prot_H-canaliculatus_F_contig12460.2088.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-canaliculatus_F_contig12460.2088.1
Unique Name	prot_H-canaliculatus_F_contig12460.2088.1
Type	polypeptide
Organism	Hapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length	250

Homology

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BLAST of mRNA_H-canaliculatus_F_contig12460.2088.1 vs. uniprot
Match: D7FW82_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW82_ECTSI)

HSP 1 Score: 116 bits (290), Expect = 7.890e-26
Identity = 83/199 (41.71%), Postives = 112/199 (56.28%), Query Frame = 0

Query:   10 SSAEKSPWFKEGTLVVLNCGRGSKP-GAPHPTVPIEDLLGRTARVIRAPEPHMKASPGYHLVEFQRWEGGPDAVVKLKTRARFLKPAHVK----PSVASSPETDVVTTAAGSVNAAAAGISAGVQKTSAAKGAXXXXXXXXNAPKGSRMSTRPRRMSARVALKAVKRSGSVEREEAGDEQKPPAVAGIKRGKWRRKEEV 203
            S+  KS W+ +GT+VVL+C   ++     +P +P+ DLLGR ARVIR  EP  +    YHLVEFQ WEGGPD VV L+ +A+ LKPA +     P+V S      V+T  GS +A  +  +A  + T A  GA         A      +TRPRR S R A+KA K+S SV+  EAG EQ P A A + + + +  EE 
Sbjct:  527 STDVKSSWYSKGTMVVLHCDSPAQVRSTSNPVLPLSDLLGRPARVIR--EPTHRMGQRYHLVEFQPWEGGPDTVVTLRAKAKLLKPAPLDSVFAPAVVSDGRDSGVSTDGGSASARLS--TARAESTPAGAGAAQRVSRKTVA------ATRPRRRSTRGAIKATKQSVSVDAGEAGCEQPPLATARVVKREGKGNEEA 715

The following BLAST results are available for this feature:

BLAST of mRNA_H-canaliculatus_F_contig12460.2088.1 vs. uniprot

BLAST of mRNA_H-canaliculatus_F_contig12460.2088.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7FW82_ECTSI	7.890e-26	41.71	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 215..239

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-canaliculatus_F_contig12460	contig	H-canaliculatus_F_contig12460:142..1635 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female	2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90	2022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-canaliculatus_F_contig12460.2088.1	mRNA_H-canaliculatus_F_contig12460.2088.1	Hapterophycus canaliculatus Oshoro5f female	mRNA	H-canaliculatus_F_contig12460 142..1635 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-canaliculatus_F_contig12460.2088.1 ID=prot_H-canaliculatus_F_contig12460.2088.1|Name=mRNA_H-canaliculatus_F_contig12460.2088.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=250bp
AGEDKQHVLSSAEKSPWFKEGTLVVLNCGRGSKPGAPHPTVPIEDLLGRT
ARVIRAPEPHMKASPGYHLVEFQRWEGGPDAVVKLKTRARFLKPAHVKPS
VASSPETDVVTTAAGSVNAAAAGISAGVQKTSAAKGAGAGEGAAQNAPKG
SRMSTRPRRMSARVALKAVKRSGSVEREEAGDEQKPPAVAGIKRGKWRRK
EEVGGGDEMEVDDDDDEEEEEQEEEEEEYQKEEDEDDDDDEDEQEKQEHQ