prot_H-canaliculatus_F_contig1251.2131.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1251.2131.1
Unique Nameprot_H-canaliculatus_F_contig1251.2131.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length190
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1251.2131.1 vs. uniprot
Match: A0A6H5K5L6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5L6_9PHAE)

HSP 1 Score: 145 bits (367), Expect = 9.080e-39
Identity = 88/163 (53.99%), Postives = 107/163 (65.64%), Query Frame = 0 
Query:   16 RRDRRHESSCISGTVVPAVESIHFEGHLLHRVCGVTGKFPVLGDGDSGTNGCVADSNDSEESSLLEDSGENQLTRLRRNPRMMGIISKLKALSTPLSGVDDRGTDPGSSNPNEKQHLHQDRKVQVALGGRRIEAKRLAQQEYLRLFEEMLGELLKIQREKSKA 178
            RR R   S+    T VP  E+IHFEGHLLHR+C VTGKFP  G  D+G+ G      +  E SLLEDSGE+QL RLRRNP++  +IS+LK+LST L  +  RG   GSS  +E         V+ A+ G R    RLAQQEYLRLFEEML ELL++QREK+KA
Sbjct:  100 RRYRHGSSNAGDKTPVPTAENIHFEGHLLHRICEVTGKFPGGGSTDNGSEG------ERSEESLLEDSGEHQLARLRRNPKVKEVISRLKSLSTSLIAMSGRGMASGSSTGDEG--------VEYAVRGSRANTLRLAQQEYLRLFEEMLAELLRLQREKAKA 248
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1251.2131.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K5L6_9PHAE9.080e-3953.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1251contigH-canaliculatus_F_contig1251:24046..24615 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1251.2131.1mRNA_H-canaliculatus_F_contig1251.2131.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1251 23880..24994 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1251.2131.1 ID=prot_H-canaliculatus_F_contig1251.2131.1|Name=mRNA_H-canaliculatus_F_contig1251.2131.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=190bp
MMMGEKPDQYGQRRKRRDRRHESSCISGTVVPAVESIHFEGHLLHRVCGV
TGKFPVLGDGDSGTNGCVADSNDSEESSLLEDSGENQLTRLRRNPRMMGI
ISKLKALSTPLSGVDDRGTDPGSSNPNEKQHLHQDRKVQVALGGRRIEAK
RLAQQEYLRLFEEMLGELLKIQREKSKAGTSVPCISEVP*
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