mRNA_H-canaliculatus_F_contig12522.2136.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig12522.2136.1 vs. uniprot
Match: D7FY86_ECTSI (Meiotic recombination protein DMC1/LIM15 homolog, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY86_ECTSI) HSP 1 Score: 274 bits (700), Expect = 3.200e-91 Identity = 135/151 (89.40%), Postives = 148/151 (98.01%), Query Frame = 1
Query: 1 QRLLTIRGFSEATVTKIQVAASKVDTSGSSGVFQTGLQCREARQKVIKVHTGAKQLDALLGGGIETGSITEFFGEFRSGKTQLMHTLCVTSQLSRESGGAEGRVVYMDTEGNFRPERIEAIAERFGLDPAETLENIIVTRVFNHEQQIERA 453
+RLLTIRGFS+ATV KIQ+AA+KVDTSGSSG+F+TGLQCR+AR+KVIKVHTG+KQLDALLGGGIETGSITEFFGEFRSGKTQL HTLCVTSQLS+ESGGAEGRVVYMDTEGNFRPER+EAIAERFGLDP ETLEN+IVTRVFNHEQQI+RA
Sbjct: 65 KRLLTIRGFSDATVAKIQLAAAKVDTSGSSGMFKTGLQCRQAREKVIKVHTGSKQLDALLGGGIETGSITEFFGEFRSGKTQLCHTLCVTSQLSKESGGAEGRVVYMDTEGNFRPERVEAIAERFGLDPTETLENVIVTRVFNHEQQIDRA 215
BLAST of mRNA_H-canaliculatus_F_contig12522.2136.1 vs. uniprot
Match: A0A482S2G5_9ARCH (RECA_2 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S2G5_9ARCH) HSP 1 Score: 187 bits (474), Expect = 3.620e-58 Identity = 91/148 (61.49%), Postives = 120/148 (81.08%), Query Frame = 1
Query: 1 QRLLTIRGFSEATVTKIQVAASKVDTSGSSGVFQTGLQCREARQKVIKVHTGAKQLDALLGGGIETGSITEFFGEFRSGKTQLMHTLCVTSQLSRESGGAEGRVVYMDTEGNFRPERIEAIAERFGLDPAETLENIIVTRVFNHEQQI 444
+ LLTI+G +EA V KI+ AA K+D G+ +F+TG++ +E R+ ++ + TGA LD +LGGGIET SITE FGEFR+GKTQL HTLCVT+QLS + G +G+V+Y+DTEGNFRPERIE+IAERFGLD +TL+NIIV RVF+HE+Q+
Sbjct: 12 RELLTIKGITEARVEKIKEAAKKLDLRGN--MFKTGVEVKEKRKSIVHITTGATSLDKILGGGIETSSITELFGEFRTGKTQLSHTLCVTTQLSFDMHGGQGKVIYLDTEGNFRPERIESIAERFGLDAEQTLDNIIVCRVFSHEEQM 157
BLAST of mRNA_H-canaliculatus_F_contig12522.2136.1 vs. uniprot
Match: W7TD93_9STRA (Dna repair protein DMC1 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TD93_9STRA) HSP 1 Score: 172 bits (437), Expect = 1.210e-51 Identity = 87/140 (62.14%), Postives = 109/140 (77.86%), Query Frame = 1
Query: 7 LLTIRGFSEATVTKIQVAASKVDTSGSSGVFQTGLQCREARQKVIKVHTGAKQLDALLGGGIETGSITEFFGEFRSGKTQLMHTLCVTSQLSRESGGAEGRVVYMDTEGNFRPERIEAIAERFGLDPAETLENIIVTRVF 426
LL I+GFSEA V KI+ +A K+ T G+S F+TG + RE R++ IK+ TGAK DA+LGGG+E+GSITE +GEFR+GKTQL HTL VT QL + GG +G+ +Y+DTEGNFRPERIE IAERFGLD TL+NIIV R +
Sbjct: 45 LLAIKGFSEAKVEKIRSSARKL-TGGTSHPFRTGTEVREQRKRCIKITTGAKTFDAILGGGVESGSITEAYGEFRTGKTQLSHTLAVTCQLGFDQGGGQGKCIYLDTEGNFRPERIEKIAERFGLDADATLDNIIVARAY 183
BLAST of mRNA_H-canaliculatus_F_contig12522.2136.1 vs. uniprot
Match: A0A4D9CQI8_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CQI8_9STRA) HSP 1 Score: 176 bits (446), Expect = 1.580e-51 Identity = 89/147 (60.54%), Postives = 113/147 (76.87%), Query Frame = 1
Query: 7 LLTIRGFSEATVTKIQVAASKVDTSGSSGVFQTGLQCREARQKVIKVHTGAKQLDALLGGGIETGSITEFFGEFRSGKTQLMHTLCVTSQLSRESGGAEGRVVYMDTEGNFRPERIEAIAERFGLDPAETLENIIVTRVFNHEQQIE 447
LL I+GFSEA V KI+ +A K+ T G+S F+TG + RE R++ IK+ TGAK DA+LGGG+E+GSITE +GEFR+GKTQL HTL VT QL + GG +G+ +Y+DTEGNFRPERIE IA+RFGLD TL+NIIV R + +QQ E
Sbjct: 68 LLAIKGFSEAKVEKIRSSARKL-TGGTSHPFRTGTEVREQRKRCIKITTGAKTFDAILGGGVESGSITEAYGEFRTGKTQLSHTLAVTCQLGFDQGGGQGKCIYLDTEGNFRPERIEKIADRFGLDADATLDNIIVARAYASDQQCE 213
BLAST of mRNA_H-canaliculatus_F_contig12522.2136.1 vs. uniprot
Match: A0A1J4KIK7_9EUKA (Meiotic recombination protein DMC1 like protein n=1 Tax=Tritrichomonas foetus TaxID=1144522 RepID=A0A1J4KIK7_9EUKA) HSP 1 Score: 172 bits (437), Expect = 2.610e-50 Identity = 88/149 (59.06%), Postives = 109/149 (73.15%), Query Frame = 1
Query: 1 QRLLTIRGFSEATVTKIQVAASKVDTSGSSGVFQTGLQCREARQKVIKVHTGAKQLDALLGGGIETGSITEFFGEFRSGKTQLMHTLCVTSQLSRESGGAEGRVVYMDTEGNFRPERIEAIAERFGLDPAETLENIIVTRVFNHEQQIE 447
+RL ++G S+A V KI AA+ +DTS S F +G +C RQ+VI + TG+ +LD LLGGGIE+ SITE FGEFR+GKTQL HTLCVTSQL GG G+VVY+DTEG FRPERI IA RFG+DP E L+NI+ R F HEQQ++
Sbjct: 56 KRLANVKGISDAKVDKIIAAATSLDTSFS---FMSGNECLNRRQRVIHITTGSSELDKLLGGGIESMSITEVFGEFRTGKTQLCHTLCVTSQLPINQGGGAGKVVYIDTEGTFRPERIPTIAARFGVDPNEVLDNILYARAFTHEQQMQ 201
BLAST of mRNA_H-canaliculatus_F_contig12522.2136.1 vs. uniprot
Match: A0A835YPZ9_9STRA (DMC1-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPZ9_9STRA) HSP 1 Score: 170 bits (430), Expect = 3.760e-49 Identity = 86/144 (59.72%), Postives = 109/144 (75.69%), Query Frame = 1
Query: 16 IRGFSEATVTKIQVAASKVDTSGSSGVFQTGLQCREARQKVIKVHTGAKQLDALLGGGIETGSITEFFGEFRSGKTQLMHTLCVTSQLSRESGGAEGRVVYMDTEGNFRPERIEAIAERFGLDPAETLENIIVTRVFNHEQQIE 447
IRGFSE V KI A KVD +F++G++ R+ R+ VIK+ TG+ LD +LGGG+ETGSITEF+GEFR+GKTQ+MHTL VT+QL +SGG GRVV++DTE NFRPERIE IAERFG+D E LENI + +HEQQ++
Sbjct: 69 IRGFSETKVAKILETARKVDPRAGI-IFRSGIEARDERRNVIKITTGSAGLDGILGGGVETGSITEFYGEFRTGKTQMMHTLAVTAQLDIQSGGGAGRVVFIDTENNFRPERIENIAERFGIDGNEVLENIFHCQPQSHEQQMD 211
BLAST of mRNA_H-canaliculatus_F_contig12522.2136.1 vs. uniprot
Match: B6K203_SCHJY (RecA family ATPase Dmc1 n=1 Tax=Schizosaccharomyces japonicus (strain yFS275 / FY16936) TaxID=402676 RepID=B6K203_SCHJY) HSP 1 Score: 168 bits (425), Expect = 1.640e-48 Identity = 83/147 (56.46%), Postives = 113/147 (76.87%), Query Frame = 1
Query: 7 LLTIRGFSEATVTKIQVAASKVDTSGSSGVFQTGLQCREARQKVIKVHTGAKQLDALLGGGIETGSITEFFGEFRSGKTQLMHTLCVTSQLSRESGGAEGRVVYMDTEGNFRPERIEAIAERFGLDPAETLENIIVTRVFNHEQQIE 447
LL I+GFSEA V K++ AASK+ + F T ++ ++R++V + TG+K DA+LGGG+++ SITE FGEFR GKTQ+ HTLCVT+QL RE GGAEG+V ++DTEG FRP+RI AIAERFG+D + +ENIIV+R +N EQQ++
Sbjct: 57 LLKIKGFSEAKVDKLKEAASKLCPAN----FATAMEISQSRKRVWSISTGSKAFDAMLGGGVQSMSITEVFGEFRCGKTQMSHTLCVTAQLPREMGGAEGKVAFIDTEGTFRPDRIRAIAERFGVDADQAMENIIVSRAYNSEQQMD 199
BLAST of mRNA_H-canaliculatus_F_contig12522.2136.1 vs. uniprot
Match: A0A8H7SE14_9FUNG (Uncharacterized protein n=1 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7SE14_9FUNG) HSP 1 Score: 166 bits (421), Expect = 8.980e-48 Identity = 86/149 (57.72%), Postives = 106/149 (71.14%), Query Frame = 1
Query: 1 QRLLTIRGFSEATVTKIQVAASKVDTSGSSGVFQTGLQCREARQKVIKVHTGAKQLDALLGGGIETGSITEFFGEFRSGKTQLMHTLCVTSQLSRESGGAEGRVVYMDTEGNFRPERIEAIAERFGLDPAETLENIIVTRVFNHEQQIE 447
+ LL I+G SE V KI+ AASK G F TG + RQKV+K+ TG+KQ DALLGGGI+T SITE FGE+R+GKTQL HT+CV QLS E GGA +V Y+DTEG FRP+RI +IAERFG DP L+NIIV R +N + Q++
Sbjct: 66 KNLLKIKGLSETKVDKIKDAASKTQGCG----FMTGSELAHHRQKVVKISTGSKQFDALLGGGIQTMSITEVFGEYRTGKTQLAHTMCVQVQLSAEHGGASSKVAYIDTEGTFRPDRIRSIAERFGADPEVVLDNIIVARAWNSDHQMD 210
BLAST of mRNA_H-canaliculatus_F_contig12522.2136.1 vs. uniprot
Match: DMC1_SCHPO (Meiotic recombination protein dmc1 n=3 Tax=Schizosaccharomyces TaxID=4895 RepID=DMC1_SCHPO) HSP 1 Score: 166 bits (419), Expect = 1.180e-47 Identity = 83/147 (56.46%), Postives = 113/147 (76.87%), Query Frame = 1
Query: 7 LLTIRGFSEATVTKIQVAASKVDTSGSSGVFQTGLQCREARQKVIKVHTGAKQLDALLGGGIETGSITEFFGEFRSGKTQLMHTLCVTSQLSRESGGAEGRVVYMDTEGNFRPERIEAIAERFGLDPAETLENIIVTRVFNHEQQIE 447
LL I+GFSEA V K++ AASK+ + F T ++ + R+KV + TG++ L+ +LGGGI++ SITE FGEFR GKTQ+ HTLCVT+QL R+ GGAEG+V ++DTEG FRP+RI+AIAERFG+D + +ENIIV+R +N EQQ+E
Sbjct: 53 LLKIKGFSEAKVDKLKEAASKMCPAN----FSTAMEISQNRKKVWSISTGSEALNGILGGGIQSMSITEVFGEFRCGKTQMSHTLCVTAQLPRDMGGAEGKVAFIDTEGTFRPDRIKAIAERFGVDADQAMENIIVSRAYNSEQQME 195
BLAST of mRNA_H-canaliculatus_F_contig12522.2136.1 vs. uniprot
Match: A0A8H3AWG1_9AGAM (Hypothetical protein n=1 Tax=Rhizoctonia solani TaxID=456999 RepID=A0A8H3AWG1_9AGAM) HSP 1 Score: 161 bits (407), Expect = 4.690e-47 Identity = 83/149 (55.70%), Postives = 110/149 (73.83%), Query Frame = 1
Query: 1 QRLLTIRGFSEATVTKIQVAASKVDTSGSSGVFQTGLQCREARQKVIKVHTGAKQLDALLGGGIETGSITEFFGEFRSGKTQLMHTLCVTSQLSRESGGAEGRVVYMDTEGNFRPERIEAIAERFGLDPAETLENIIVTRVFNHEQQIE 447
+ LL I+G SEA V KI+ AA K+ GSS FQTG+Q E R++V+++ +G+K +D +LGGG + SI+E +GEFR+GKTQL HTL V +QL E GGA G+V Y+DTEG FRP+RI AIA+RFG+DP +TLENI R +N E Q+E
Sbjct: 62 RNLLKIKGMSEAKVEKIKEAAQKI--LGSS--FQTGIQVSEKRKRVLQISSGSKSVDGMLGGGFMSQSISEVYGEFRTGKTQLAHTLSVIAQLPPEMGGASGKVTYIDTEGTFRPDRIRAIADRFGVDPEQTLENITYARAYNSEHQME 206 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12522.2136.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig12522.2136.1 >prot_H-canaliculatus_F_contig12522.2136.1 ID=prot_H-canaliculatus_F_contig12522.2136.1|Name=mRNA_H-canaliculatus_F_contig12522.2136.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=151bp QRLLTIRGFSEATVTKIQVAASKVDTSGSSGVFQTGLQCREARQKVIKVHback to top mRNA from alignment at H-canaliculatus_F_contig12522:749..3321- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig12522.2136.1 ID=mRNA_H-canaliculatus_F_contig12522.2136.1|Name=mRNA_H-canaliculatus_F_contig12522.2136.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2573bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12522:749..3321- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig12522:749..3321- >mRNA_H-canaliculatus_F_contig12522.2136.1 ID=mRNA_H-canaliculatus_F_contig12522.2136.1|Name=mRNA_H-canaliculatus_F_contig12522.2136.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=906bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12522:749..3321- (Hapterophycus canaliculatus Oshoro5f female)back to top |