009792,GO:0009889,GO:0009891,GO:0009893,GO:0009894,GO:0009896,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010243,GO:0010468,GO:0010498,GO:0010556,GO:0010557,GO:0010562,GO:0010564,GO:0010604,GO:0010628,GO:0010638,GO:0010646,GO:0010647,GO:0010918,GO:0010941,GO:0010942,GO:0010950,GO:0010952,GO:0010965,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016032,GO:0016043,GO:0016192,GO:0016197,GO:0016234,GO:0016236,GO:0016462,GO:0016504,GO:0016567,GO:0016579,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017025,GO:0017076,GO:0017111,GO:0017144,GO:0018130,GO:0018193,GO:0018196,GO:0018279,GO:0019058,GO:0019079,GO:0019219,GO:0019220,GO:0019222,GO:0019362,GO:0019438,GO:0019439,GO:0019538,GO:0019637,GO:0019674,GO:0019693,GO:0019899,GO:0019902,GO:0019903,GO:0019904,GO:0019941,GO:0019985,GO:0022411,GO:0022607,GO:0022624,GO:0023051,GO:0023056,GO:0030054,GO:0030071,GO:0030111,GO:0030162,GO:0030163,GO:0030177,GO:0030234,GO:0030312,GO:0030433,GO:0030554,GO:0030808,GO:0030810,GO:0030970,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031329,GO:0031331,GO:0031334,GO:0031399,GO:0031401,GO:0031593,GO:0031595,GO:0031597,GO:0031625,GO:0031974,GO:0031981,GO:0031984,GO:0032268,GO:0032270,GO:0032434,GO:0032436,GO:0032446,GO:0032501,GO:0032502,GO:0032509,GO:0032510,GO:0032527,GO:0032553,GO:0032555,GO:0032559,GO:0032984,GO:0032991,GO:0033036,GO:0033043,GO:0033044,GO:0033045,GO:0033047,GO:0033554,GO:0034098,GO:0034214,GO:0034399,GO:0034404,GO:0034613,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0034976,GO:0035639,GO:0035800,GO:0035861,GO:0035966,GO:0035967,GO:0036094,GO:0036211,GO:0036402,GO:0036435,GO:0036503,GO:0036513,GO:0042175,GO:0042176,GO:0042221,GO:0042287,GO:0042288,GO:0042325,GO:0042327,GO:0042391,GO:0042623,GO:0042726,GO:0042728,GO:0042802,GO:0042886,GO:0042981,GO:0043009,GO:0043065,GO:0043067,GO:0043068,GO:0043073,GO:0043085,GO:0043161,GO:0043167,GO:0043168,GO:0043170,GO:0043209,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043248,GO:0043254,GO:0043280,GO:0043281,GO:0043412,GO:0043413,GO:0043457,GO:0043467,GO:0043531,GO:0043632,GO:0043687,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044389,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044425,GO:0044427,GO:0044428,GO:0044432,GO:0044444,GO:0044445,GO:0044446,GO:0044454,GO:0044464,GO:0044877,GO:0045184,GO:0045202,GO:0045732,GO:0045787,GO:0045838,GO:0045840,GO:0045842,GO:0045862,GO:0045893,GO:0045898,GO:0045899,GO:0045931,GO:0045935,GO:0045937,GO:0045944,GO:0045981,GO:0046034,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046907,GO:0048193,GO:0048471,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0048856,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051174,GO:0051179,GO:0051186,GO:0051187,GO:0051234,GO:0051246,GO:0051247,GO:0051252,GO:0051254,GO:0051259,GO:0051260,GO:0051276,GO:0051336,GO:0051345,GO:0051603,GO:0051641,GO:0051649,GO:0051704,GO:0051716,GO:0051726,GO:0051781,GO:0051783,GO:0051785,GO:0051788,GO:0051881,GO:0051983,GO:0051984,GO:0052547,GO:0052548,GO:0055044,GO:0055086,GO:0060255,GO:0060260,GO:0060261,GO:0060828,GO:0061134,GO:0061136,GO:0061641,GO:0061857,GO:0061919,GO:0062012,GO:0062013,GO:0062033,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070085,GO:0070646,GO:0070647,GO:0070682,GO:0070727,GO:0070841,GO:0070842,GO:0070887,GO:0071218,GO:0071310,GO:0071702,GO:0071704,GO:0071705,GO:0071712,GO:0071840,GO:0071897,GO:0071944,GO:0071985,GO:0072387,GO:0072389,GO:0072521,GO:0072524,GO:0080090,GO:0090068,GO:0090085,GO:0090263,GO:0090304,GO:0090734,GO:0097159,GO:0097352,GO:0097367,GO:0098772,GO:0098796,GO:0098827,GO:0140030,GO:1900371,GO:1900373,GO:1900542,GO:1900544,GO:1901135,GO:1901137,GO:1901265,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901698,GO:1901800,GO:1901970,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902099,GO:1902101,GO:1902494,GO:1902680,GO:1903003,GO:1903004,GO:1903006,GO:1903007,GO:1903050,GO:1903052,GO:1903320,GO:1903322,GO:1903362,GO:1903364,GO:1903506,GO:1903508,GO:1903513,GO:1903578,GO:1903580,GO:1903715,GO:1903862,GO:1904288,GO:1904949,GO:1905368,GO:1905369,GO:1905818,GO:1905820,GO:1990381,GO:1990730,GO:2000058,GO:2000060,GO:2000112,GO:2000116,GO:2000142,GO:2000144,GO:2000152,GO:2000158,GO:2001056,GO:2001141,GO:2001169,GO:2001171,GO:2001252
EggNOG free text desc.proteasome-activating ATPase activity
EggNOG OGsCOG1222@1,KOG0727@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03051
Hectar predicted targeting categoryother localisation
Exons4
Model size747
Cds size747
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12575.2161.1prot_H-canaliculatus_F_contig12575.2161.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig12575 5..2868 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928972.1778438-CDS-H-canaliculatus_F_contig12575:4..1961622928972.1778438-CDS-H-canaliculatus_F_contig12575:4..196Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12575 5..196 -
1696845635.4147005-CDS-H-canaliculatus_F_contig12575:4..1961696845635.4147005-CDS-H-canaliculatus_F_contig12575:4..196Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12575 5..196 -
1622928972.190331-CDS-H-canaliculatus_F_contig12575:1003..11531622928972.190331-CDS-H-canaliculatus_F_contig12575:1003..1153Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12575 1004..1153 -
1696845635.4333968-CDS-H-canaliculatus_F_contig12575:1003..11531696845635.4333968-CDS-H-canaliculatus_F_contig12575:1003..1153Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12575 1004..1153 -
1622928972.199254-CDS-H-canaliculatus_F_contig12575:1904..21321622928972.199254-CDS-H-canaliculatus_F_contig12575:1904..2132Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12575 1905..2132 -
1696845635.4419065-CDS-H-canaliculatus_F_contig12575:1904..21321696845635.4419065-CDS-H-canaliculatus_F_contig12575:1904..2132Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12575 1905..2132 -
1622928972.2091398-CDS-H-canaliculatus_F_contig12575:2691..28681622928972.2091398-CDS-H-canaliculatus_F_contig12575:2691..2868Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12575 2692..2868 -
1696845635.4515984-CDS-H-canaliculatus_F_contig12575:2691..28681696845635.4515984-CDS-H-canaliculatus_F_contig12575:2691..2868Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12575 2692..2868 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig12575.2161.1

>prot_H-canaliculatus_F_contig12575.2161.1 ID=prot_H-canaliculatus_F_contig12575.2161.1|Name=mRNA_H-canaliculatus_F_contig12575.2161.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=249bp
VSSRQVKEAVELPLTHFELYKQIGIDPPRGVLMYGPPGTGKTMMAKAVAN
ATSASFISVVGSEFVQKYLGEGPRMVRDVFRLARENSPSVVFIDEIDAIA
TKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRADTLDPAL
LRPGRLDRKIEFPVPDRRQKRMVFTACTSKMNLSEEVDLEDYVNRPEKIS
SADISAIAQEAGLQAVRENRYVVLGKDLDKAYKKHVNKHDTEHAFYSR*
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mRNA from alignment at H-canaliculatus_F_contig12575:5..2868-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig12575.2161.1 ID=mRNA_H-canaliculatus_F_contig12575.2161.1|Name=mRNA_H-canaliculatus_F_contig12575.2161.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2864bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12575:5..2868- (Hapterophycus canaliculatus Oshoro5f female)
GTCTCGTCTCGCCAGGTGAAGGAGGCGGTTGAGCTCCCGCTGACGCACTT
CGAGCTTTACAAACAGATCGGCATCGACCCTCCCAGAGGCGTTCTCATGT
ACGGTCCCCCGGGGACCGGGAAGACCATGATGGCGAAGGCGGTAGCAAAC
GCAACGAGCGCTTCGTTCATCAGCGTGGTGAGTGCTGAAAATCACCATAC
ACACATCATCGTACGATACATCACGATACAGTACATCATCGGAAGCGCTT
GATCGCTTAATGGACGTCGTGGTCGTCCCGTCCAGACTGTAGAAACCTTC
CGACCTTCGACGCTGCGATTCTTACCACCTTCGCGTGAAAGTCAGAAAAA
TCAAAGAAAAATGGAAGGGTGCTGTTGTGGCTTGAATAGGGCGGCGTTCG
TGGGAGTGGCACACGCGGAAAGTCGTGCCGGGCAAGCTATGGTGACCAGG
GCAACATTCGTAGAAAGGCCGCCTGTGTTGTCACTTTTTTTTAAAGGAGT
TTGTGCGTTGCTGACGTCGAAGCCTCGTCCCGTTGTCTACTACGACGTAA
CGAGGTTCACCACTCGAACGAGCAGGAGAAACAAACACCGGTGACGGCTG
TATGGACCCGGTTTCTTGCCCATTGAAGCACATGTTTTTGTGGATGTGAC
TCGCGAAATACACGAGAGCGTGCAGACGAACGCCCACCGATTCCTGCCGT
CGAAACACGCCGAACGAATGAATCCCGCGTCCGCAGGTGGGGTCGGAGTT
CGTGCAGAAGTACCTCGGCGAGGGGCCCCGCATGGTCAGGGACGTGTTCC
GCCTGGCGAGGGAAAACTCCCCCTCCGTGGTGTTCATCGACGAGATCGAC
GCCATCGCGACCAAGAGATTCGACGCGCAGACAGGGGCCGACCGCGAGGT
GCAGCGGATCCTGCTAGAGCTGCTCAACCAGATGGACGGCTTCGACCAGA
GCACCAACGTCAAGGTGAACGAAAACGAGAACGAGCAGGGGACGTGGAGA
TGAAGAGAAGACTTCAAGGGTGGCTGTGCCAAACTTCCAAGTAGCCCGTC
TGCCTTGGGCTCATCGCCGGATACCTCGACCCGTGTACTTGTACGGAAAA
GCTGACACACCAAAGATCTTCCTGGAAGGACCAAGGGAGCAGGAGGCCTC
GTCGTTTAATTACTTCTGCGTATTTCATGACGTTTTTGCCCTAAACCTCA
AGTGTTCAAGTGTTAAACCTTAAGCTAAGTGTGAGGCTTTCCTTCCTTGC
GCGATCTGTTCTTCGGGTACGATCAGGGTCAGGGTCAGGGTCGGGATCCT
CTTTGTTTCGTGTCTCGCACCTGTGCGACGCTTCACCTTCACGTGGTCGC
GCTCCAAACAAGCAGCGACGCCAGTATTAGCTCGAACACATGCTCAAGAG
CCCTGACAGGGCTGCGTTTGGAGTGCGAGCAGCGCGGCAAGCTCTAATTA
TTTTTTTACGTAGACGGTAATGCTTGGCCATCAACAGTCACAAGGAAAGA
ACGCTCCCCTCCGCCGGGCCGTTGTGGTCGGTCGATGACCTGTGACTGCA
ACGGCCGGCTCCACCTCCTCCTCCTCTTTTTTTGTTGCCTGGTGGGGAGC
ATTAGTGAAGTGCAACTTGTCAAGTTGTTGTTGTGTCTGACGCTTTGCCC
CCCGATGGCCTGCACTGCACTCCACGTTCGCCCTGCCTGATACCCTCGCT
TGTGCCGGTGGGCAGGTCATCATGGCGACGAACCGCGCAGACACGCTAGA
CCCCGCGCTACTGCGACCGGGTAGGCTGGACCGGAAGATAGAGTTTCCCG
TGCCAGACCGACGGCAAAAGCGGATGGTCTTCACGGCATGCACGTCCAAG
ATGAACCTCAGCGAGGTGGGTGGACCGCGGCGCCTGCGTCTGGCGTGGCG
GCATCGGGGAGGCGGAGAGGGAGGGGGGGTACCCTTGTACCCTTGTACCC
TTTGGTGGAAGAGTGGCCACCCACGCCGGTTGTGTTTTCGTGCCGCGCCT
TCCCGGGAATCGATTTGACTTGCTCGGCCCAAGGAATTTTGCAACTGGTT
CCAAAACCCGCGCCTGCGGTATTCAGCGATGGAGGTGGCTGACTCGCATG
GCGCACAGAGGGTTTAGACTTGACAGGCGTTTATATATCGTGGCACGCCG
GGGATAGGGTGCCCGAGGTCCGCCTCTGGTCGGTTTCGCTTTTTATGCGG
TCGATTTGACCCGTGTCAGATTTGTCACATAAGTGCAACAAGGTTCCTGT
GCGCCTCATAGCACACAGAGGGTTAAGACTTGAAAGGCGTGTATATCTCG
TGACACGTCTGGGAGAGGGTGCCCGAGGTCCGCCTCTGGTCGGTTTCGCT
TTTCAAGCGGTCGATTTGAACCGTGTCAGATTTGATCCACGTCAGAGAGG
TTCCTATGCGCCTCACGGAGCATCGAGGCTTTGGACTTGACAGGCGTTTA
CGTATCGTGGCACGCCGGGGATAGGGTGCCCGATGTCCGCCTCAAGTCGG
TTTCGCTTTTCATGTCGTCGATTTAACCCACGTCAGTGAGGGTCCTGTAC
GCTTCATAGAGCAAGTACAAAACTTCTTCTCTCCTCATGAAGTCGTACGT
GTTCGTGCTCAGCATACCCCCCCCTCCCACCTCCCGGGCCTGCACTTGCA
TGATCGTGCTCCATTCGAGCAGGAAGTGGACCTGGAGGACTACGTCAACA
GGCCGGAGAAGATCAGCTCGGCCGATATCTCCGCCATCGCGCAAGAGGCC
GGCCTCCAGGCGGTGCGTGAAAACCGGTACGTGGTGCTGGGCAAGGACTT
GGACAAGGCGTACAAGAAGCACGTTAACAAGCACGACACGGAGCACGCTT
TCTACTCCAGGTAA
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig12575:5..2868-

>mRNA_H-canaliculatus_F_contig12575.2161.1 ID=mRNA_H-canaliculatus_F_contig12575.2161.1|Name=mRNA_H-canaliculatus_F_contig12575.2161.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1494bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12575:5..2868- (Hapterophycus canaliculatus Oshoro5f female)
GTCTCGTCTCGCCAGGTGAAGGAGGCGGTTGAGCTCCCGCTGACGCACTT
CGAGCTTTACAAACAGATCGGCATCGACCCTCCCAGAGGCGTTCTCATGT
ACGGTCCCCCGGGGACCGGGAAGACCATGATGGCGAAGGCGGTAGCAAAC
GCAACGAGCGCTTCGTTCATCAGCGTGGTCTCGTCTCGCCAGGTGAAGGA
GGCGGTTGAGCTCCCGCTGACGCACTTCGAGCTTTACAAACAGATCGGCA
TCGACCCTCCCAGAGGCGTTCTCATGTACGGTCCCCCGGGGACCGGGAAG
ACCATGATGGCGAAGGCGGTAGCAAACGCAACGAGCGCTTCGTTCATCAG
CGTGGTGGGGTCGGAGTTCGTGCAGAAGTACCTCGGCGAGGGGCCCCGCA
TGGTCAGGGACGTGTTCCGCCTGGCGAGGGAAAACTCCCCCTCCGTGGTG
TTCATCGACGAGATCGACGCCATCGCGACCAAGAGATTCGACGCGCAGAC
AGGGGCCGACCGCGAGGTGCAGCGGATCCTGCTAGAGCTGCTCAACCAGA
TGGACGGCTTCGACCAGAGCACCAACGTCAAGGTGGGGTCGGAGTTCGTG
CAGAAGTACCTCGGCGAGGGGCCCCGCATGGTCAGGGACGTGTTCCGCCT
GGCGAGGGAAAACTCCCCCTCCGTGGTGTTCATCGACGAGATCGACGCCA
TCGCGACCAAGAGATTCGACGCGCAGACAGGGGCCGACCGCGAGGTGCAG
CGGATCCTGCTAGAGCTGCTCAACCAGATGGACGGCTTCGACCAGAGCAC
CAACGTCAAGGTCATCATGGCGACGAACCGCGCAGACACGCTAGACCCCG
CGCTACTGCGACCGGGTAGGCTGGACCGGAAGATAGAGTTTCCCGTGCCA
GACCGACGGCAAAAGCGGATGGTCTTCACGGCATGCACGTCCAAGATGAA
CCTCAGCGAGGTCATCATGGCGACGAACCGCGCAGACACGCTAGACCCCG
CGCTACTGCGACCGGGTAGGCTGGACCGGAAGATAGAGTTTCCCGTGCCA
GACCGACGGCAAAAGCGGATGGTCTTCACGGCATGCACGTCCAAGATGAA
CCTCAGCGAGGAAGTGGACCTGGAGGACTACGTCAACAGGCCGGAGAAGA
TCAGCTCGGCCGATATCTCCGCCATCGCGCAAGAGGCCGGCCTCCAGGCG
GTGCGTGAAAACCGGTACGTGGTGCTGGGCAAGGACTTGGACAAGGCGTA
CAAGAAGCACGTTAACAAGCACGACACGGAGCACGCTTTCTACTCCAGGT
AAGAAGTGGACCTGGAGGACTACGTCAACAGGCCGGAGAAGATCAGCTCG
GCCGATATCTCCGCCATCGCGCAAGAGGCCGGCCTCCAGGCGGTGCGTGA
AAACCGGTACGTGGTGCTGGGCAAGGACTTGGACAAGGCGTACAAGAAGC
ACGTTAACAAGCACGACACGGAGCACGCTTTCTACTCCAGGTAA
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