mRNA_H-canaliculatus_F_contig12501.2123.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig12501.2123.1 vs. uniprot
Match: A0A6H5JEB5_9PHAE (ABC protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JEB5_9PHAE) HSP 1 Score: 449 bits (1154), Expect = 1.060e-152 Identity = 226/262 (86.26%), Postives = 246/262 (93.89%), Query Frame = 1
Query: 1 GLELPPETNSADWVLDLTTSSTTVQGGKTLTEAYKQRKVEAFPSDMAVPTASTVTKTRDRLKGSGSDKSEWVTSFAYQLKVLLQRQSRQSRGEVFNSVNLGQIFMVAVIASAIWWQSDNVADIAGSMFFISIQQAFNGLNTSMRVFPPERGLMIRERSTGSYRVGPYFLAKSTSDIGIYTVAPMLMATAVYWCVGLRAEVGAFLTFLLLFMGQVIVGQSLGLLISTAISDVFTAQSFSFVFVLTLMLFGGFYVNSENIPVGL 786
GLELPPETNSADW+LDLTTSST VQGGKTLT+AY+QR + SDMAVPTASTVTKTRDRLKGSGSDKSEWVTSF YQLKVLLQRQSRQSRGEVFNSVNL QIF+VA++ASAIWWQS+NV+DIAG+MFFISIQQAFNGLNTSMRVFPPERGLMIRERSTGSYRVGPYFLAKSTSDIG+YT AP+L ATAVYWCVGLR E GAF TFLLLFMGQVIVGQS+GLLIST+I+D+FTAQSFSFV +L+LMLFGGFYVN+ N+P GL
Sbjct: 282 GLELPPETNSADWILDLTTSSTIVQGGKTLTQAYQQRTIGPLSSDMAVPTASTVTKTRDRLKGSGSDKSEWVTSFGYQLKVLLQRQSRQSRGEVFNSVNLTQIFVVAMMASAIWWQSENVSDIAGTMFFISIQQAFNGLNTSMRVFPPERGLMIRERSTGSYRVGPYFLAKSTSDIGLYTAAPILYATAVYWCVGLRPEAGAFFTFLLLFMGQVIVGQSIGLLISTSIADIFTAQSFSFVLILSLMLFGGFYVNNNNVPEGL 543
BLAST of mRNA_H-canaliculatus_F_contig12501.2123.1 vs. uniprot
Match: A0A835YP26_9STRA (ATP-binding cassette superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YP26_9STRA) HSP 1 Score: 275 bits (704), Expect = 1.570e-84 Identity = 150/296 (50.68%), Postives = 193/296 (65.20%), Query Frame = 1
Query: 1 GLELPPETNSADWVLDLTTSST---TVQGGKTLTEAYKQRKV-------------------------------EAFPSDMAVPTASTVTKTRDRLKGSGSDKSEWVTSFAYQLKVLLQRQSRQSRGEVFNSVNLGQIFMVAVIASAIWWQSDNVADIAGSMFFISIQQAFNGLNTSMRVFPPERGLMIRERSTGSYRVGPYFLAKSTSDIGIYTVAPMLMATAVYWCVGLRAEVGAFLTFLLLFMGQVIVGQSLGLLISTAISDVFTAQSFSFVFVLTLMLFGGFYVNSENIPVGL 786
GLELPP TN+ADWVLDLT ++ + G T+T+AY + + VPTA ++ K S WVT+F YQL+VLL+RQ +QSRGEVF+ VN+ QI VAVIASA+W+QS+N++DI G FFISIQQ+FN L++ MRVFP ERGLM+RERSTGSYRVGPYFLAKS SD+ +Y + P + AT VYWCVGLR AF+ +L++F+ +++ QS+G+LIS AI D AQSFSFV VL +MLFGGFYVN++ IP G+
Sbjct: 320 GLELPPATNAADWVLDLTAGTSGNNLLPNGMTITDAYAHGGLMXXXXXXXXXXXXXXXXXXXXXXXXSVAGLDDGALKARGVPTADSIKVAETEFKDKKLSTS-WVTTFWYQLRVLLERQGKQSRGEVFSGVNIFQILAVAVIASAVWFQSNNISDITGVFFFISIQQSFNALSSIMRVFPAERGLMMRERSTGSYRVGPYFLAKSFSDMALYVLFPAIYATLVYWCVGLRPSASAFVVYLVIFLSEIMAAQSVGMLISAAIKDFAAAQSFSFVLVLVIMLFGGFYVNNDRIPQGI 614
BLAST of mRNA_H-canaliculatus_F_contig12501.2123.1 vs. uniprot
Match: A0A6U1MQ19_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1MQ19_9STRA) HSP 1 Score: 183 bits (464), Expect = 7.400e-50 Identity = 104/266 (39.10%), Postives = 154/266 (57.89%), Query Frame = 1
Query: 1 GLELPPETNSADWVLDLTTSSTTVQGGKTLTEAYKQRKVEAFPSDMAVPTASTVTKTRDRLKGSGSDKS---EWVTSFAYQLKVLLQRQSRQSRGEVFNSVNLGQIFMVAVIASAIWWQSDNVADIAGSMFFISIQQAFNGLNTSMRVFPPERGLMIRERSTGSYRVGPYFLAKSTSDIGIYTVAPMLMATAVYWCVGL-RAEVGAFLTFLLLFMGQVIVGQSLGLLISTAISDVFTAQSFSFVFVLTLMLFGGFYVNSENIPVGL 786
GL +PP TN ADW+LD+ ++T + G L++A+K + S+ + AS ++ L +G + +W TSF YQ VL QR ++QS GE F+ VN+ I + A A+W+Q+ N+ D+ G +FF+ + Q F+ T R+FP ER LM+RERSTGSY+VGPYFLAK+ SD+ V P + A VY GL V F ++ +F V+ GQS G S A++D+ A F +L +++ GGFY+ +P GL
Sbjct: 315 GLHVPPLTNPADWLLDVIVGNSTTKDGSELSDAWKSSSDSSDTSECSGAPASHISSEDVTLVENGDEDDAGRKWSTSFWYQFLVLYQRSAKQSSGENFDRVNVLGILLTAACMCAMWFQATNLKDLVGLLFFLVLNQPFSMAATVCRIFPKERSLMMRERSTGSYQVGPYFLAKTCSDLTAGYVVPTIYAIMVYCFCGLYTGSVSHFFLYMAIFWAMVMTGQSYGYFWSAAVTDLPMANMLVFTTILFMVIAGGFYIPMARLPTGL 580
BLAST of mRNA_H-canaliculatus_F_contig12501.2123.1 vs. uniprot
Match: R1DY78_EMIHU (ABC transporter domain-containing protein n=3 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DY78_EMIHU) HSP 1 Score: 181 bits (460), Expect = 1.450e-49 Identity = 115/267 (43.07%), Postives = 153/267 (57.30%), Query Frame = 1
Query: 1 GLELPPETNSADWVLDLTTSSTTV-------QGGKTLTEAYKQRKVEAFPSDMA-VPTASTVTKTRDRLKGSGSDKSEWVTSFAYQLKVLLQRQSRQSRGEVFNSVNLGQIFMVAVIASAIWWQSDNVADIAGSMFFISIQQAFNGLNTSMRVFPPERGLMIRERSTGSYRVGPYFLAKSTSDIGIYTVAPMLMATAVYWCVGLRAEVGAFLTFLLLFMGQVIVGQSLGLLISTAISDVFTAQSFSFVFVLTLMLFGGFYVNSENIP 777
G LP TN ADW++DL +G VE S A +P+A+ RL GS S W +Q VLL+R ++Q RG+V+N N+ QI VAVIA+ +W + V+DI G +FF++IQQAFN NT +R+FP ER LM+RER G+YR+ PYFLA+S +D V P+L A +Y+ VGLR G F T+L L + V GQS+GL IS I D+ + SF+FVL +MLFGGFYV + IP
Sbjct: 273 GEALPSLTNPADWLIDLVDERPAQLLDCWAREGRGDGGAGADGGAVEEASSRRAKLPSAA-------RLAGSHFATSSW-----WQFCVLLERSAKQQRGDVYNLTNIFQILAVAVIAAILWSGATTVSDIKGVLFFVNIQQAFNAQNTVLRLFPLERQLMLRERRCGTYRMLPYFLARSAADSFAILVLPVLYAIIIYFSVGLRPGAGPFFTYLALSLSTVFTGQSIGLFISLLIPDLALSSCVSFIFVLMVMLFGGFYVGVDRIP 527
BLAST of mRNA_H-canaliculatus_F_contig12501.2123.1 vs. uniprot
Match: A0A7S4F7N7_CHRCT (Hypothetical protein (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4F7N7_CHRCT) HSP 1 Score: 171 bits (432), Expect = 4.500e-47 Identity = 108/257 (42.02%), Postives = 147/257 (57.20%), Query Frame = 1
Query: 4 LELPPETNSADWVLDL--TTSSTTVQGGKTLTEAYKQRKVEAFPSDMAVP---------------TASTVTKTRDR-LKGSGSDKSEWVTSFAYQLKVLLQRQSRQSRGEVFNSVNLGQIFMVAVIASAIWWQSDNVADIAGSMFFISIQQAFNGLNTSMRVFPPERGLMIRERSTGSYRVGPYFLAKSTSDIGIYTVAPMLMATAVYWCVGLRAEVGAFLTFLLLFMGQVIVGQSLGLLISTAISDVFTAQSFSFV 720
L LPP+TN ADW++DL SS + + +E Q + +D + P T +T T+T +G S + TS +Q +VLL R ++Q RG+V+N N QI VAVIA+ +W N++D G +FF++IQQAFN NT +R+FP ER LM+RER GSYR+ PYFLAKS SD V P++ A +Y+ VGLR E GAF +L L + V GQS+GL+IS A+ D A SFV
Sbjct: 157 LRLPPQTNPADWLIDLIDARSSELLDAWRGFSE---QSAKGSGIADGSAPFSGSHGSNGASEHRVTKATGTRTAGAGARGPASANTGPTTSSWFQFRVLLARSAKQQRGDVYNKTNCFQILAVAVIAALLWSGDSNISDRKGVLFFVNIQQAFNAQNTVLRLFPRERSLMLRERRCGSYRMLPYFLAKSASDSVSIFVLPVIYAIIIYFSVGLRREAGAFFVYLALSLSTVFAGQSIGLIISLAVPDFALANCISFV 410
BLAST of mRNA_H-canaliculatus_F_contig12501.2123.1 vs. uniprot
Match: A0A7S3XRQ7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XRQ7_HETAK) HSP 1 Score: 164 bits (415), Expect = 1.120e-43 Identity = 98/273 (35.90%), Postives = 146/273 (53.48%), Query Frame = 1
Query: 13 PPETNSADWVLDLTTSSTTVQGGKTLTEAYKQRKVEAFPS-DMAVPTASTVTKTRDRLKGSGSD--------------KSEWVTSFAYQLKVLLQRQSRQSRGEVFNSVNLGQIFMVAVIASAIWWQSDNVADIAGSMFFISIQQAFNGLNTSMRVFPPERGLMIRERSTGSYRVGPYFLAKSTSDIGIYTVAPMLMATAVYWCVGLRAEVGAFLTFLLLFMGQVIVGQSLGLLISTAISDVFTAQSFSFVFVLTLMLFGGFYVNSENIPVGL 786
P + ADW LDL + K + E R + P+ ++P + + SGSD + W TS A+Q +VLL+RQ ++ RG N V+ Q V+ I A+WWQ++NV DI G +FF++I QAFN + ++VFP +R L++RER G YRVG YFLA++ SD + PML A Y G+ + F T++ LF ++ Q+ GLL+S+ +V A +F VL L+L GGFYV ++ +PVG+
Sbjct: 168 PADVAPADWALDLL-ADLGADADKLVEEWSSNRSPKEAPAAGDSIPLLA---------RSSGSDGGGDEXXXXXXXXXXTRWATSGAHQFRVLLERQLKEGRGSALNKVSFIQCLAVSAIVCALWWQTNNVNDILGFLFFVTINQAFNVVQAMVKVFPAQRALLVRERGAGYYRVGAYFLARTLSDSLTSYIFPMLYALLCYTGTGVVSSAEDFFTYMALFFSVIMAAQAYGLLLSSMFREVQIATIVAFTSVLALLLIGGFYVENDRLPVGI 430
BLAST of mRNA_H-canaliculatus_F_contig12501.2123.1 vs. uniprot
Match: UPI001C4F9FC7 (ABC transporter G family member 25-like n=1 Tax=Macadamia integrifolia TaxID=60698 RepID=UPI001C4F9FC7) HSP 1 Score: 137 bits (344), Expect = 4.030e-33 Identity = 75/194 (38.66%), Postives = 111/194 (57.22%), Query Frame = 1
Query: 187 GSGSDKSEWVTSFAYQLKVLLQRQSRQSRGEVFNSVNLGQIFMVAVIASAIWWQSD--NVADIAGSMFFISIQQAFNGLNTSMRVFPPERGLMIRERSTGSYRVGPYFLAKSTSDIGIYTVAPMLMATAVYWCVGLRAEVGAFLTFLLLFMGQVIVGQSLGLLISTAISDVFTAQSFSFVFVLTLMLFGGFYVN 762
GSGS S W F +LLQR ++ R E FNS+ + Q+ + A++A A+WWQSD ++ D G +FFI+I S+ FP ER + I+ERS+G Y + YF+A++ DI + + PM+ T YW GL E GAF+ + + +G V+V Q LGL + I D A + V +L +L GG+YV+
Sbjct: 372 GSGSSSSSWFNQFT----ILLQRSLKERRHESFNSLRVFQVILAALLAGAMWWQSDFRDIQDRLGFLFFIAIFWGVFPAFNSVFTFPQERAIFIKERSSGMYTLSSYFMARAVGDIPMELILPMVFTTMAYWMAGLMPEFGAFMLTVAVLLGYVLVAQGLGLALGGIIMDAKQASTVVTVTMLAFVLTGGYYVH 561
BLAST of mRNA_H-canaliculatus_F_contig12501.2123.1 vs. uniprot
Match: A0A5C7HSG0_9ROSI (ABC transporter domain-containing protein n=1 Tax=Acer yangbiense TaxID=1000413 RepID=A0A5C7HSG0_9ROSI) HSP 1 Score: 136 bits (343), Expect = 5.710e-33 Identity = 76/232 (32.76%), Postives = 125/232 (53.88%), Query Frame = 1
Query: 88 LTEAYKQRKVEAFPSDMAVPTASTVTKTRDRLKGSGSDKSEWVTSFAYQLKVLLQRQSRQSRGEVFNSVNLGQIFMVAVIASAIWWQS--DNVADIAGSMFFISIQQAFNGLNTSMRVFPPERGLMIRERSTGSYRVGPYFLAKSTSDIGIYTVAPMLMATAVYWCVGLRAEVGAFLTFLLLFMGQVIVGQSLGLLISTAISDVFTAQSFSFVFVLTLMLFGGFYVNSENIP 777
L AY++ S++ + + T+D + +W TS+ +Q KVLLQR R+ R E FN + + Q+ VAV+ +WW + ++AD +FF S+ F L ++ FP ER ++I+ERS+G YR+ YFLA++ D+ + P +YW GL+A+ F+ LL+ + V+V QSLGL I + D+ A + + V L ++ GG+Y+ + IP
Sbjct: 347 LVSAYEKNITTRLKSELYNSDVNNYSYTKDASTRNNRKAEQWCTSWWHQFKVLLQRGVRERRFEAFNKLRIFQVISVAVLGGLLWWHTPTSHIADRIALLFFFSVFWGFYPLYNAVFTFPQERTMLIKERSSGMYRLSSYFLARTIGDLPLELALPTAFVIIIYWMSGLKADPVTFILSLLIVLYSVLVSQSLGLAIGAILMDIKQATTLASVTTLVFLIAGGYYI--QQIP 576
BLAST of mRNA_H-canaliculatus_F_contig12501.2123.1 vs. uniprot
Match: A0A1S3ZV93_TOBAC (ABC transporter G family member 21-like n=4 Tax=Nicotiana TaxID=4085 RepID=A0A1S3ZV93_TOBAC) HSP 1 Score: 134 bits (338), Expect = 3.880e-32 Identity = 71/202 (35.15%), Postives = 118/202 (58.42%), Query Frame = 1
Query: 178 RLKGSGSDKSEWVTSFAYQLKVLLQRQSRQSRGEVFNSVNLGQIFMVAVIASAIWWQSD--NVADIAGSMFFISIQQAFNGLNTSMRVFPPERGLMIRERSTGSYRVGPYFLAKSTSDIGIYTVAPMLMATAVYWCVGLRAEVGAFLTFLLLFMGQVIVGQSLGLLISTAISDVFTAQSFSFVFVLTLMLFGGFYVNSENIP 777
RL D+++W TS+ Q KVLLQR ++ + E ++ + + Q+ V+ ++ +WW SD ++ D G +FF SI F L +++ FP ER ++IRERS+G YR+ Y+ A++ D+ + + P + T YW GL+ + AFL LL+ + V+V Q LGL + + DV A + S V +L +L G+Y+ ++IP
Sbjct: 521 RLSSRSRDENQWTTSWWLQFKVLLQRGLKERKHESYSGLRIFQVMSVSFLSGLLWWHSDTNHIMDQVGLLFFFSIFWGFFPLFSAIFAFPQERPMLIRERSSGMYRLSSYYFARTVGDLPMELILPTIFVTVTYWMGGLKPSIIAFLLTLLIILLNVLVAQGLGLALGAILMDVKQATTLSSVLMLVFLLASGYYI--QHIP 720
BLAST of mRNA_H-canaliculatus_F_contig12501.2123.1 vs. uniprot
Match: A0A0D6R634_ARACU (ABC transporter domain-containing protein n=2 Tax=Araucariaceae TaxID=25664 RepID=A0A0D6R634_ARACU) HSP 1 Score: 134 bits (336), Expect = 6.270e-32 Identity = 70/194 (36.08%), Postives = 114/194 (58.76%), Query Frame = 1
Query: 190 SGSDKSEWVTSFAYQLKVLLQRQSRQSRGEVFNSVNLGQIFMVAVIASAIWWQS--DNVADIAGSMFFISIQQAFNGLNTSMRVFPPERGLMIRERSTGSYRVGPYFLAKSTSDIGIYTVAPMLMATAVYWCVGLRAEVGAFLTFLLLFMGQVIVGQSLGLLISTAISDVFTAQSFSFVFVLTLMLFGGFYVNS 765
S +K+EW TS+ Q VLL+R ++ R E F ++ + Q+ V+ +A +WWQS ++ D G +FF SI F L ++ FP E ++I+ERS+G YR+ YF+A++ D+ + + P + YW GLR + +F LL+ + V+V Q LGL + A+ DV A + S V +LT +L GG+Y+++
Sbjct: 437 SNCEKNEWATSWWEQFSVLLRRSLKERRHESFGALRIFQVLTVSTLAGLLWWQSKVSHIQDQVGLLFFFSIFWGFFPLFNAIFTFPQESSMLIKERSSGMYRLSSYFVARTVGDLPMELILPTVFVCITYWMGGLRQDARSFALTLLIILYNVLVSQGLGLAMGAALMDVKQATTLSSVTMLTFLLVGGYYIHT 630 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12501.2123.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig12501.2123.1 >prot_H-canaliculatus_F_contig12501.2123.1 ID=prot_H-canaliculatus_F_contig12501.2123.1|Name=mRNA_H-canaliculatus_F_contig12501.2123.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=263bp GLELPPETNSADWVLDLTTSSTTVQGGKTLTEAYKQRKVEAFPSDMAVPTback to top mRNA from alignment at H-canaliculatus_F_contig12501:59..3456+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig12501.2123.1 ID=mRNA_H-canaliculatus_F_contig12501.2123.1|Name=mRNA_H-canaliculatus_F_contig12501.2123.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3398bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12501:59..3456+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig12501:59..3456+ >mRNA_H-canaliculatus_F_contig12501.2123.1 ID=mRNA_H-canaliculatus_F_contig12501.2123.1|Name=mRNA_H-canaliculatus_F_contig12501.2123.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1578bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12501:59..3456+ (Hapterophycus canaliculatus Oshoro5f female)back to top |