mRNA_H-canaliculatus_F_contig1250.2119.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1250.2119.1 vs. uniprot
Match: A0A6H5KVV4_9PHAE (HSF_DOMAIN domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KVV4_9PHAE) HSP 1 Score: 543 bits (1399), Expect = 1.640e-177 Identity = 367/618 (59.39%), Postives = 401/618 (64.89%), Query Frame = 2
Query: 104 MRPMPLKLQDAEGVPTTMQQKPQXXXXXXXXXXXXXAAFSPTRRVGARGGPQLFAQKLFTLVEEEDSEIVEWLPDGLAFRVKDIHRFSCEVLEKYFNHSKFTSFQRQLNLYQFKRRKGAHAGAFHHPSFRRGQRHLLSKVRRQKVKRDLAVEARAAQRLARAKSGGGGGD-NAASQHGLSGRGRTRAAAQGDLRPIRRHRQIDDDDVSDDDEEFDPAPGSRRSALRRRVDSGPDRYAQDGGDIDGDESSN--------------------DGSWPNGNNPCGSGLERFSSGDD-DDQLDWGESSNGDVNNNWRQQVPGSPERSPMELHHVSTPMTMTSQSEYEHSPNG---GLGRTSSVGSSMASSLSFAS----SPSHSEIMFHSSSPYQLND--CDESG-QSDCTSNQHSPMSIHSPVDQAVATVQAAA------NQVSPAQQQHSNDLSLAAVVDASINGWSSPHQSSSLLHLEQFGWGAANVA--GDAAAPWS-DPSNS-GVPHHHQSSQSSPHSHEDFGFIDLFAANWDPSEG-SSPSXXXXXXXXXXXXXXXXXXXXXXXXXXRSV-TADEDDAFLKEAQAAGVFGGVEDFLIPRSSIGA-TGGYGVPGDFA 1822
MRPMP+K Q A P+ Q + Q AFSPTRRVGARGGPQLFAQKLFTLVEEEDSEIVEWLPDGLAFRVKDI RFSCEVLEKYFNHSKFTSFQRQLNLYQFKRRKGAHAGAFHHPSFRRGQRHLLSKVRRQKVKRDLAVEARAAQRLAR K G NA LSGRGRTRAAAQ DLRPIRR R+++DD +G+WP GLER SSGD D++L G+ N + N++WR+QVPGSP RSP L HV TP TMTS S+YEHSP G GL RTSSV SS+ASSLSF+S SPS S+ F SSPY D CDESG SD NQHSPMSIHSPV QAVATVQAAA Q SPA QQ+ DLSLAAVVDAS+NGW+SPHQSS L HLEQFGWGAAN+ GDA PWS +PS + GVP HHQ SQ+SPH EDFGFIDLFAANWDP++G S+PS XXXX ++ DAFLKEAQAAGVF GVED L+PRSS+G G +G P DFA
Sbjct: 1 MRPMPVKFQGAGEAPSMKQHQAQHQELSSTGGGGG-TAFSPTRRVGARGGPQLFAQKLFTLVEEEDSEIVEWLPDGLAFRVKDIQRFSCEVLEKYFNHSKFTSFQRQLNLYQFKRRKGAHAGAFHHPSFRRGQRHLLSKVRRQKVKRDLAVEARAAQRLARVKGGXXXXXXNAFVASQLSGRGRTRAAAQADLRPIRRGRKLEDDATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGTWPT--QSTAGGLERVSSGDSKDERLCRGQPDNMN-NDHWREQVPGSPARSPTGLQHVLTPTTMTSPSDYEHSPVGDFGGLDRTSSVSSSLASSLSFSSAGSCSPSQSDTTFDPSSPYLFRDTDCDESGGHSDPIINQHSPMSIHSPVGQAVATVQAAAAAVAKATQTSPAMQQYDQDLSLAAVVDASLNGWNSPHQSSPLSHLEQFGWGAANITIPGDAGGPWSSEPSPATGVPIHHQLSQASPHQ-EDFGFIDLFAANWDPNDGGSAPSCTPASSTYSGVRASSPPDNSKSXXXXXDGRNMNDSDAFLKEAQAAGVFIGVEDLLVPRSSVGGGAGSFGGPVDFA 613
BLAST of mRNA_H-canaliculatus_F_contig1250.2119.1 vs. uniprot
Match: A0A6V1QFS1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QFS1_HETAK) HSP 1 Score: 103 bits (257), Expect = 1.340e-19 Identity = 54/100 (54.00%), Postives = 71/100 (71.00%), Query Frame = 2
Query: 233 RVGARGGPQLFAQKLFTLVEEEDSEIVEWLPDGLAFRVKDIHRFSCEVLEKYFNHSKFTSFQRQLNLYQFKR-RKGAHAGAFHHPSFRRGQRHLLSKVRR 529
R G RG PQ FA+KL+ ++E E +++ W G AF V+DI RFS E+L KYF HSKF SFQRQLNLY F++ +G+ AG++ H FR+G+ LLS VRR
Sbjct: 5 RTGQRGAPQAFARKLYEILEVEPGDLLSWNAAGNAFFVRDIDRFSKEILMKYFRHSKFASFQRQLNLYGFRKITRGSDAGSYAHQYFRKGKPDLLSLVRR 104
BLAST of mRNA_H-canaliculatus_F_contig1250.2119.1 vs. uniprot
Match: A0A835YGA3_9STRA (HSF-type DNA-binding-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGA3_9STRA) HSP 1 Score: 102 bits (255), Expect = 5.720e-19 Identity = 53/100 (53.00%), Postives = 66/100 (66.00%), Query Frame = 2
Query: 233 RVGARGGPQLFAQKLFTLVEEEDSEIVEWLPDGLAFRVKDIHRFSCEVLEKYFNHSKFTSFQRQLNLYQFKRR-KGAHAGAFHHPSFRRGQRHLLSKVRR 529
R G RG PQ FA KLF L+ E +IV W P GLAFR+ D+ +F+ E L KYF H+ SFQRQLNLY F++ KG +G F H SF+R + LL +VRR
Sbjct: 19 RFGKRGAPQAFATKLFELLSNESPDIVSWTPSGLAFRIHDMEKFTSECLIKYFKHNNAASFQRQLNLYGFRKSLKGEDSGGFQHASFQRDRPELLIEVRR 118
BLAST of mRNA_H-canaliculatus_F_contig1250.2119.1 vs. uniprot
Match: A0A7R9YBQ9_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBQ9_9STRA) HSP 1 Score: 102 bits (253), Expect = 6.310e-19 Identity = 52/100 (52.00%), Postives = 68/100 (68.00%), Query Frame = 2
Query: 233 RVGARGGPQLFAQKLFTLVEEEDSEIVEWLPDGLAFRVKDIHRFSCEVLEKYFNHSKFTSFQRQLNLYQFKR-RKGAHAGAFHHPSFRRGQRHLLSKVRR 529
R G RG PQ+F +KLF L+E+EDS ++ W +G F ++D+ F+ E LE+YF H KFTSFQRQLNLY F++ KG G + HP F+R LSKVRR
Sbjct: 50 RTGKRGAPQVFPRKLFELLEKEDSAVIRWDEEGECFVIQDMDTFTRESLERYFKHHKFTSFQRQLNLYGFRKIAKGERCGYYVHPHFQRDHPEWLSKVRR 149
BLAST of mRNA_H-canaliculatus_F_contig1250.2119.1 vs. uniprot
Match: A0A7S2BSE7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BSE7_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 6.330e-18 Identity = 45/100 (45.00%), Postives = 65/100 (65.00%), Query Frame = 2
Query: 233 RVGARGGPQLFAQKLFTLVEEEDSEIVEWLPDGLAFRVKDIHRFSCEVLEKYFNHSKFTSFQRQLNLYQFKR-RKGAHAGAFHHPSFRRGQRHLLSKVRR 529
R G RG PQ+F +KL+ ++ E +I+ W G +F +K++ F +L KYF H K++SFQRQLNLY F++ +KG G++ H F R Q LL+KVRR
Sbjct: 5 RTGRRGAPQVFPRKLYEILSTEREDIIGWTDSGKSFIIKEMETFVTNILMKYFRHQKYSSFQRQLNLYGFRKVQKGTDVGSYAHECFIRDQPELLTKVRR 104
BLAST of mRNA_H-canaliculatus_F_contig1250.2119.1 vs. uniprot
Match: A0A812YT23_SYMMI (HSF2 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812YT23_SYMMI) HSP 1 Score: 95.9 bits (237), Expect = 1.620e-17 Identity = 49/98 (50.00%), Postives = 69/98 (70.41%), Query Frame = 2
Query: 263 FAQKLFTLVEEEDSEIVEWLPDGLAFRVKDIHRFSCEVLEKYFNHSKFTSFQRQLNLYQFKR-RKGAHAGAFHHPSFRRGQRHLLSKVRRQKVKRDLA 553
F QKLF L+E E +++V W GL+FRV D +F+ EV+ KYF H+K TSFQRQLNLY F+R KG G+++HP F+RG+R +S+++R K L+
Sbjct: 13 FPQKLFALMEMEPADVVCWTERGLSFRVVDPEKFAEEVVPKYFRHTKMTSFQRQLNLYGFRRVTKGEDTGSYYHPKFQRGRRDFISEIKRLPGKSSLS 110
BLAST of mRNA_H-canaliculatus_F_contig1250.2119.1 vs. uniprot
Match: A0A6H5KMN3_9PHAE (HSF_DOMAIN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMN3_9PHAE) HSP 1 Score: 99.0 bits (245), Expect = 2.040e-17 Identity = 51/100 (51.00%), Postives = 68/100 (68.00%), Query Frame = 2
Query: 233 RVGARGGPQLFAQKLFTLVEEEDSEIVEWLPDGLAFRVKDIHRFSCEVLEKYFNHSKFTSFQRQLNLYQFKRR-KGAHAGAFHHPSFRRGQRHLLSKVRR 529
R+G RG PQ FA+KL ++ E + + W +G AF+V D+ RFS ++L KY+ HSKF+SFQRQLNLY F++ KGA AG + HP FRR + L VRR
Sbjct: 33 RIGKRGAPQAFARKLAEILATESTATISWNANGSAFQVHDVERFSEDILTKYYRHSKFSSFQRQLNLYSFRKIVKGADAGGYAHPMFRRDRPDDLYHVRR 132
BLAST of mRNA_H-canaliculatus_F_contig1250.2119.1 vs. uniprot
Match: A0A835Z6Z9_9STRA (HSF-type DNA-binding-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6Z9_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 2.400e-17 Identity = 44/98 (44.90%), Postives = 64/98 (65.31%), Query Frame = 2
Query: 239 GARGGPQLFAQKLFTLVEEEDSEIVEWLPDGLAFRVKDIHRFSCEVLEKYFNHSKFTSFQRQLNLYQFKR-RKGAHAGAFHHPSFRRGQRHLLSKVRR 529
G RG PQ F ++L+ L++EED+ +V W+ +G F + D+ F L KYF H+K+TSFQRQ NLY F++ +G AG + H F++G+ L KVRR
Sbjct: 1 GKRGAPQAFPRRLYELLQEEDASVVSWIKNGEGFIINDMDTFVNTTLVKYFQHNKYTSFQRQCNLYGFRKITRGPDAGMYIHEHFKKGRLEDLVKVRR 98
BLAST of mRNA_H-canaliculatus_F_contig1250.2119.1 vs. uniprot
Match: A0A7S3H846_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H846_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 3.690e-17 Identity = 46/102 (45.10%), Postives = 61/102 (59.80%), Query Frame = 2
Query: 224 PTRRVGARGGPQLFAQKLFTLVEEEDSEIVEWLPDGLAFRVKDIHRFSCEVLEKYFNHSKFTSFQRQLNLYQFKRRKGAHAGAFHHPSFRRGQRHLLSKVRR 529
P + R F KLF LV ED IV W G +F+V+D+ +F +L K+F H+ FTSFQRQLNLY F+R GA++HP F++GQR L +RR
Sbjct: 22 PGTNIPYRNYSNTFPVKLFDLVSSEDEGIVGWQGHGTSFQVRDMDKFVNLILPKHFKHNNFTSFQRQLNLYGFRRSASYDKGAYYHPQFQQGQRELAESIRR 123
BLAST of mRNA_H-canaliculatus_F_contig1250.2119.1 vs. uniprot
Match: A0A7S2WKC6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WKC6_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 6.870e-17 Identity = 49/100 (49.00%), Postives = 65/100 (65.00%), Query Frame = 2
Query: 233 RVGARGGPQLFAQKLFTLVEEEDSEIVEWLPDGLAFRVKDIHRFSCEVLEKYFNHSKFTSFQRQLNLYQFKRR-KGAHAGAFHHPSFRRGQRHLLSKVRR 529
R G RG PQ FA KL+ ++E E +E++ W G AF +KD+ F +VL KYF H K++SFQRQLNLY F++ KG G ++H F R +R LL VRR
Sbjct: 75 RTGKRGAPQAFAHKLYEILEAESTEVIAWSGTGRAFFIKDMDIFVSQVLLKYFRHVKYSSFQRQLNLYGFRKATKGQDVGGYYHHYFMRSRRDLLPFVRR 174 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1250.2119.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1250.2119.1 >prot_H-canaliculatus_F_contig1250.2119.1 ID=prot_H-canaliculatus_F_contig1250.2119.1|Name=mRNA_H-canaliculatus_F_contig1250.2119.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=574bp MRPMPLKLQDAEGVPTTMQQKPQQPQQASSTGGSGGAAFSPTRRVGARGGback to top mRNA from alignment at H-canaliculatus_F_contig1250:4173..8764+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1250.2119.1 ID=mRNA_H-canaliculatus_F_contig1250.2119.1|Name=mRNA_H-canaliculatus_F_contig1250.2119.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=4592bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1250:4173..8764+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1250:4173..8764+ >mRNA_H-canaliculatus_F_contig1250.2119.1 ID=mRNA_H-canaliculatus_F_contig1250.2119.1|Name=mRNA_H-canaliculatus_F_contig1250.2119.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=3444bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1250:4173..8764+ (Hapterophycus canaliculatus Oshoro5f female)back to top |