mRNA_H-canaliculatus_F_contig1019.211.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig1019.211.1
Unique NamemRNA_H-canaliculatus_F_contig1019.211.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1019.211.1 vs. uniprot
Match: UPI001FE582CD (hypothetical protein n=1 Tax=Paenibacillus kobensis TaxID=59841 RepID=UPI001FE582CD)

HSP 1 Score: 59.7 bits (143), Expect = 1.950e-6
Identity = 52/168 (30.95%), Postives = 73/168 (43.45%), Query Frame = 2 
Query:  737 LPEHEQKSDKGSPATSACKRRTVFRSNGGLVSPNGRYTFVQHNDNELVIYDREGGK-IWSCP----GSKAVDVRNPEAEKEMNTVFTEFQHDGALVQYAERKSK-------GWGGQGKEV---------LWRSHSAGPPNGDRLVMQDDGNLVIYNSKTLEVAWESGT 1177
            LP     +++G+  T+A    T F     L+S NG Y  +  +D   VIY    GK +WS      G+              +     +Q+   + +YA R          GWG   K V         +W S++ G   G+ LVMQDDGNLVIYN+ T +  W SGT
Sbjct:   24 LPASAFAANQGNYITNA--NNTSFAKGDYLLSQNGLYKAIWQDDGNFVIYRTYNGKSMWSSSTNGKGANQFXXXXXXXXXXXSNTKVVYQN---VYEYAYRFDPFTGTYAWGWGYTLKPVVVTTTTPVAIWASNTGGTGAGNTLVMQDDGNLVIYNA-TGKALWSSGT 185
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1019.211.1 vs. uniprot
Match: A0A5S5D587_9ACTN (Reprolysin-like metallo-peptidase family M12B n=1 Tax=Blastococcus xanthinilyticus TaxID=1564164 RepID=A0A5S5D587_9ACTN)

HSP 1 Score: 61.2 bits (147), Expect = 8.350e-6
Identity = 41/121 (33.88%), Postives = 56/121 (46.28%), Query Frame = 2 
Query:  824 LVSPNGRYTFVQHNDNELVIYDREGGKIWS----CPGSKAVDVRNPEAEKEMNTVFTEFQHDGALVQYAERKSKGWGGQGKEVLWRSHSAGPPNGDRLVMQDDGNLVIYNSKTLEVAWESG 1174
            L SPNGRY  V  +D   V+Y  +G  +W+     PG++ V                    DG LV  +          G  +LW+S +AG   G R+VMQDDGNLV+Y +     AW +G
Sbjct:  476 LRSPNGRYRAVFQSDGNFVVYAPDGRALWASGVYAPGTQTV-----------------LGADGNLVTVS----------GSRILWQSGTAGNA-GARVVMQDDGNLVLYRANG-SAAWSTG 567
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1019.211.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
UPI001FE582CD1.950e-630.95hypothetical protein n=1 Tax=Paenibacillus kobensi... [more]
A0A5S5D587_9ACTN8.350e-633.88Reprolysin-like metallo-peptidase family M12B n=1 ... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1019contigH-canaliculatus_F_contig1019:975..6845 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons7
Model size2668
Cds size888
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928647.3054585-UTR-H-canaliculatus_F_contig1019:974..12531622928647.3054585-UTR-H-canaliculatus_F_contig1019:974..1253Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1019 975..1253 +
1696845512.0180213-UTR-H-canaliculatus_F_contig1019:974..12531696845512.0180213-UTR-H-canaliculatus_F_contig1019:974..1253Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1019 975..1253 +
1622928647.3198042-UTR-H-canaliculatus_F_contig1019:1665..17141622928647.3198042-UTR-H-canaliculatus_F_contig1019:1665..1714Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1019 1666..1714 +
1696845512.027848-UTR-H-canaliculatus_F_contig1019:1665..17141696845512.027848-UTR-H-canaliculatus_F_contig1019:1665..1714Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1019 1666..1714 +
1622928647.5032284-UTR-H-canaliculatus_F_contig1019:5335..59611622928647.5032284-UTR-H-canaliculatus_F_contig1019:5335..5961Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1019 5336..5961 +
1696845512.087086-UTR-H-canaliculatus_F_contig1019:5335..59611696845512.087086-UTR-H-canaliculatus_F_contig1019:5335..5961Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1019 5336..5961 +
1622928647.5161266-UTR-H-canaliculatus_F_contig1019:6019..68451622928647.5161266-UTR-H-canaliculatus_F_contig1019:6019..6845Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1019 6020..6845 +
1696845512.0963573-UTR-H-canaliculatus_F_contig1019:6019..68451696845512.0963573-UTR-H-canaliculatus_F_contig1019:6019..6845Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1019 6020..6845 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928647.332328-CDS-H-canaliculatus_F_contig1019:1714..18501622928647.332328-CDS-H-canaliculatus_F_contig1019:1714..1850Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1019 1715..1850 +
1696845512.0370665-CDS-H-canaliculatus_F_contig1019:1714..18501696845512.0370665-CDS-H-canaliculatus_F_contig1019:1714..1850Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1019 1715..1850 +
1622928647.346983-CDS-H-canaliculatus_F_contig1019:2286..25291622928647.346983-CDS-H-canaliculatus_F_contig1019:2286..2529Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1019 2287..2529 +
1696845512.0470781-CDS-H-canaliculatus_F_contig1019:2286..25291696845512.0470781-CDS-H-canaliculatus_F_contig1019:2286..2529Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1019 2287..2529 +
1622928647.357573-CDS-H-canaliculatus_F_contig1019:2814..29731622928647.357573-CDS-H-canaliculatus_F_contig1019:2814..2973Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1019 2815..2973 +
1696845512.058104-CDS-H-canaliculatus_F_contig1019:2814..29731696845512.058104-CDS-H-canaliculatus_F_contig1019:2814..2973Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1019 2815..2973 +
1622928647.3709638-CDS-H-canaliculatus_F_contig1019:4376..45891622928647.3709638-CDS-H-canaliculatus_F_contig1019:4376..4589Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1019 4377..4589 +
1696845512.0674412-CDS-H-canaliculatus_F_contig1019:4376..45891696845512.0674412-CDS-H-canaliculatus_F_contig1019:4376..4589Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1019 4377..4589 +
1622928647.381999-CDS-H-canaliculatus_F_contig1019:5198..53351622928647.381999-CDS-H-canaliculatus_F_contig1019:5198..5335Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1019 5199..5335 +
1696845512.0758307-CDS-H-canaliculatus_F_contig1019:5198..53351696845512.0758307-CDS-H-canaliculatus_F_contig1019:5198..5335Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1019 5199..5335 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1019.211.1prot_H-canaliculatus_F_contig1019.211.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig1019 1715..5335 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig1019.211.1

>prot_H-canaliculatus_F_contig1019.211.1 ID=prot_H-canaliculatus_F_contig1019.211.1|Name=mRNA_H-canaliculatus_F_contig1019.211.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=296bp
MMVATLPPQKGERTTSSFFRETRDLPRFEEHGYVSRHVSEKSLEAAWQAR
VRYHNMNGRPRHSKRVLEWNGHYVLYDLHLPPGTSLPVSAMHGGSIAGGS
SSASGTISMNSSRSNSSESSESSGTEGSSTGHEGPPLPEHEQKSDKGSPA
TSACKRRTVFRSNGGLVSPNGRYTFVQHNDNELVIYDREGGKIWSCPGSK
AVDVRNPEAEKEMNTVFTEFQHDGALVQYAERKSKGWGGQGKEVLWRSHS
AGPPNGDRLVMQDDGNLVIYNSKTLEVAWESGTAEEGGPNRIILR*
back to top

mRNA from alignment at H-canaliculatus_F_contig1019:975..6845+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1019.211.1 ID=mRNA_H-canaliculatus_F_contig1019.211.1|Name=mRNA_H-canaliculatus_F_contig1019.211.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=5871bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1019:975..6845+ (Hapterophycus canaliculatus Oshoro5f female)
GACCAGCTTTTCTGGCGTCGTGTGTTGCAAAAATAAGAGGGCACGGCTTG
AGTTTCTGCGGGGTAGACTTGCAGCTCACCAACTGCACAATTCTCGCCCA
CGCAAGATTTTGTCGGGCGACGACTAGTATAGCCTACAGAGAGAGGTCGT
CGCCCCGCCTTTGGAGTTCAGGTCCAGTCCTACGTATACAACGAGTCTCC
ACCAAACTATCATTCGCGCGTTTGGTCTGCATCGGGCTCGCTGGCGTCTC
GAGATCTATGCCCGTGAAGACACATAGAGGTAGAATCGCCAGGCTGCGTA
GATTTTACTAAGTAACAAGTCGCACAATCTCGGTACCGGTACGAGGGATC
TGTATGCCTTTTTCGCAAGTGTTCGATTCTCCCGGCCTGACCTGTCGGGT
ACGTTACGTAATCGTCTGGAAAGTGCCGGTCGGAATACTGATGACCAGCC
AGAGTTAGAAGAACGTCCTGTTGGCCGGTTTTTGTGGAATTTGACGGGGC
GACCCCAACAAGTAACAGGGGGCACAGTGCCGGGATGGCGTTGTACCTTT
TCCTGGCATTTGTTTTCAACCGAAAAGAGTTTCCCACTCGCCCTTTCTCT
GTTTCCTACTCGCCCTTTCTCTGTTTCTGCTCATTCAACTCACAACCCAC
TCCTTCACCTTCCACGTCTGTCTCTCGCTCTTATCGGGAAGTGCGACATC
ACGGAAAATAAAAGGCTCGATAAAAGGAGATCGGTTAGTCATGATGGTCG
CTACGCTTCCGCCCCAGAAGGGAGAGAGGACAACCTCCTCTTTCTTCCGA
GAAACAAGAGACCTACCGCGCTTCGAGGAGCACGGGTACGTGAGCCGTCA
CGTGTCGGAGAAGTCCCTTGAAGCAGGTATGAGCAGCCAACTCTGCATTG
CCCCCCAGCCGGAGCGTGCTTCACCAGCACGTCCGGGTCTTCGGCGTGTT
CACCGTGTTGGCCTCGCAGCAGCGTTTGTTTAATCCACGCGAGGGGTATC
GCACGTGTTCCATCCGCGAGACTCCATCGGACAGAGAGGTGTACTTCCAC
ACACCAGCGTCGCAGTTGCTGTGTGGTTGCACTTCACCTGACGAGACCAT
ATGTATCGTCGTACCATGATCCAGGCTGAGCTAGCAGAACCTTGGAGATT
CTCTTCAACTGTTTCAAGAGAGCAATGCACGATGTGCATCAGGAATCCCA
TTGATTCTCTTCGGCTTTATCTTTCTCTGCGCCATCGTCGTCCTTGCCAA
ACTCGTCGACCCAAGCCACACCAGCCCCATCGCTTACAAGTACTCTGTTC
AACTCCACTCAGCTTGGCAGGCTCGTGTGCGGTACCACAACATGAACGGA
CGTCCCCGGCACAGCAAGCGCGTCCTTGAGTGGAACGGCCACTACGTTCT
GTATGACCTGCACCTCCCGCCGGGTACATCTCTTCCGGTCAGCGCGATGC
ACGGCGGAAGCATCGCTGGCGGCAGTAGTAGCGCTTCAGGCACCATCAGC
ATGAACAGCAGCAGAAGCAACAGCAGCGAAAGCAGCGAAAGCAGCGGGAC
TGAAGGTTGTGATATTGTTGTGACGGCGATGAGATTGAGTTGAGTCAACG
TCTCTGATAGGATGGAAAAGGTTTGCATCGTTGAACCGTCAGAAGAGGTT
TGAACGCGTTCCGCGACATTCAGAGCATTGTTCCCGCTCCAGCGAGGTTC
CTCCAGCAGCGACTGGAGGGCGCGCGTTTCTACCCCGCTCCTAGAAGTGG
CTTGGTCGCTAGAAGGAAGTCGATTGCGTGAAGTCCGGGCGGTCAGCTTG
TGCCTTTTTTTGACTCGTTGCTTCATCGCTGCGCGTGCAGGTAGCTCGAC
TGGGCACGAAGGACCACCGCTCCCGGAACACGAGCAGAAGTCCGACAAGG
GATCGCCGGCGACAAGCGCGTGCAAACGGCGTACTGTTTTCCGCTCCAAC
GGCGGACTTGTGAGTCCTAACGGGCGCTACACGTTCGTGCAGCACAACGG
TGAGTACGCACGTCCTTCGCGCGTTAGAGTAGAACGACCGAAGGAGAATA
ATTCTCAAACATTTCTCCGGCTGCAATTTTGTAGTCTGCGAACCAAGTTG
AAGTGCGGTGAGTTTTCTGGTGTGAAACTACAGACCGCCGTCCACGACAA
AACAAAACTTTGCACGCTGACATCTTTGGGGTTATGAGCGCCGGCTTATG
TGTCGTTGCCGTGTAGCACGAACGAATGTCCTTTAACGCCAGCCGGCGAA
GTACGTGCCCAACCGCACGCCTTGCTGCAGACTGGCGTATCTGGCAACGT
CCAACGCCACTCGTAGACACATCTCTGTACGTGCACCGCGAGGTCGCTTT
TTTGCCGTTTGGTGTGCCGAGAACTACTTGTTATGATCGTGTGACTTAGA
CGTTGGAAATGCTTCTGCACTTCCACCTCCCGCCTCAATACATCAACCGT
TCACTCTACCCTTGCGCAAAGACTTTCCTCGTTGCCAACCCGCCTTTCAC
CAATCCACCGTCAACCTAACACCCGTCGAACGCCCAACAGGTACACTCGC
CGTTGCGATGACGAATTAGGCGAAGAATCATCGAAAACGTTCTCTACCCG
TTATCTCCGCATCTCCACCGCCTTAGGAGGTGCTCCGCCCGTATCTGCTG
ACAAAATCGCGACCCTGCTTCGCCGTCTGAGTGCCTGCCCAGGGTAAAAT
ATTTCACTGCGTTGTCATCTGCCCCTCCTCGTTGCGCTCACGACACCCGT
GGACGGTATCGCGAATAAACGCTCCCGGGAAATGACACGCATTTATGAAC
ATCCCATCAGGGACCTTGCCGCAGCGAAGCGTAGGTCAATGAGCCACACG
TTTTCATATTTTTTACCGGATACGTTTCACGTGTACACTTTTATGCATAG
CCGCCTCCTTGCCGTTTGGTGCGAGAAACATCCCGCTCTGGGTCAGTAGA
AGTCAGCAGGAATAGGCATTAACGAGGTGATGGGGCCGTCCATTGTAGAC
AATGGGAAGATGCCCCGGCCAGCCATAACTAGTCGTTTCTTTCTTTGTGA
GCAAATCAGTCCAAAATACTCTTCCTTCGACACAGCGTCTCATTAGCTTC
AGCCCTCAGAACAATTGCCAACATGTAGTTTCCTCTAAGTCAACCCGGAA
CTCCGAGGGGTCGTTCCAAGCCGATCTCGTTGTTCGGTTTACACCGAAAC
CTTGCCAGCGTTAATGAACCCCCTACCACGGTGCACACATTTATTCTCAT
TCCTGTGTGTACATCTTGCGTCAATTCTCATCCGATGCCACCGACGTCAC
CCTATCTCATGTCCGACGCCGTCCACTGCCCCTCCAAACCTTGATCGGCG
TTTGGACGCGTGTTTCGTTGTTTCCACCTCACTCACGAACCAACCTGAGC
AGACAATGAGCTGGTCATCTACGACAGAGAGGGGGGGAAAATTTGGTCCT
GCCCTGGGTCGAAGGCGGTTGACGTCAGGAACCCCGAGGCGGAGAAGGAG
ATGAACACGGTCTTCACGGAATTCCAGCACGACGGTGCACTCGTGCAGTA
CGCCGAGAGAAAGAGCAAGGGCTGGGGGGGGCAGGGCAAAGAGGTGCTCT
GGCGAAGCCACTCTGGTGAGCCGCAACGAACGTCCCGGAAGCACCATGGG
GCTGGACACTAGCGAACGGCAGTCAATCAGCGACGAACGGACGTAGATTT
GCCAAAGTGCGACAAAACTCACCTAACTTTTCGCCCGTAGCCGCAGCACT
TGGTTGTGGGACCAAATGAGGCAGTAGCTGATGATTGCCAGAAAGGAGAG
TATCGTCTCGCAACCCCCTCTTCCTAGTTGTCTCTGCCGGGAACATAGAG
TGCGTCTCCGATGATTACAAGATAGTAGCCTGTGGAGTGTCAAAGTGTTC
CTCTCCGGAGACGTTGTTGAATTGTCCAGCTAGAAGAAGCGGAGAAACAA
CAGCGGCCGGCCGAGAAACACTCTTCCCATCATGAACTCATCGCCGCAAA
TAGATAGGGTTGTTTTCGCCAGACGCGCACGCCAGCTGGCGAATCACGCA
AGTGCTGTGTGCGTGCGTTTGCTTTTCCTCACAAGTTCGTGCTGAAGTGG
GCCACTCTCACGCAGCGAAAATATTGGCATCTCAAGCCACTATGATTGAA
GAATAGTTCGAAAGTAATAATTTTTTCATCCCTTCTTGTTTGACTTGGTT
CGACCAACACGCTCCTGTCGACAGCAGGTCCGCCGAATGGCGATCGTCTG
GTGATGCAAGACGACGGCAACCTGGTCATTTACAATTCCAAGACACTGGA
AGTGGCGTGGGAGTCGGGAACCGCCGAAGAAGGGGGACCCAACCGCATCA
TCCTGAGATGACACCGACGCATACTTACCAGGAAGTGAAAACAGATCCTG
ACTGTTGGGCGAAGGAAGATATCGTCGTCGCAACTTCCATGTCCGTCAAG
CTCTCATCGGTCGCTAGACCCTTTTTTTTTTCTTTTTTTTTGAGTGAGAA
TTAATAAAGTTCTCAACTTCGTACTGTCCTCTCCAAAGGCTTGACCCTAA
AAGGCGGCACAGATTTCAGGAACTCCGGTTGTGTTTGATTCATGCGGAAA
GTCGCAGCACAACACAGGTACATGGTGGTTGAGAAAGCATCTTCTCCTGG
CACACGTAGTGAGTCGCGTTTATATTAATTAACAAGATTTTCGCTTTCCG
CTGGCATTAGGTAATACATGCAGATATATATCAATAACAACATTCACCAT
TTGACGGGAAATTCGATAGATAGATTCATTGAAGGCCTGCCTTGATTGGA
GTGCCGATCATGTTTGGTTGTGCCTATTTCTGTTCTACGTGCCCCGAGGC
TGCCCCGAGGCTGTGGTTCCCATCCTCCACCTGGTGGGTTTCATGCAAAA
AAAAAGAATGTTTCTAGCTGAGTATTCAGGGAATACTTGATCAATAGGAG
ATATTCATACTTGATCTGTTGGGTGGTTGGTCATTTTGTTTTTTCGCCAG
TTCGCTCGGGTCTTGTTATTGTCTTCATGAGAGAACAAACGAAAGGTTTG
TTTTTGCCATGCACAAAGACTCGTACAACGGACGGTCGAGGAATCACTTT
CACACAACGATTTCTGTAGATGACGACGGAACGGTCCATTGTTTGATTAT
TTAACAGGCTACCCCTTGAATTGGCCCGGACTCTGTAACATAGACGGAAA
AAGGGCCGAAAAATCGAGTTGCCGAATGGTTCTCCGCAGGCGTTTTTCGT
TCGGCCATCGGATGGCATTTTCGAAGTCCTCAACGAAGCATGGCATCGCT
GGGCAATTTTCGATACTTGGTTGGTGTTTCCAGGGGGTTGTTAAAAGCTG
ATCTACTGGTTCGGTTGTGTCATCCAATCCATAGCAAAGTACGGGCTACC
TTTGAGGGTTAAAGGCGTCATTGTGTGTTGGTGCTATGTTCGTTGTCCTG
ACAGCATTTAGACGTCGGTGACGTCGCAATTTTTGTTGTTTGTCTAGTTG
GTTGACATATTGATTTGTCGATCGGCTGGTTGCCTTGTTGGTTCTTTGTT
TTGAAGGGTGTTTAGGTGGGGGTTCGTCCGCTTGTAATGTGGCCGTCCGT
CCGTCCGGTCGTTCGTTCGTCCATTGGTTCGTCCCTCCGGCCGTTACGTT
AGTCTGTTCGCGCGGCGGTTGGACGGTTGGTTACTGTCGTTCAAGTCGTT
GCCTACTTAATTTCAAGTGAGCCTGCGCACGGTCATGGTCGCTCAACTGA
AAATCGTTGGCTTCTTGGCCGTCGCAGACGACCCGACCCGCCCGCTCTCC
GTACCCTTATATTTATTCACGGTTTTTGAGAAAGCCGCAGGGCGTCCATG
CTCGTACACGCTCATATGGTA
back to top

Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1019:975..6845+

>mRNA_H-canaliculatus_F_contig1019.211.1 ID=mRNA_H-canaliculatus_F_contig1019.211.1|Name=mRNA_H-canaliculatus_F_contig1019.211.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1776bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1019:975..6845+ (Hapterophycus canaliculatus Oshoro5f female)
ATGATGGTCGCTACGCTTCCGCCCCAGAAGGGAGAGAGGACAACCTCCTC
TTTCTTCCGAGAAACAAGAGACCTACCGCGCTTCGAGGAGCACGGGTACG
TGAGCCGTCACGTGTCGGAGAAGTCCCTTGAAGCAGATGATGGTCGCTAC
GCTTCCGCCCCAGAAGGGAGAGAGGACAACCTCCTCTTTCTTCCGAGAAA
CAAGAGACCTACCGCGCTTCGAGGAGCACGGGTACGTGAGCCGTCACGTG
TCGGAGAAGTCCCTTGAAGCAGCTTGGCAGGCTCGTGTGCGGTACCACAA
CATGAACGGACGTCCCCGGCACAGCAAGCGCGTCCTTGAGTGGAACGGCC
ACTACGTTCTGTATGACCTGCACCTCCCGCCGGGTACATCTCTTCCGGTC
AGCGCGATGCACGGCGGAAGCATCGCTGGCGGCAGTAGTAGCGCTTCAGG
CACCATCAGCATGAACAGCAGCAGAAGCAACAGCAGCGAAAGCAGCGAAA
GCAGCGGGACTGAAGCTTGGCAGGCTCGTGTGCGGTACCACAACATGAAC
GGACGTCCCCGGCACAGCAAGCGCGTCCTTGAGTGGAACGGCCACTACGT
TCTGTATGACCTGCACCTCCCGCCGGGTACATCTCTTCCGGTCAGCGCGA
TGCACGGCGGAAGCATCGCTGGCGGCAGTAGTAGCGCTTCAGGCACCATC
AGCATGAACAGCAGCAGAAGCAACAGCAGCGAAAGCAGCGAAAGCAGCGG
GACTGAAGGTAGCTCGACTGGGCACGAAGGACCACCGCTCCCGGAACACG
AGCAGAAGTCCGACAAGGGATCGCCGGCGACAAGCGCGTGCAAACGGCGT
ACTGTTTTCCGCTCCAACGGCGGACTTGTGAGTCCTAACGGGCGCTACAC
GTTCGTGCAGCACAACGGTAGCTCGACTGGGCACGAAGGACCACCGCTCC
CGGAACACGAGCAGAAGTCCGACAAGGGATCGCCGGCGACAAGCGCGTGC
AAACGGCGTACTGTTTTCCGCTCCAACGGCGGACTTGTGAGTCCTAACGG
GCGCTACACGTTCGTGCAGCACAACGACAATGAGCTGGTCATCTACGACA
GAGAGGGGGGGAAAATTTGGTCCTGCCCTGGGTCGAAGGCGGTTGACGTC
AGGAACCCCGAGGCGGAGAAGGAGATGAACACGGTCTTCACGGAATTCCA
GCACGACGGTGCACTCGTGCAGTACGCCGAGAGAAAGAGCAAGGGCTGGG
GGGGGCAGGGCAAAGAGGTGCTCTGGCGAAGCCACTCTGACAATGAGCTG
GTCATCTACGACAGAGAGGGGGGGAAAATTTGGTCCTGCCCTGGGTCGAA
GGCGGTTGACGTCAGGAACCCCGAGGCGGAGAAGGAGATGAACACGGTCT
TCACGGAATTCCAGCACGACGGTGCACTCGTGCAGTACGCCGAGAGAAAG
AGCAAGGGCTGGGGGGGGCAGGGCAAAGAGGTGCTCTGGCGAAGCCACTC
TGCAGGTCCGCCGAATGGCGATCGTCTGGTGATGCAAGACGACGGCAACC
TGGTCATTTACAATTCCAAGACACTGGAAGTGGCGTGGGAGTCGGGAACC
GCCGAAGAAGGGGGACCCAACCGCATCATCCTGAGATGACAGGTCCGCCG
AATGGCGATCGTCTGGTGATGCAAGACGACGGCAACCTGGTCATTTACAA
TTCCAAGACACTGGAAGTGGCGTGGGAGTCGGGAACCGCCGAAGAAGGGG
GACCCAACCGCATCATCCTGAGATGA
back to top