prot_H-canaliculatus_F_contig1249.2105.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1249.2105.1
Unique Nameprot_H-canaliculatus_F_contig1249.2105.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length281
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1249.2105.1 vs. uniprot
Match: A0A6H5L9N5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L9N5_9PHAE)

HSP 1 Score: 419 bits (1076), Expect = 1.590e-145
Identity = 216/247 (87.45%), Postives = 231/247 (93.52%), Query Frame = 0 
Query:   32 AMDKSQALVKWAGGEAAATGVSAAMVAVGITTLVAPAVAVIVLVGHVFVRGSIRSVKKKLKVRADQKAHLEQLKLTETTAPSASGHFTVVLNGKGPNGEFNGFVAPNDNNSYKPVSSGHLKGISKLISGSTNCNVRDMGGFTEDAPTPFAVRISMPDVLALMRQSWVYERFCQTKCGSRTVVVLRSKHSRGKDKLRVTWENSGSLDYTKAQVYTEREWKKTKFAGKTKTMPEGIADVDMALDKTLVF 278
            A+D+SQA+VKWAGGEAA+TGVSAAMVA GITTLVAP VAVIVLVGHV VRGSIR+VKKKLKVRA+QKAHLEQL LTETTA S+SGHFTVVLNG GPNGEFN +V+PND+ SY+ VS GHLKGISKLISG+TNCNVRDMGG+TE A  PF VRISMPDVLALMRQSWVYERFCQTKCG+ TVVVLRS+HSRGKDKLRV WENSGSLDYTKAQVYTEREWKKTKFAGKTKTMPEGIADVDMALDKTLVF
Sbjct:   48 AVDRSQAIVKWAGGEAASTGVSAAMVAAGITTLVAPTVAVIVLVGHVIVRGSIRAVKKKLKVRAEQKAHLEQLNLTETTARSSSGHFTVVLNGVGPNGEFNSYVSPNDDASYRAVSPGHLKGISKLISGATNCNVRDMGGYTEGAAVPFCVRISMPDVLALMRQSWVYERFCQTKCGTMTVVVLRSQHSRGKDKLRVAWENSGSLDYTKAQVYTEREWKKTKFAGKTKTMPEGIADVDMALDKTLVF 294
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1249.2105.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L9N5_9PHAE1.590e-14587.45Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 81..280
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..53
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 54..80
NoneNo IPR availableTMHMMTMhelixcoord: 58..80

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1249contigH-canaliculatus_F_contig1249:10824..17063 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1249.2105.1mRNA_H-canaliculatus_F_contig1249.2105.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1249 10730..19040 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1249.2105.1 ID=prot_H-canaliculatus_F_contig1249.2105.1|Name=mRNA_H-canaliculatus_F_contig1249.2105.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=281bp
MASAAGEEYDSDVEASSASGAEEEDKRMKKQAMDKSQALVKWAGGEAAAT
GVSAAMVAVGITTLVAPAVAVIVLVGHVFVRGSIRSVKKKLKVRADQKAH
LEQLKLTETTAPSASGHFTVVLNGKGPNGEFNGFVAPNDNNSYKPVSSGH
LKGISKLISGSTNCNVRDMGGFTEDAPTPFAVRISMPDVLALMRQSWVYE
RFCQTKCGSRTVVVLRSKHSRGKDKLRVTWENSGSLDYTKAQVYTEREWK
KTKFAGKTKTMPEGIADVDMALDKTLVFSD*
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