mRNA_H-canaliculatus_F_contig125.2112.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig125.2112.1
Unique NamemRNA_H-canaliculatus_F_contig125.2112.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
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BLAST of mRNA_H-canaliculatus_F_contig125.2112.1 vs. uniprot
Match: D8LID9_ECTSI (Proteasome subunit alpha type n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LID9_ECTSI)

HSP 1 Score: 318 bits (815), Expect = 3.610e-104
Identity = 158/169 (93.49%), Postives = 161/169 (95.27%), Query Frame = 1 
Query:    1 RYVYGTTMQAGRLVLDLADMHQRTTQSYVRRPYGVGMLVAAHDQTGPHLFQTCPSGNYFEYVAMAIGARSQSAKTYLEKHFESFESCDLDELVKHALKALSGCVTGDKELDAQGLTLAIVGKDKVFETLEGEQLQPYMDAIELEGNAAQPMDEGGVEEEKVPAPDVGMA 507
            +YVYGTTMQA RLVLDLADMHQRTTQSYVRRPYGVGMLVAAHDQTGPHLFQTCPSGNYFEYVAMAIGARSQSAKTYLEKHFE FE+CDLDELVKHALKALSGCVTGDKELDA GLTLAIVGKDKVFE+LEGEQLQPYMDAIELEGNAAQPMDEG  EE K PAPD GMA
Sbjct:   96 KYVYGTTMQASRLVLDLADMHQRTTQSYVRRPYGVGMLVAAHDQTGPHLFQTCPSGNYFEYVAMAIGARSQSAKTYLEKHFEDFENCDLDELVKHALKALSGCVTGDKELDANGLTLAIVGKDKVFESLEGEQLQPYMDAIELEGNAAQPMDEGDGEE-KAPAPDAGMA 263
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BLAST of mRNA_H-canaliculatus_F_contig125.2112.1 vs. uniprot
Match: A0A836CE23_9STRA (Proteasome subunit alpha type n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE23_9STRA)

HSP 1 Score: 231 bits (590), Expect = 3.060e-70
Identity = 114/171 (66.67%), Postives = 137/171 (80.12%), Query Frame = 1 
Query:    1 RYVYGTTMQAGRLVLDLADMHQRTTQSYVRRPYGVGMLVAAHDQTGPHLFQTCPSGNYFEYVAMAIGARSQSAKTYLEKHFESFESCDLDELVKHALKALSGCVTGDKELDAQGLTLAIVGKDKVFETLEGEQLQPYMDAIELEGNAAQPMDEGGVEEEK-VPAP-DVGMA 507
            +YVYGT +QA RL  DLADMHQR TQSYVRRPYGVGML+AAHD TGPHL +T PSGNYFEYVAMAIGARSQSAKTYLEKH++ F +  +D+L+KH LKALSGC+TGDKELD   +++AIVG  + FE ++G +LQ ++DAIE+EG+AA P   G  E    VPAP D G+A
Sbjct:   96 KYVYGTQLQANRLATDLADMHQRCTQSYVRRPYGVGMLIAAHDATGPHLMETSPSGNYFEYVAMAIGARSQSAKTYLEKHYQDFPAASVDDLIKHGLKALSGCITGDKELDVASVSVAIVGAGQAFEEVQGARLQAFLDAIEVEGDAAAPAPAGEPEAPADVPAPMDEGIA 266
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BLAST of mRNA_H-canaliculatus_F_contig125.2112.1 vs. uniprot
Match: A0A6U3ZK57_9STRA (Proteasome subunit alpha type n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6U3ZK57_9STRA)

HSP 1 Score: 210 bits (535), Expect = 4.500e-62
Identity = 98/145 (67.59%), Postives = 119/145 (82.07%), Query Frame = 1 
Query:    1 RYVYGTTMQAGRLVLDLADMHQRTTQSYVRRPYGVGMLVAAHDQTGPHLFQTCPSGNYFEYVAMAIGARSQSAKTYLEKHFESFESCDLDELVKHALKALSGCVTGDKELDAQGLTLAIVGKDKVFETLEGEQLQPYMDAIELEG 435
            +YVYGT + +GRLV DLAD HQRTTQSYVRRPYGVG+LVA+ D+ GPH++QTCPSGN +E  A AIGARSQS +TYLEKH ESFE C  D+L+ HALKAL GCV+GD EL  +  ++AIVGKD+ F  +EGE+LQPY+D +ELEG
Sbjct:   96 KYVYGTALPSGRLVTDLADRHQRTTQSYVRRPYGVGLLVASFDKNGPHVYQTCPSGNVYECYATAIGARSQSGRTYLEKHCESFEECSKDDLIMHALKALVGCVSGDGELTRENGSVAIVGKDQKFTLIEGEELQPYLDRLELEG 240
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BLAST of mRNA_H-canaliculatus_F_contig125.2112.1 vs. uniprot
Match: A0A7S2XQH4_9STRA (Proteasome subunit alpha type n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XQH4_9STRA)

HSP 1 Score: 206 bits (523), Expect = 3.320e-60
Identity = 96/146 (65.75%), Postives = 120/146 (82.19%), Query Frame = 1 
Query:    1 RYVYGTTMQAGRLVLDLADMHQRTTQSYVRRPYGVGMLVAAHDQ-TGPHLFQTCPSGNYFEYVAMAIGARSQSAKTYLEKHFESFESCDLDELVKHALKALSGCVTGDKELDAQGLTLAIVGKDKVFETLEGEQLQPYMDAIELEG 435
            +YVYGT M + RLV DLAD HQRTTQ+YVRRPYGVG+LVA++D+ TGPHL+QTCPSGN +EY A AIGARSQS +TYLEKH+ESFE    D+L+ HAL+AL+GCVTGD EL     ++A+VGK + F  +EG++LQPY+D +ELEG
Sbjct:   96 KYVYGTPMPSSRLVTDLADRHQRTTQTYVRRPYGVGLLVASYDEKTGPHLYQTCPSGNIYEYYASAIGARSQSGRTYLEKHYESFEEASKDDLIMHALRALAGCVTGDGELTRDNGSIAVVGKGESFILIEGDELQPYLDRLELEG 241
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BLAST of mRNA_H-canaliculatus_F_contig125.2112.1 vs. uniprot
Match: A0A6S9F1R3_9STRA (Proteasome subunit alpha type n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9F1R3_9STRA)

HSP 1 Score: 206 bits (523), Expect = 3.860e-60
Identity = 92/145 (63.45%), Postives = 119/145 (82.07%), Query Frame = 1 
Query:    1 RYVYGTTMQAGRLVLDLADMHQRTTQSYVRRPYGVGMLVAAHDQTGPHLFQTCPSGNYFEYVAMAIGARSQSAKTYLEKHFESFESCDLDELVKHALKALSGCVTGDKELDAQGLTLAIVGKDKVFETLEGEQLQPYMDAIELEG 435
            +YVYGT M +GRL+ DLAD HQRTTQ+YVRRPYGVG+LVA++D+ GPHL+QTCPSGN +EY A AIGARSQS +TYLEKH+E+      D+L+ HAL+AL+GCV+GD EL     ++A+VGKD+ F  +EG++LQPY+D +ELEG
Sbjct:   96 KYVYGTPMPSGRLLTDLADKHQRTTQTYVRRPYGVGLLVASYDKNGPHLYQTCPSGNLYEYYASAIGARSQSGRTYLEKHYETLNDASRDDLIMHALRALTGCVSGDVELTKDNGSIAVVGKDEKFTLIEGDELQPYLDRLELEG 240
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BLAST of mRNA_H-canaliculatus_F_contig125.2112.1 vs. uniprot
Match: A0A7S2RSW0_9STRA (Proteasome subunit alpha type n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RSW0_9STRA)

HSP 1 Score: 202 bits (514), Expect = 6.840e-59
Identity = 91/145 (62.76%), Postives = 120/145 (82.76%), Query Frame = 1 
Query:    1 RYVYGTTMQAGRLVLDLADMHQRTTQSYVRRPYGVGMLVAAHDQTGPHLFQTCPSGNYFEYVAMAIGARSQSAKTYLEKHFESFESCDLDELVKHALKALSGCVTGDKELDAQGLTLAIVGKDKVFETLEGEQLQPYMDAIELEG 435
            +YVYGT+M +GRLV DLAD HQRTTQ+YVRRPYGVG+LVA++D++GPHL+QTCPSGN +EY A AIGARSQS +TYLEK +++      D+L+ HAL+A+SGCV+GD EL  +  ++A+VGKD  F  +EG++LQPY+D +ELEG
Sbjct:   96 KYVYGTSMPSGRLVTDLADRHQRTTQTYVRRPYGVGLLVASYDKSGPHLYQTCPSGNLYEYYASAIGARSQSGRTYLEKIYDNVADASRDDLIMHALRAISGCVSGDGELTRENGSIAVVGKDDKFTLIEGDELQPYLDRLELEG 240
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BLAST of mRNA_H-canaliculatus_F_contig125.2112.1 vs. uniprot
Match: A0A7S3GRX0_9STRA (Proteasome subunit alpha type n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GRX0_9STRA)

HSP 1 Score: 200 bits (509), Expect = 2.720e-58
Identity = 96/166 (57.83%), Postives = 130/166 (78.31%), Query Frame = 1 
Query:    1 RYVYGTTMQAGRLVLDLADMHQRTTQSYVRRPYGVGMLVAAHDQTGPHLFQTCPSGNYFEYVAMAIGARSQSAKTYLEKHFESFESCDLDELVKHALKALSGCVTGDKELDAQGLTLAIVGKDKVFETLEGEQLQPYMDAIELEGNAAQPMDEGGVEEEKVPAPDV 498
            +YVYGT +Q  RLVLDLADMHQ+ TQSYVRRPYGVG+LV  +DQTGPHL+ T PSGNY+EY AMAIG+RSQ+++TYLEK FESF +  LD+L+KHALKAL+  + GD ELD++  ++++VG ++ F+ +EG  LQ Y+DA+ +EG   Q M+    +EE++  PD+
Sbjct:   96 KYVYGTPIQGSRLVLDLADMHQKCTQSYVRRPYGVGLLVGTYDQTGPHLYLTEPSGNYYEYYAMAIGSRSQTSRTYLEKEFESFGNASLDDLIKHALKALAASLAGDSELDSKNASISMVGANQAFQIIEGPALQKYLDAVAVEGE--QEME----QEEEMEVPDL 255
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BLAST of mRNA_H-canaliculatus_F_contig125.2112.1 vs. uniprot
Match: A0A4D9CTI6_9STRA (Proteasome subunit alpha type n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CTI6_9STRA)

HSP 1 Score: 200 bits (509), Expect = 3.910e-58
Identity = 96/146 (65.75%), Postives = 118/146 (80.82%), Query Frame = 1 
Query:    1 RYVYGTTMQAGRLVLDLADMHQRTTQSYVRRPYGVGMLVAAHDQTGPHLFQTCPSGNYFEYVAMAIGARSQSAKTYLEKHFESFESCDLDELVKHALKALSGCVTGDKELDAQGLTLAIVGKDKVFETLEGEQLQPYMDAIELEGN 438
            +YVYG+ +QA RLVLD+AD HQR TQSYVRRPYGVG+L+A++DQTGPHL+QT PSG Y+EY+A AIG+R+QS KTYLEK+   FES   DEL+KHALKALSG   GDKEL     ++A+VGKD   E +EGE LQ Y+DAIE+EG+
Sbjct:   96 KYVYGSALQASRLVLDVADKHQRCTQSYVRRPYGVGLLIASYDQTGPHLYQTDPSGAYYEYIAQAIGSRAQSGKTYLEKYHAEFESLGQDELIKHALKALSG-TAGDKELSKDNASVAVVGKDHPLEIIEGEALQRYLDAIEVEGD 240
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BLAST of mRNA_H-canaliculatus_F_contig125.2112.1 vs. uniprot
Match: A0A1V9Z6U9_9STRA (Proteasome subunit alpha type n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z6U9_9STRA)

HSP 1 Score: 199 bits (506), Expect = 6.140e-58
Identity = 88/143 (61.54%), Postives = 116/143 (81.12%), Query Frame = 1 
Query:    1 RYVYGTTMQAGRLVLDLADMHQRTTQSYVRRPYGVGMLVAAHDQTGPHLFQTCPSGNYFEYVAMAIGARSQSAKTYLEKHFESFESCDLDELVKHALKALSGCVTGDKELDAQGLTLAIVGKDKVFETLEGEQLQPYMDAIEL 429
            ++VYG+ M   RLV D+AD  Q  TQSYVRRPYGVG+LVA  D+TGPHLFQTCPSGNY+EY A+AIGARSQSA+TYLEKHF++F +CD +EL+KHAL+ + GC+ GD+EL    + +A+VG ++ F  +EG +LQPY+DA+E+
Sbjct:   97 KFVYGSAMSVARLVADVADKKQECTQSYVRRPYGVGLLVAGVDKTGPHLFQTCPSGNYYEYNAIAIGARSQSARTYLEKHFQTFANCDKEELIKHALEGIRGCLEGDQELSIANIAVAVVGLNEAFHVIEGTKLQPYIDAVEV 239
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BLAST of mRNA_H-canaliculatus_F_contig125.2112.1 vs. uniprot
Match: W7TFX4_9STRA (Proteasome subunit alpha n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TFX4_9STRA)

HSP 1 Score: 201 bits (512), Expect = 2.100e-57
Identity = 99/162 (61.11%), Postives = 125/162 (77.16%), Query Frame = 1 
Query:    1 RYVYGTTMQAGRLVLDLADMHQRTTQSYVRRPYGVGMLVAAHDQTGPHLFQTCPSGNYFEYVAMAIGARSQSAKTYLEKHFESFESCDLDELVKHALKALSGCVTGDKELDAQGLTLAIVGKDKVFETLEGEQLQPYMDAIELEGNAAQP-MDEGGVEEEKV 483
            +YVYG+ +QA RLV+D+AD HQR TQSYVRRPYGVG+L+A++DQTGPHL+QT PSG Y+EY+A AIG+R+QS KTYLEK+   FES   DEL+KHALKALSG   GDKEL     ++A+VGKD   E +EGE LQ Y+DAIE+EG+     +D G + +E V
Sbjct:   96 KYVYGSALQASRLVVDVADKHQRCTQSYVRRPYGVGLLIASYDQTGPHLYQTDPSGAYYEYIAQAIGSRAQSGKTYLEKYHAEFESLGQDELIKHALKALSG-TAGDKELSKDNASVAVVGKDHPLEIIEGEALQRYLDAIEVEGDTGDTCLDYGSISQEVV 256
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig125.2112.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LID9_ECTSI3.610e-10493.49Proteasome subunit alpha type n=2 Tax=Ectocarpus T... [more]
A0A836CE23_9STRA3.060e-7066.67Proteasome subunit alpha type n=1 Tax=Tribonema mi... [more]
A0A6U3ZK57_9STRA4.500e-6267.59Proteasome subunit alpha type n=1 Tax=Skeletonema ... [more]
A0A7S2XQH4_9STRA3.320e-6065.75Proteasome subunit alpha type n=1 Tax=Attheya sept... [more]
A0A6S9F1R3_9STRA3.860e-6063.45Proteasome subunit alpha type n=1 Tax=Ditylum brig... [more]
A0A7S2RSW0_9STRA6.840e-5962.76Proteasome subunit alpha type n=1 Tax=Eucampia ant... [more]
A0A7S3GRX0_9STRA2.720e-5857.83Proteasome subunit alpha type n=1 Tax=Spumella elo... [more]
A0A4D9CTI6_9STRA3.910e-5865.75Proteasome subunit alpha type n=1 Tax=Nannochlorop... [more]
A0A1V9Z6U9_9STRA6.140e-5861.54Proteasome subunit alpha type n=1 Tax=Thraustothec... [more]
W7TFX4_9STRA2.100e-5761.11Proteasome subunit alpha n=1 Tax=Nannochloropsis g... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig125contigH-canaliculatus_F_contig125:155..3358 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score305.1
Seed ortholog evalue2e-80
Seed eggNOG ortholog2880.D8LID9
Preferred namePSMA1
KEGG koko:K02725,ko:K13141
KEGG Pathwayko03050,map03050
KEGG ModuleM00337,M00340
GOsGO:0000003,GO:0000502,GO:0001530,GO:0001673,GO:0001703,GO:0002682,GO:0002683,GO:0002861,GO:0002862,GO:0003006,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005813,GO:0005815,GO:0005829,GO:0005839,GO:0005844,GO:0005856,GO:0005886,GO:0005911,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0006996,GO:0006997,GO:0007088,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007286,GO:0007289,GO:0007290,GO:0007291,GO:0007346,GO:0007349,GO:0007369,GO:0007370,GO:0008150,GO:0008152,GO:0008289,GO:0009056,GO:0009057,GO:0009506,GO:0009653,GO:0009790,GO:0009896,GO:0009987,GO:0010004,GO:0010498,GO:0010499,GO:0010564,GO:0010638,GO:0010965,GO:0012505,GO:0015630,GO:0016020,GO:0016043,GO:0016579,GO:0019538,GO:0019773,GO:0019941,GO:0019953,GO:0022412,GO:0022414,GO:0030054,GO:0030071,GO:0030154,GO:0030163,GO:0031331,GO:0031347,GO:0031348,GO:0031597,GO:0031974,GO:0031981,GO:0032101,GO:0032102,GO:0032270,GO:0032436,GO:0032501,GO:0032502,GO:0032504,GO:0032991,GO:0033043,GO:0033044,GO:0033045,GO:0033047,GO:0034515,GO:0036211,GO:0042175,GO:0042221,GO:0043073,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043632,GO:0043687,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044703,GO:0045732,GO:0045787,GO:0045840,GO:0045842,GO:0045862,GO:0045931,GO:0046685,GO:0048232,GO:0048468,GO:0048515,GO:0048518,GO:0048519,GO:0048522,GO:0048583,GO:0048585,GO:0048598,GO:0048609,GO:0048646,GO:0048856,GO:0048869,GO:0050727,GO:0050728,GO:0050776,GO:0050777,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051130,GO:0051247,GO:0051603,GO:0051704,GO:0051726,GO:0051781,GO:0051783,GO:0051785,GO:0051983,GO:0051984,GO:0055044,GO:0062033,GO:0065007,GO:0070013,GO:0070646,GO:0070647,GO:0071704,GO:0071840,GO:0071944,GO:0080134,GO:0090068,GO:0097159,GO:0097367,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901800,GO:1901970,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902099,GO:1902101,GO:1902494,GO:1903052,GO:1903364,GO:1905368,GO:1905369,GO:1905818,GO:1905820,GO:1990904,GO:2001252
EggNOG free text desc.threonine-type endopeptidase activity
EggNOG OGsCOG0638@1,KOG0863@2759
EC3.4.25.1
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01002,ko03041,ko03051,ko04147
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionNucleophile aminohydrolases, N-terminal
Ec32 orthologEc-18_004030.1
Exons4
Model size1264
Cds size489
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig125.2112.1prot_H-canaliculatus_F_contig125.2112.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig125 176..2604 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928964.7473416-UTR-H-canaliculatus_F_contig125:154..1751622928964.7473416-UTR-H-canaliculatus_F_contig125:154..175Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig125 155..175 +
1696845632.4279432-UTR-H-canaliculatus_F_contig125:154..1751696845632.4279432-UTR-H-canaliculatus_F_contig125:154..175Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig125 155..175 +
1622928964.8368814-UTR-H-canaliculatus_F_contig125:2604..33581622928964.8368814-UTR-H-canaliculatus_F_contig125:2604..3358Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig125 2605..3358 +
1696845632.4893038-UTR-H-canaliculatus_F_contig125:2604..33581696845632.4893038-UTR-H-canaliculatus_F_contig125:2604..3358Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig125 2605..3358 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928964.7692554-CDS-H-canaliculatus_F_contig125:175..4091622928964.7692554-CDS-H-canaliculatus_F_contig125:175..409Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig125 176..409 +
1696845632.4470892-CDS-H-canaliculatus_F_contig125:175..4091696845632.4470892-CDS-H-canaliculatus_F_contig125:175..409Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig125 176..409 +
1622928964.7844703-CDS-H-canaliculatus_F_contig125:1013..11241622928964.7844703-CDS-H-canaliculatus_F_contig125:1013..1124Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig125 1014..1124 +
1696845632.458019-CDS-H-canaliculatus_F_contig125:1013..11241696845632.458019-CDS-H-canaliculatus_F_contig125:1013..1124Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig125 1014..1124 +
1622928964.8052588-CDS-H-canaliculatus_F_contig125:1956..20701622928964.8052588-CDS-H-canaliculatus_F_contig125:1956..2070Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig125 1957..2070 +
1696845632.4677224-CDS-H-canaliculatus_F_contig125:1956..20701696845632.4677224-CDS-H-canaliculatus_F_contig125:1956..2070Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig125 1957..2070 +
1622928964.8199577-CDS-H-canaliculatus_F_contig125:2574..26041622928964.8199577-CDS-H-canaliculatus_F_contig125:2574..2604Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig125 2575..2604 +
1696845632.4802566-CDS-H-canaliculatus_F_contig125:2574..26041696845632.4802566-CDS-H-canaliculatus_F_contig125:2574..2604Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig125 2575..2604 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig125.2112.1

>prot_H-canaliculatus_F_contig125.2112.1 ID=prot_H-canaliculatus_F_contig125.2112.1|Name=mRNA_H-canaliculatus_F_contig125.2112.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=163bp
MQAGRLVLDLADMHQRTTQSYVRRPYGVGMLVAAHDQTGPHLFQTCPSGN
YFEYVAMAIGARSQSAKTYLEKHFESFESCDLDELVKHALKALSGCVTGD
KELDAQGLTLAIVGKDKVFETLEGEQLQPYMDAIELEGNAAQPMDEGGVE
EEKVPAPDVGMA*
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mRNA from alignment at H-canaliculatus_F_contig125:155..3358+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig125.2112.1 ID=mRNA_H-canaliculatus_F_contig125.2112.1|Name=mRNA_H-canaliculatus_F_contig125.2112.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3204bp|location=Sequence derived from alignment at H-canaliculatus_F_contig125:155..3358+ (Hapterophycus canaliculatus Oshoro5f female)
AGGTACGTGTACGGGACCACAATGCAGGCCGGCCGCTTGGTCCTGGACCT
CGCGGACATGCACCAAAGGACCACCCAGAGCTACGTACGGCGGCCGTACG
GCGTGGGCATGCTGGTAGCGGCTCACGATCAGACAGGGCCGCACCTGTTC
CAGACGTGCCCCAGTGGCAACTACTTCGAGTACGTGGCCATGGCCATCGG
CGCGAGATCGCAGTCGGCCAAGACCTACCTCGAAAAGCACTTCGAGTCCT
TCGAGGTACGACGCAAAGAGGAGAGAGACGCTGTCTTTTCTGTCTACCTT
CCTGGGTGCTCGTCGTGCGGCCAGGAAAAGCGCCGCGGTTCTTGATGGAT
ACCCACACGATTTGGATTCGGAAGAGATACACACCTAATTTTGCACAAGG
TTTTGCTTTCGTCTTCATCCTGAAACTTGAAGTGGTAAAGGTTAGGTTTC
CTTGCCAGTCAATTTTCGGGTGAAACATAACCGTACACACAACCACATTA
TTCGAAGTAATAAATTGTACTATTTGAGGAATGGTGTTCCCTTCGCTGCT
CCTTCTACGGCCAGCTGACGTCCCTCTTCGTGCTTGTTGCGAAGACAACC
GTAGCAGGCAGATCCTGGCGGCCGGCTGGGCAATGTTGCCCCGTTCTATC
GTCCTCACTGGCCGAGGGGGCCTCCGTGCCCGGGGGGTGCGGCCGTTGAT
GCGCCACCGTTCTTTCCACGCTTGTCTCTTGTCGCGGGAGTCGACTTCTA
CCGCACGGGTCGTGGTACTCTTTTGTCTCGTCATCTCGCACACGCGCCGA
CGCGTCGTTTTGTTCGTTCCCATCTTGGCCGGGTGTTGCTGTCCTTCCCG
CGGGGGCAGAGCTGCGACCTAGACGAGTTGGTGAAGCACGCGCTGAAGGC
GTTATCCGGCTGCGTCACGGGGGACAAGGAGCTTGACGCTCAGGGGCTCA
CCCTCGCCATCGTGGGCAAGGTGAACAAGCTCGTGGAAACCGTTTGACCA
AGCCGTCGACAGCCTTGTCCCTGGCTGCACACAGCTGCGTGTCGGGTTAG
CGCCCCTCGTCTTATCGCAGGTTATGGCGTTTTTGTAGACGATTCTTGGT
CCTGCGCAGCCCCGCCCATGAGTAACGCCTGCAGGCCTAGTCGTTGTGTG
CTCACACGAGGTTTCCATTTGTTGTGTGAGTAGAGGTGGGCACCGGCAGC
CCCCCCCCAAAAAAAAACGGATAGGAGGCGTTATTCTTAGAAATATTAGA
CCGATATCGTTTTTTTTGTCCGGTTCAAACGGTTTTCTGATAACCGTTTT
TACCTGATCACAAGAGGTAAACGCCTCCAAAGTGTTGAAGTGCAGCCAGA
TATGTCACTTTGGGTTGTGAGGTCTGCAAACACTCGAGCTGGCTTTGTAT
ACAATTCACGGTCTTCTCATGCAAGGGTCCAGATAAAGCCTCATTTTCCG
GTTATTTGTAAAGCGGTTATCGACAAACCGGTTCAGAAAAGCACCCGCTT
TTTTTTATTTTAGCACCGGAACCGGTGAACGCCTGCTGGAACTCCAAAAA
ACCGTTTCTTTGTTTTTTAGAACCGAAACCGGTAGACGCCTACTGGGTTT
CCAAAAACCAGTTATAACCGGTTGTTTTGCCGCCGATGCCCACCTCTGTG
TGTGAGGTGCTCGCGGCTGAAAGGTCGCCGCCCATTTTTGGCGGCGAATC
GTTCGATAGCGAGTGACGAAGATGGCGATTGATCTGTCCCACGTCGCTTC
CTCATGGATATATTTCACACGTCCGCATTTGGCCCTTGGCCTGCCCGAGC
AGGACAAAGTGTTCGAGACGCTGGAAGGCGAGCAGTTGCAACCTTACATG
GACGCCATCGAGCTGGAAGGGAACGCGGCGCAACCCATGGACGAGGGCGG
CGTGGAGGAGGAAAAGGTGCGCCCACATCTCCTCGATCCTGTTGTGTGGT
GCTCTCCCGCCCCCTCGCACATTTGCGGTGCACGTTTGCGTCGCTCTGTC
ATCTTTCGGTGCTGGGTTCACTGGCGATTTCAATTTCATTTCTGTTTTCC
ATTTCTGCTTGCTGCGCGGAGCGCCTTTTTTGGCTGTCGCTCTCGGCCAC
AACGATATACCATGACGTATTATGAGGAAAGGTAACTCCAATTTAATGGG
TGTCGCTCAAGCGCCGGCCTTGAAATCAAGGGCCACAACCTCAGGGTGTC
GCCGGATAACCATATTCAATCCCCACCCGCCCTCGCGCCCCGCCCCCTGC
GATGAGAATGCGATCTATTCCGGTGCCGGACGAATGTCGTTTCACCTTTT
TACTCTCGCTGAGCCTTTGATGTGCGTACGTTTGCTGCCCTTCACCGAGT
CATTACTCCGTTGAAGAGTCTTTGGGTATCTGATGCCGCTCCTGCTCATC
CCCCCTTGACACTTGTTCAGGTGCCAGCTCCGGATGTGGGCATGGCATGA
ACGGTGTAACACCTTGATCGCGAACCAACGAGTTTTTCCAGCCCTCAGTC
AGGGAGCTGATCTACTTCGCACTGCGCTCGCGGAAATAGTCGTCGCCGTG
TTCGAATTTTCGTCACGAGAGGGGAACGCGAGGACGTTACTGTAGCAACG
GTCTGCAGTGCCTTTAGGGTGGAGTGAACGTGGTGAGGCCAGGGTCACGG
AGAGGTATCGGCCTCCGACTGCTCGGCGGTGGATTCGCGGTGATGGGGTT
TCCCTACCTCCACCCCACTTCGTTCGATCTTGGCTCGGATCGAGGAAAGA
ACGCGAGCGGCTTGTCCGGTGGGGGGAGGGTAGCGGTGTAGGCCACGGTC
TTCGTGCGTCGACTTACCCGACGCTTTCTGGTTTGGCTCATGTATCCGTT
CACGATGCTCCAAGGGCGAAAAGTGTGCGGGTGGTCGAGGGCATGTTTTC
GCCCAGGGCAAAGAGGGGCCACGAAGGCGACGGGGCGCGGGCTCGCTTTA
GTTTTGCTTGTGACCGGAACATGAAGGAGTGCCCTGTCTGTGGCCAAGTA
CGTGGTGGCTTGTGCAAGGCTTGTACAACTTCGGCGATTTGCGTAGGTGA
CGGCAAGCGCCGAATGCGGTGCACGGTTCTCGAGCGAAGCCGCACTTCCC
GATCGCCCAAGAGAAATAGCTCTCATTGCTCACTTGTCGCCAACTGCCAT
CTTCGGAGAGGAGTCAGTCTGAGCACTACATGTGGCGTCAGCGCAGATAA
ATCC
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig125:155..3358+

>mRNA_H-canaliculatus_F_contig125.2112.1 ID=mRNA_H-canaliculatus_F_contig125.2112.1|Name=mRNA_H-canaliculatus_F_contig125.2112.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=978bp|location=Sequence derived from alignment at H-canaliculatus_F_contig125:155..3358+ (Hapterophycus canaliculatus Oshoro5f female)
ATGCAGGCCGGCCGCTTGGTCCTGGACCTCGCGGACATGCACCAAAGGAC
CACCCAGAGCTACGTACGGCGGCCGTACGGCGTGGGCATGCTGGTAGCGG
CTCACGATCAGACAGGGCCGCACCTGTTCCAGACGTGCCCCAGTGGCAAC
TACTTCGAGTACGTGGCCATGGCCATCGGCGCGAGATCGCAGTCGGCCAA
GACCTACCTCGAAAAGCACTTCGAGTCCTTCGAGATGCAGGCCGGCCGCT
TGGTCCTGGACCTCGCGGACATGCACCAAAGGACCACCCAGAGCTACGTA
CGGCGGCCGTACGGCGTGGGCATGCTGGTAGCGGCTCACGATCAGACAGG
GCCGCACCTGTTCCAGACGTGCCCCAGTGGCAACTACTTCGAGTACGTGG
CCATGGCCATCGGCGCGAGATCGCAGTCGGCCAAGACCTACCTCGAAAAG
CACTTCGAGTCCTTCGAGAGCTGCGACCTAGACGAGTTGGTGAAGCACGC
GCTGAAGGCGTTATCCGGCTGCGTCACGGGGGACAAGGAGCTTGACGCTC
AGGGGCTCACCCTCGCCATCGTGGGCAAGAGCTGCGACCTAGACGAGTTG
GTGAAGCACGCGCTGAAGGCGTTATCCGGCTGCGTCACGGGGGACAAGGA
GCTTGACGCTCAGGGGCTCACCCTCGCCATCGTGGGCAAGGACAAAGTGT
TCGAGACGCTGGAAGGCGAGCAGTTGCAACCTTACATGGACGCCATCGAG
CTGGAAGGGAACGCGGCGCAACCCATGGACGAGGGCGGCGTGGAGGAGGA
AAAGGACAAAGTGTTCGAGACGCTGGAAGGCGAGCAGTTGCAACCTTACA
TGGACGCCATCGAGCTGGAAGGGAACGCGGCGCAACCCATGGACGAGGGC
GGCGTGGAGGAGGAAAAGGTGCCAGCTCCGGATGTGGGCATGGCATGAGT
GCCAGCTCCGGATGTGGGCATGGCATGA
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