mRNA_H-canaliculatus_F_contig12503.2125.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
|
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig12503.2125.1 vs. uniprot
Match: D7FR94_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR94_ECTSI) HSP 1 Score: 369 bits (947), Expect = 1.750e-128 Identity = 183/208 (87.98%), Postives = 187/208 (89.90%), Query Frame = 1
Query: 1 KNVPATPKLRDNSRVYFMTEGAQYMALDVGGGGLCALLGVIAVAMDAAGTPCEEIFAAVSGELTDDTKGYVQSLRANIVSTCGDQFAFKDGEELANFDDIVHDPMWVIVTRAMWELVTLQPTGYLDGRAVWLLAKFLGLHGFRIVKHEDGHLVPCDAGGPISSEECPMILHDGYGHFKALIPLRRMPLV--SLVLPFAPRRGFHGRHR 618
KNVPATPKL DNSRVYF TEGAQYMALDVGGGGLCALLGVIAVAMD GTPCEEIF A+SGELTD YVQSLRANIVSTCGDQFAFKDGEELA+FDDIVHDPMWVI TRAMWELVTL PTGYLDGRAVWLLAKFLGLHGFRIVKHEDGHLV CDAGGPISSEECPM+LHDGYGHFKALIPLRRMP V +PFA RR F GRHR
Sbjct: 2 KNVPATPKLCDNSRVYFTTEGAQYMALDVGGGGLCALLGVIAVAMDDVGTPCEEIFEAISGELTDVMTEYVQSLRANIVSTCGDQFAFKDGEELASFDDIVHDPMWVIATRAMWELVTLHPTGYLDGRAVWLLAKFLGLHGFRIVKHEDGHLVSCDAGGPISSEECPMMLHDGYGHFKALIPLRRMPGVPDKSRVPFASRREFRGRHR 209
BLAST of mRNA_H-canaliculatus_F_contig12503.2125.1 vs. uniprot
Match: A0A6H5JVJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVJ6_9PHAE) HSP 1 Score: 367 bits (941), Expect = 6.990e-126 Identity = 178/188 (94.68%), Postives = 182/188 (96.81%), Query Frame = 1
Query: 1 KNVPATPKLRDNSRVYFMTEGAQYMALDVGGGGLCALLGVIAVAMDAAGTPCEEIFAAVSGELTDDTKGYVQSLRANIVSTCGDQFAFKDGEELANFDDIVHDPMWVIVTRAMWELVTLQPTGYLDGRAVWLLAKFLGLHGFRIVKHEDGHLVPCDAGGPISSEECPMILHDGYGHFKALIPLRRMPL 564
KNVPATPKLRDNSRVYF TEGAQYMALDVGGGGLCALLGVIAVAMDAAGTPCEEIFAAVSGELTDD K +VQSLRANIVSTCGDQF FKDGEELA+FDDIVHDPMW+IVTRAMWELVTL PTGYLDGRAVWLLAKFLGLHGFRIVKHEDGHLVPCDAGGPISSEEC M+LHDGYGHFKALIPLRRMPL
Sbjct: 15 KNVPATPKLRDNSRVYFTTEGAQYMALDVGGGGLCALLGVIAVAMDAAGTPCEEIFAAVSGELTDDMKEHVQSLRANIVSTCGDQFTFKDGEELASFDDIVHDPMWLIVTRAMWELVTLHPTGYLDGRAVWLLAKFLGLHGFRIVKHEDGHLVPCDAGGPISSEECSMMLHDGYGHFKALIPLRRMPL 202
BLAST of mRNA_H-canaliculatus_F_contig12503.2125.1 vs. uniprot
Match: D8LK60_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK60_ECTSI) HSP 1 Score: 363 bits (931), Expect = 1.300e-119 Identity = 181/202 (89.60%), Postives = 185/202 (91.58%), Query Frame = 1
Query: 1 KNVPATPKLRDNSRVYFMTEGAQYMALDVGGGGLCALLGVIAVAMDAAGTPCEEIFAAVSGELTDDTKGYVQSLRANIVSTCGDQFAFKDGEELANFDDIVHDPMWVIVTRAMWELVTLQPTGYLDGRAVWLLAKFLGLHGFRIVKHEDGHLVPCDAGGPISSEECPMILHDGYGHFKALIPLRRMPLVSLVLPFAPRRGFH 606
KNVPA PKLRDNSRVYF TEGAQYMALDVGGGGLCALLGVIAVAMDAAGTPCEEIFAAVSG+LTDD K YVQSLRA VSTCGDQFAFKDGEELA+FDDIVHDPMWVIVTRAMWELVTL PTGYLDGRAVWLLAKFLGLHGFRIVKHEDGHLVPCDAGGPISSEECPM+LHDGYGHFKALIPLRRMPL F G+H
Sbjct: 15 KNVPAPPKLRDNSRVYFTTEGAQYMALDVGGGGLCALLGVIAVAMDAAGTPCEEIFAAVSGKLTDDMKEYVQSLRA--VSTCGDQFAFKDGEELASFDDIVHDPMWVIVTRAMWELVTLHPTGYLDGRAVWLLAKFLGLHGFRIVKHEDGHLVPCDAGGPISSEECPMMLHDGYGHFKALIPLRRMPLE-----FEMEEGYH 209
BLAST of mRNA_H-canaliculatus_F_contig12503.2125.1 vs. uniprot
Match: D7FGY2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGY2_ECTSI) HSP 1 Score: 350 bits (898), Expect = 1.330e-114 Identity = 172/188 (91.49%), Postives = 175/188 (93.09%), Query Frame = 1
Query: 1 KNVPATPKLRDNSRVYFMTEGAQYMALDVGGGGLCALLGVIAVAMDAAGTPCEEIFAAVSGELTDDTKGYVQSLRANIVSTCGDQFAFKDGEELANFDDIVHDPMWVIVTRAMWELVTLQPTGYLDGRAVWLLAKFLGLHGFRIVKHEDGHLVPCDAGGPISSEECPMILHDGYGHFKALIPLRRMPL 564
KNVPATPKL DNSRVYF T+GAQYMALDVGG GLCALLGVIAVAMD GTPCEEIF AVSGELTD YVQSLRANIVSTCGDQFAFKDGEELA+FDDIVHDPMWVI TRAMWELVTL PTGYLDGRAVWLLAKFLGLHGFRIVKHEDGHLV CDAGGPISSEECPM+LHDGYGHFKALIPLRRMPL
Sbjct: 15 KNVPATPKLCDNSRVYFTTKGAQYMALDVGGVGLCALLGVIAVAMDDVGTPCEEIFEAVSGELTDVMTEYVQSLRANIVSTCGDQFAFKDGEELASFDDIVHDPMWVIATRAMWELVTLHPTGYLDGRAVWLLAKFLGLHGFRIVKHEDGHLVSCDAGGPISSEECPMMLHDGYGHFKALIPLRRMPL 202
BLAST of mRNA_H-canaliculatus_F_contig12503.2125.1 vs. uniprot
Match: D7FVQ8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVQ8_ECTSI) HSP 1 Score: 352 bits (904), Expect = 1.780e-113 Identity = 173/193 (89.64%), Postives = 177/193 (91.71%), Query Frame = 1
Query: 1 KNVPATPKLRDNSRVYFMTEGAQYMALDVGGGGLCALLGVIAVAMDAAGTPCEEIFAAVSGELTDDTKGYVQSLRANIVSTCGDQFAFKDGEELANFDDIVHDPMWVIVTRAMWELVTLQPTGYLDGRAVWLLAKFLGLHGFRIVKHEDGHLVPCDAGGPISSEECPMILHDGYGHFKALIPLRRMPLVSLVL 579
KNVPATPKL DNSRVYF T+GAQYMALDVGGGGLCALLGVIAVAMD GTPCEEIF AVSGELTD YVQSLRANIVSTCGDQFAFKDGEELA+FDDIVHDPMWVI TRAMWELVTL PTGYLDGRAVWLLAKFLGLHGFRIVKHEDGHLV CDAGGPISSEECP +LHDGYGHFKALIPLRRMP L+L
Sbjct: 2 KNVPATPKLCDNSRVYFTTKGAQYMALDVGGGGLCALLGVIAVAMDDVGTPCEEIFEAVSGELTDVMTEYVQSLRANIVSTCGDQFAFKDGEELASFDDIVHDPMWVIATRAMWELVTLHPTGYLDGRAVWLLAKFLGLHGFRIVKHEDGHLVSCDAGGPISSEECPTMLHDGYGHFKALIPLRRMPEYHLLL 194
BLAST of mRNA_H-canaliculatus_F_contig12503.2125.1 vs. uniprot
Match: D8LH64_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH64_ECTSI) HSP 1 Score: 286 bits (732), Expect = 2.340e-86 Identity = 135/144 (93.75%), Postives = 138/144 (95.83%), Query Frame = 1
Query: 133 MDAAGTPCEEIFAAVSGELTDDTKGYVQSLRANIVSTCGDQFAFKDGEELANFDDIVHDPMWVIVTRAMWELVTLQPTGYLDGRAVWLLAKFLGLHGFRIVKHEDGHLVPCDAGGPISSEECPMILHDGYGHFKALIPLRRMPL 564
MDAAGTPCEEIF VSGELTDD K YVQSLRANIVSTCGD FAFKDGEELA+FDDIVHDPMWVIVTRAMWELVTL PTGYLDGRAVWLLAKFLGLHGFRIVKHEDGHLVPCDAGGPISS+ECPM+LHDGYGHFKALIPLRRMPL
Sbjct: 1 MDAAGTPCEEIFVGVSGELTDDMKEYVQSLRANIVSTCGDHFAFKDGEELASFDDIVHDPMWVIVTRAMWELVTLHPTGYLDGRAVWLLAKFLGLHGFRIVKHEDGHLVPCDAGGPISSQECPMMLHDGYGHFKALIPLRRMPL 144
BLAST of mRNA_H-canaliculatus_F_contig12503.2125.1 vs. uniprot
Match: D8LPN8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPN8_ECTSI) HSP 1 Score: 169 bits (427), Expect = 2.340e-49 Identity = 89/172 (51.74%), Postives = 109/172 (63.37%), Query Frame = 1
Query: 40 RVYFMTEGAQYMALDVGGGGLCA-LLGVIAVAMDAAGTPCEEIFAAVSGELTDDTKGYVQSLRANIVSTCGDQFAFKDGEELANFDDIVHDPMWVIVTRAMWELVTLQPTGYLDGRAVWLLAKFLGLHGFRIVKHEDGHLVPCDAGGPISSEECPMILHDGYGHFKALIPLR 552
RV EG +Y +DV G C +L IA+ M P E+I ++VSG LTDD YV +LR +V F+F DGEELA+FDD+V +PMWVI+ R MWE V L G DGRA L+ K L L G RIVKH++G L PCD G P+ S CPM+LHDGYGHFKAL+ R
Sbjct: 3 RVMSTPEGVKYRVVDVAGRDRCCEILAPIALNMFRENIPLEDIVSSVSGNLTDDMMKYVPTLRGKVVEMSRVFFSFADGEELADFDDVVDNPMWVIMARGMWEKVMLCFRGQFDGRAFLLMGKVLPLDGIRIVKHDNGILAPCDVGVPLPSGHCPMVLHDGYGHFKALLHFR 174
BLAST of mRNA_H-canaliculatus_F_contig12503.2125.1 vs. uniprot
Match: D7FZH0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZH0_ECTSI) HSP 1 Score: 146 bits (369), Expect = 5.290e-37 Identity = 81/173 (46.82%), Postives = 111/173 (64.16%), Query Frame = 1
Query: 31 DNSRVYFMTEGAQYMALDVGGGGLCALLGVIAVAMDAAGTPCEEIFAAVSGELTDDTKGYVQSLRANIVSTCGDQFA-FKDGEELANFDDIVHDPMWVIVTRAMWELVTLQPTGYLDGRAVWLLAKFLGLHGFRIVKHE-DGHLVPCDAGGPISSEECPMILHDGYGHFKALI 543
+ RVY +GA Y +LDV GGG+CA+L +IA+ M + G P +FAAV GE+T + +GYVQ LR IV + DGEE A FDD+V +P I T+ MW +V L G+LD A+ LLA++ GL+GFR+V+ + DG LVPCD G + + ++DG+GHFKALI
Sbjct: 33 EEGRVYHTPDGATYRSLDVAGGGMCAVLTLIALYMISNGDPYSFVFAAVCGEVTSEMRGYVQCLRGIIVHMSEGRITHLGDGEESAPFDDVVENPDHEIETKGMWRMVMLAARGFLDTLAMDLLAEYFGLNGFRVVRPDGDGLLVPCDYKGLTLEGDVHLAMYDGFGHFKALI 205 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12503.2125.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig12503.2125.1 >prot_H-canaliculatus_F_contig12503.2125.1 ID=prot_H-canaliculatus_F_contig12503.2125.1|Name=mRNA_H-canaliculatus_F_contig12503.2125.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=207bp KNVPATPKLRDNSRVYFMTEGAQYMALDVGGGGLCALLGVIAVAMDAAGTback to top mRNA from alignment at H-canaliculatus_F_contig12503:2253..3009- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig12503.2125.1 ID=mRNA_H-canaliculatus_F_contig12503.2125.1|Name=mRNA_H-canaliculatus_F_contig12503.2125.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=757bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12503:2253..3009- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig12503:2253..3009- >mRNA_H-canaliculatus_F_contig12503.2125.1 ID=mRNA_H-canaliculatus_F_contig12503.2125.1|Name=mRNA_H-canaliculatus_F_contig12503.2125.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1242bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12503:2253..3009- (Hapterophycus canaliculatus Oshoro5f female)back to top |