prot_H-canaliculatus_F_contig10.21.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig10.21.1
Unique Nameprot_H-canaliculatus_F_contig10.21.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length782
Homology
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BLAST of mRNA_H-canaliculatus_F_contig10.21.1 vs. uniprot
Match: A0A6H5JZN1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZN1_9PHAE)

HSP 1 Score: 302 bits (774), Expect = 9.220e-91
Identity = 251/414 (60.63%), Postives = 281/414 (67.87%), Query Frame = 0 
Query:  383 LALEGGGLPMSTTLYNFAIXXXXXXXXXXXXXXXXERMKNNPATPPDARTYSCLINACAKDANLEDALAYLTEMRAVGLAPTIFAYVSAMNAAKMANCWRXXXXXXXXXXXXXXXXXXXSFNNVVDAFGKDGQLARSLVQPHVDGDVQGSGNGRQEAAVPSNEVGSHVDPNAWQLEESSQLVKRMENNGIRPDVMSFNVLIDACAR-------------------GGRHWNASXXXXXXXXXXXXXXXXXXXXXXXXCRAATGDEWQIALDXXXXXXXXXXXXXXXXXXXXXGACVKAGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIRADPTLEPNQRTYTAVINCFQQFQGGQAVASLASTLAEFSSREEILLNPMPTSDVYLGSSLYPVEDGD 777
            LA  G G+PMSTT+YNF I                ERMK+NPATPPDA+TY+ LI+ACAKDANLEDALAYLTEMRAVGLAPT FAY+SAM+A K+A  W+                   SF NVVDA+GKDGQLAR+LVQ +         N  + AA   NE+ S  D NAW+ EE  +LVKRMENNG+  DVMSFN+LIDACAR                   GG HW A+                        CR  T +EW++ALD XXXXXXXXXXXXXXXXXXXX    KAGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK+RADPTLE NQRTYT+ INCFQQFQGGQ+VASLASTLA  SSREE+LL+P+PTSDVYLG S    E G+
Sbjct:   77 LAQRGEGVPMSTTMYNFGIDAGVALL---------ERMKSNPATPPDAQTYAYLIDACAKDANLEDALAYLTEMRAVGLAPTFFAYISAMSAIKVAGQWKEALSLLDEMAKGRLISDVFSFYNVVDAYGKDGQLARTLVQTNA--------NPTEIAADSENEMRSDADLNAWRAEEPDELVKRMENNGVELDVMSFNILIDACARYTAHRVPLPLPMSHVPFRKGGSHWAAARLLKKMKSLGLRPNSLSYNPIIHSCRGGTDEEWRLALDLXXXXXXXXXXXXXXXXXXXXXXXAKAGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVRADPTLEANQRTYTSAINCFQQFQGGQSVASLASTLAGQSSREEMLLDPIPTSDVYLGGSSGTPEGGE 473
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BLAST of mRNA_H-canaliculatus_F_contig10.21.1 vs. uniprot
Match: D7G0G1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0G1_ECTSI)

HSP 1 Score: 292 bits (747), Expect = 8.020e-85
Identity = 484/653 (74.12%), Postives = 521/653 (79.79%), Query Frame = 0 
Query:  125 FRKKVRVKKKSKRTMRSLRYNAFIRSAKELGPRGQWREVLRLLDKLAEDGIPLNSYTYNSAMSSIAKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEVLALEGGGLPMSTTLYNFAIXXXXXXXXXXXXXXXXERMKNNPATPPDARTYSCLINACAKDANLEDALAYLTEMRAVGLAPTIFAYVSAMNAAKMANCWRXXXXXXXXXXXXXXXXXXXSFNNVVDAFGKDGQLARSLVQPHVDGDVQGSGNGRQEAAVPSNEVGSHVDPNAWQLEESSQLVKRMENNGIRPDVMSFNVLIDACARGGRHWNASXXXXXXXXXXXXXXXXXXXXXXXXCRAATGDEWQIALDXXXXXXXXXXXXXXXXXXXXXGACVKAGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIRADPTLEPNQRTYTAVINCFQQFQGGQAVASLASTLAEFSSREEILLNPMPTSDVYLGSSLYPVEDGD 777
            FR+K+RV+K SKR  R+ R+N+FI +AK  G RGQWREVLRLLDK+AEDGIPLNSY YNSA+SSIAK+XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   LAL G G+PMSTT+YNF IXXXXXXXXXXXXXXXX RMK+NPATPPDA+T                       MRAVGLAPT FAY+SAM+A K+A  W+                   SF NVVDA+GKDGQLAR+LVQ         S N  + AA   NE+ S  D NAW+ E+  +LVKRMENNG+  DVMSFN+LIDACARGG HW A+                        CR  T +EW++ALD XXXXXXXXXXXXXXXXXXXX    KAGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK+RADPTLE NQRTYT+ INCFQQFQGGQ+VASLASTLA  SSREE+LLNP+PTSDVYLG S    E G+
Sbjct:    4 FRRKIRVRKVSKRIARTTRHNSFISTAKVRGARGQWREVLRLLDKMAEDGIPLNSYAYNSALSSIAKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALALGGEGVPMSTTMYNFGIXXXXXXXXXXXXXXXXXRMKSNPATPPDAQTXXXXXXXXXXXXXXXXXXXXXXXMRAVGLAPTFFAYISAMSAIKVAGQWKEALSLLDEMAKGRLISDVFSFYNVVDAYGKDGQLARTLVQT--------SANPTEIAADSENEMRSDADLNAWRAEDPDELVKRMENNGVELDVMSFNILIDACARGGSHWAAARLLTKMKSLGLRPNSLSYNPIIHSCRGGTDEEWRLALDLXXXXXXXXXXXXXXXXXXXXXXXAKAGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVRADPTLEANQRTYTSAINCFQQFQGGQSVASLASTLAGQSSREEMLLNPIPTSDVYLGGSPGTPEGGE 648
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10.21.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JZN1_9PHAE9.220e-9160.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0G1_ECTSI8.020e-8574.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 467..495
e-value: 0.67
score: 10.3
coord: 358..381
e-value: 0.44
score: 10.9
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 320..354
e-value: 1.3E-7
score: 29.4
coord: 432..464
e-value: 2.4E-6
score: 25.3
coord: 650..683
e-value: 6.9E-7
score: 27.1
coord: 180..213
e-value: 4.7E-6
score: 24.4
coord: 397..422
e-value: 0.0019
score: 16.2
coord: 285..319
e-value: 7.3E-8
score: 30.1
coord: 250..283
e-value: 7.8E-6
score: 23.8
coord: 215..249
e-value: 1.9E-7
score: 28.9
coord: 578..611
e-value: 7.2E-5
score: 20.7
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 563..621
e-value: 1.8E-13
score: 50.3
coord: 635..694
e-value: 2.2E-11
score: 43.6
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 394..442
e-value: 4.8E-8
score: 33.1
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 213..247
score: 11.542
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 538..574
score: 5.174
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 248..282
score: 11.509
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 318..352
score: 12.299
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 647..681
score: 11.279
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 610..646
score: 10.687
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 283..317
score: 11.674
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 464..498
score: 8.78
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 575..609
score: 11.948
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 429..463
score: 11.444
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 178..212
score: 11.4
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 393..427
score: 10.161
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 682..712
score: 8.703
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 353..387
score: 7.64
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 140..177
score: 6.226
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 553..623
e-value: 7.0E-18
score: 66.6
coord: 113..265
e-value: 7.1E-30
score: 105.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 624..753
e-value: 4.7E-29
score: 103.7
coord: 266..386
e-value: 8.6E-35
score: 122.5
coord: 387..526
e-value: 2.0E-30
score: 108.2
IPR033443Pentacotripeptide-repeat region of PRORPPFAMPF17177PPR_longcoord: 182..335
e-value: 1.0E-15
score: 57.7
NoneNo IPR availablePANTHERPTHR46128FAMILY NOT NAMEDcoord: 361..518
coord: 627..729
coord: 135..354
coord: 557..621
coord: 248..381

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig10contigH-canaliculatus_F_contig10:83758..91497 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig10.21.1mRNA_H-canaliculatus_F_contig10.21.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig10 82725..91580 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig10.21.1 ID=prot_H-canaliculatus_F_contig10.21.1|Name=mRNA_H-canaliculatus_F_contig10.21.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=782bp
MSRVSCEPLFMHRLELRAGVMEPSPGPCARGSTSATCLAFASSPHKLRGL
VVGSELKTWQRHHRRGRVACCSGAGLRGEGTGHDGGSSVDGIDGQNQAEA
KPPLPPLGWTARMGNTSRKLKQVNFRKKVRVKKKSKRTMRSLRYNAFIRS
AKELGPRGQWREVLRLLDKLAEDGIPLNSYTYNSAMSSIAKTGRWREALG
LRDRMLAEGIKLDGYSFNALIEACSKGGQVKKGLELLREMVDAGVPRDCF
SYNAALHGFVQFGDSENALKMLRDMVADGVRPDLVSYSTALACCGKGGEW
ERCMRLMDKMRSEGIAPNVYSFSSLINACGKAGRWALAVKTLEDMEASGL
RPNEHNWLTTIGACGNAGRWQEALQLIDKLEVLALEGGGLPMSTTLYNFA
IDACARAGRWDQGVLLLERMKNNPATPPDARTYSCLINACAKDANLEDAL
AYLTEMRAVGLAPTIFAYVSAMNAAKMANCWREALSLLDEMAETGLIPDV
LSFNNVVDAFGKDGQLARSLVQPHVDGDVQGSGNGRQEAAVPSNEVGSHV
DPNAWQLEESSQLVKRMENNGIRPDVMSFNVLIDACARGGRHWNASKLLE
KMKSCGLRPNAVSYNSIIHTCRAATGDEWQIALDLLDNMRRSGLTPDAFA
FNTAIGACVKAGDWRRALDLLAGMKVEGIAPDILSYNSVISACAKGGQWR
IGLELLAKIRADPTLEPNQRTYTAVINCFQQFQGGQAVASLASTLAEFSS
REEILLNPMPTSDVYLGSSLYPVEDGDAEEG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033443PPR_long
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat