mRNA_H-canaliculatus_F_contig12499.2111.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig12499.2111.1 vs. uniprot
Match: D8LMF4_ECTSI (EsV-1-166 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMF4_ECTSI) HSP 1 Score: 207 bits (528), Expect = 1.010e-59 Identity = 149/255 (58.43%), Postives = 166/255 (65.10%), Query Frame = 1
Query: 1 TGNSCKHQGYAEFNPSSWPSSCAPTKADWINEAVGQCGDGPAYPEEFWNCADIQITSDGGPAPSPVPAPEVPDMT------EQPVGMPVTSSGPNDDYSMPTYSPEEVEPSSPAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEEEEDREEEEAXXREQTTPAPSDT-PNIATFAPSVPPPLPTHEDCEDPVAGFNQCGGGDDFDGSTCCRAGYECQKMADCYSECRPKENGCSEGWG 744
TGNSCKH+GYAEFNP SWPSSCAP+KADWINE VGQCGDG AYPEEFWNCADI ITSDGGP +P E+ P+ E + S+P XXXXXXXXXXXXXXXXXXXX XXXXXXXXXX E+ E TP S T P +ATFAPSVPPP+ H DCEDPV FNQCGG + +DGSTCCRAGYEC++MA+CYSECRPK++ CSEGWG
Sbjct: 251 TGNSCKHEGYAEFNPESWPSSCAPSKADWINEVVGQCGDGDAYPEEFWNCADISITSDGGPGTAPXXXXXXXXXXXXXXXEEEGTEAPMXXXXXXXXXXXXXXXXEFDDESTPXXXXXXXXXXXXXXXXXXXXXXEPTTPAPVEGDXXXXXXXXXXSMDGEDYXXXXXXXTAELEPATPMDSPTEPIVATFAPSVPPPISDHSDCEDPVGAFNQCGG-EGYDGSTCCRAGYECEEMAECYSECRPKDDRCSEGWG 504
BLAST of mRNA_H-canaliculatus_F_contig12499.2111.1 vs. uniprot
Match: D8LD67_ECTSI (EsV-1-166 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD67_ECTSI) HSP 1 Score: 184 bits (468), Expect = 3.480e-51 Identity = 151/265 (56.98%), Postives = 164/265 (61.89%), Query Frame = 1
Query: 1 TGNSCKHQGYAEFNPSSWPSSCAPTKADWINEAVGQCGDGPAYPEEFWNCADIQITSDGGPAPSPVPAPEVPDMTEQPVGMPVTSSGPNDDYSMPTYSPEEV-----------------EPSSPAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEEEEDREEEEAXXREQTTPAPSDTPNIATFAPSVPPPLPTHEDCEDPVAGFNQCGGGDDFDGSTCCRAGYECQKMADCYSECRPKENGCSEGWG 744
TGNSCKHQGYAEFNP SWPSSCAP+KADWINEAVGQCGDG AYPEEFWNCAD+ ITSDGGP PE P E PV D+ + P+ +P V EP +P+P XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX P+ T DCEDPV F QCGG +DGSTCCRAGYEC+KMADCYSECRP+ + CSEGWG
Sbjct: 244 TGNSCKHQGYAEFNPPSWPSSCAPSKADWINEAVGQCGDGDAYPEEFWNCADVSITSDGGPXXXXXXXPETPQKPEAPV----------DEATEPSPAPTAVVEEYXXXXXXXXXXXHEEPMTPSPTTAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------------XXXXXXXXXXXPVSTDPDCEDPVGAFAQCGGAG-YDGSTCCRAGYECEKMADCYSECRPRGDRCSEGWG 479
BLAST of mRNA_H-canaliculatus_F_contig12499.2111.1 vs. uniprot
Match: D7FP25_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP25_ECTSI) HSP 1 Score: 159 bits (401), Expect = 2.710e-42 Identity = 137/249 (55.02%), Postives = 146/249 (58.63%), Query Frame = 1
Query: 1 TGNSCKHQGYAEFNPSSWPSSCAPTKADWINEAVGQ-CGDGPAYPEEFWNCADIQITSDGGPAPSPVPAPEVPDMTEQPVGMPVTSSGPNDDYSMPTYSPEEVEPSSPAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEEEEDREEEEAXXREQTTPAPSDTPNIATFAPSVPPPLPTHEDCEDPVAGFNQCGGGDDFDGSTCCRAGYECQKMADCYSECRPKENGCSEGWG 744
TGNSCKHQGYAEFNP SWPSSCAP+KADWINE VGQ CGDG AYPEEFWNCAD+ ITSDGGP E P T+ A XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX P+ T DCEDPV F QCGG +DGSTCC AGYEC++MADCYSECRP+ +GCSE WG
Sbjct: 195 TGNSCKHQGYAEFNPPSWPSSCAPSKADWINEIVGQHCGDGDAYPEEFWNCADVSITSDGGPXXXXXXXXETPKETK-------------------------------AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------------------------------------PVSTDPDCEDPVDAFAQCGGAG-YDGSTCCTAGYECEEMADCYSECRPRGDGCSESWG 368
BLAST of mRNA_H-canaliculatus_F_contig12499.2111.1 vs. uniprot
Match: A0A6H5KD35_9PHAE (CBM1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD35_9PHAE) HSP 1 Score: 153 bits (387), Expect = 1.180e-39 Identity = 146/260 (56.15%), Postives = 157/260 (60.38%), Query Frame = 1
Query: 7 NSCKHQGYAEFNPSSWPSSCAPTKADWINEAVGQCGDGPAYPEEFWNCADIQITSDGGPAPSPVPAPEVPDMTEQPVGMPVTSSGPNDDYSMPT-YSPEEVEPSSPAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEEEEDREEEEAXXREQTTPAPSDT-PNIATFAPSVPPPLPTHEDCEDPVAGFNQCGGGDDFDGSTCCRAGYECQKMADCYSE---------CRPKENGCSEGWGQCG 753
NSCKHQGYAEFNP SWP SCAP+KADWI EAVGQCGDG AYPEEFWNCAD+ ITSDGGP +E PV D+ PT XXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX E TP S T P +ATFAPSVPPP+ T DCEDPV AGYEC++MADCYS+ CRP+ + CSEGWGQCG
Sbjct: 215 NSCKHQGYAEFNPPSWPGSCAPSKADWIKEAVGQCGDGDAYPEEFWNCADVSITSDGGPXXXXXXXXXXXXESEAPV----------DELIEPTPXXXXXXXXXXXXXXXXXXXXXXXXMTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAELEPATPMDSPTEPIVATFAPSVPPPVSTDPDCEDPVGA-----------------AGYECEEMADCYSDVQRRQLVESCRPRGDRCSEGWGQCG 447
BLAST of mRNA_H-canaliculatus_F_contig12499.2111.1 vs. uniprot
Match: D8LM92_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM92_ECTSI) HSP 1 Score: 142 bits (357), Expect = 1.790e-34 Identity = 66/82 (80.49%), Postives = 67/82 (81.71%), Query Frame = 1
Query: 1 TGNSCKHQGYAEFNPSSWPSSCAPTKADWINEAVGQCGDGPAYPEEFWNCADIQITSDGGPAPSPV----PAPEVPDMTEQP 234
TGNSCKHQGYAEFNP SWPSSCAPTKADWINE VG CGDG AYPEEFWNCADI ITSDG PAPSP PAP P+ TE P
Sbjct: 246 TGNSCKHQGYAEFNPESWPSSCAPTKADWINEVVGHCGDGDAYPEEFWNCADISITSDGDPAPSPTTVLTPAPTAPEETEPP 327
BLAST of mRNA_H-canaliculatus_F_contig12499.2111.1 vs. uniprot
Match: D8LM93_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM93_ECTSI) HSP 1 Score: 134 bits (337), Expect = 2.010e-33 Identity = 58/63 (92.06%), Postives = 59/63 (93.65%), Query Frame = 1
Query: 1 TGNSCKHQGYAEFNPSSWPSSCAPTKADWINEAVGQCGDGPAYPEEFWNCADIQITSDGGPAP 189
TGNSCKHQGYAEFNP SWPSSCAP+KADWINE VGQCGDG AYPEEFWNCADI ITSDGGPAP
Sbjct: 247 TGNSCKHQGYAEFNPPSWPSSCAPSKADWINEVVGQCGDGDAYPEEFWNCADISITSDGGPAP 309
BLAST of mRNA_H-canaliculatus_F_contig12499.2111.1 vs. uniprot
Match: A0A6H5KTY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTY6_9PHAE) HSP 1 Score: 126 bits (317), Expect = 4.840e-29 Identity = 55/61 (90.16%), Postives = 55/61 (90.16%), Query Frame = 1
Query: 1 TGNSCKHQGYAEFNPSSWPSSCAPTKADWINEAVGQCGDGPAYPEEFWNCADIQITSDGGP 183
TGNSCKHQGYAEFNP SWPSSCAPTKADWINE VG CGDG AYPEEFWNCADI ITSDG P
Sbjct: 246 TGNSCKHQGYAEFNPDSWPSSCAPTKADWINELVGFCGDGDAYPEEFWNCADISITSDGDP 306
BLAST of mRNA_H-canaliculatus_F_contig12499.2111.1 vs. uniprot
Match: D7G4D7_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4D7_ECTSI) HSP 1 Score: 117 bits (293), Expect = 8.230e-27 Identity = 78/251 (31.08%), Postives = 91/251 (36.25%), Query Frame = 1
Query: 1 TGNSCKHQGYAEFNPSSWPSSCAPTKADWINEAVGQCGDGPAYPEEFWNCADIQITSDGGPAPSPVPAPEVPDMTEQPVGMPVTSSGPNDDYSMPTYSPEEVEPSSPAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEEEEDREEEEAXXREQTTPAPSDTPNIATFAPSVPPPLPTHEDCEDPVAGFNQCGGGDDFDGSTCCRAGYECQKMADCYSECRPKENGCSEGWGQCG 753
TGNSCKH GY EF P+SWPS+CAP K DWI CG+ +YPEEFW CAD IT DG P+P P EP + DC DPV ++QCGG +D++GS CCR GYEC +MA CYS+CRP GCSE W QCG
Sbjct: 222 TGNSCKHVGYEEFEPASWPSACAPEKHDWIELDRYLCGENGSYPEEFWACADFAITPDGMANPTPAP----------------------------------TEPLA------------------------------------------------------------------------------------------DCLDPVGPYDQCGG-EDYEGSDCCREGYECTEMASCYSQCRPIPGGCSEDWDQCG 347
BLAST of mRNA_H-canaliculatus_F_contig12499.2111.1 vs. uniprot
Match: D8LM94_ECTSI (Elicitor-inducible LRR receptor-like protein EILP (ISS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM94_ECTSI) HSP 1 Score: 103 bits (256), Expect = 4.330e-24 Identity = 46/70 (65.71%), Postives = 54/70 (77.14%), Query Frame = 1
Query: 535 PNIATFAPSVPPPLPTHEDCEDPVAGFNQCGGGDDFDGSTCCRAGYECQKMADCYSECRPKENGCSEGWG 744
P + TFAPSV PP+ TH DCEDPV FNQCGG ++GS CCR GY+C +MADCYSECRP+ + CSE WG
Sbjct: 7 PIVGTFAPSVAPPVSTHPDCEDPVGAFNQCGGAG-YEGSACCRTGYDCVEMADCYSECRPRGDRCSENWG 75
BLAST of mRNA_H-canaliculatus_F_contig12499.2111.1 vs. uniprot
Match: A0A6H5JI36_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JI36_9PHAE) HSP 1 Score: 100 bits (249), Expect = 3.120e-20 Identity = 49/86 (56.98%), Postives = 55/86 (63.95%), Query Frame = 1
Query: 1 TGNSCKHQGYAEFNPSSWPSSCAPTKADWINEAVGQCGDGPAYPEEFWNCADIQITSD---GGPAP-----------SPVPAPEVP 216
TGN+CKH GY EF+P S P CAPTK DW+ +G CG+ YPEEFWNCADI+ITSD GGPAP SP P P VP
Sbjct: 311 TGNACKHPGYDEFDPVSVPDGCAPTKEDWVQTQLGMCGEDGRYPEEFWNCADIEITSDEDGGGPAPTTPSPTDEEELSPTPEPSVP 396 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12499.2111.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig12499.2111.1 >prot_H-canaliculatus_F_contig12499.2111.1 ID=prot_H-canaliculatus_F_contig12499.2111.1|Name=mRNA_H-canaliculatus_F_contig12499.2111.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=285bp TGNSCKHQGYAEFNPSSWPSSCAPTKADWINEAVGQCGDGPAYPEEFWNCback to top mRNA from alignment at H-canaliculatus_F_contig12499:2308..3599- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig12499.2111.1 ID=mRNA_H-canaliculatus_F_contig12499.2111.1|Name=mRNA_H-canaliculatus_F_contig12499.2111.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1292bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12499:2308..3599- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig12499:2308..3599- >mRNA_H-canaliculatus_F_contig12499.2111.1 ID=mRNA_H-canaliculatus_F_contig12499.2111.1|Name=mRNA_H-canaliculatus_F_contig12499.2111.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1710bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12499:2308..3599- (Hapterophycus canaliculatus Oshoro5f female)back to top |